BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0835100 Os03g0835100|011-087-G07
(745 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0835100 Similar to Chloroplast protein import componen... 1467 0.0
Os05g0151400 Chloroplast protein import component Toc86/159... 714 0.0
Os10g0548800 Similar to Chloroplast outer envelope protein-... 520 e-147
Os12g0197400 GTP-binding protein, HSR1-related domain conta... 424 e-118
Os01g0356800 AIG1 domain containing protein 337 2e-92
AK107288 131 2e-30
Os03g0240500 Similar to Toc34-2 protein 124 2e-28
>Os03g0835100 Similar to Chloroplast protein import component Toc159
Length = 745
Score = 1467 bits (3799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 709/745 (95%), Positives = 709/745 (95%)
Query: 1 MAKVFPIESSVPLQVPPTTVSVPRKNVASSPVLEVAPNPDNEMTEEERKLYRKVDVARIK 60
MAKVFPIESSVPLQVPPTTVSVPRKNVASSPVLEVAPNPDNEMTEEERKLYRKVDVARIK
Sbjct: 1 MAKVFPIESSVPLQVPPTTVSVPRKNVASSPVLEVAPNPDNEMTEEERKLYRKVDVARIK 60
Query: 61 YLRLIHRLGYDTEHHIAIQVLYRLSLVEGFRRIKVANHSSELESAWKKALQLEAEGTEDL 120
YLRLIHRLGYDTEHHIAIQVLYRLSLVEGFRRIKVANHSSELESAWKKALQLEAEGTEDL
Sbjct: 61 YLRLIHRLGYDTEHHIAIQVLYRLSLVEGFRRIKVANHSSELESAWKKALQLEAEGTEDL 120
Query: 121 EFSCNVLVLGKTGVGKSATINSIFGEDKSKTSAFLPATTAVKEISGVVGGVKFRVVDTPG 180
EFSCNVLVLGKTGVGKSATINSIFGEDKSKTSAFLPATTAVKEISGVVGGVKFRVVDTPG
Sbjct: 121 EFSCNVLVLGKTGVGKSATINSIFGEDKSKTSAFLPATTAVKEISGVVGGVKFRVVDTPG 180
Query: 181 LGTTHMDEKSNRKVLNSVKKYIKRCPPDVVLYVDRIDTQRQDANNLSLLQCITSVLGSSI 240
LGTTHMDEKSNRKVLNSVKKYIKRCPPDVVLYVDRIDTQRQDANNLSLLQCITSVLGSSI
Sbjct: 181 LGTTHMDEKSNRKVLNSVKKYIKRCPPDVVLYVDRIDTQRQDANNLSLLQCITSVLGSSI 240
Query: 241 WSKTIITLTHSAAAPPEGPSGIPLNYEMFVTQRTHAIQQSIRQATNDPRFENTSALVENH 300
WSKTIITLTHSAAAPPEGPSGIPLNYEMFVTQRTHAIQQSIRQATNDPRFENTSALVENH
Sbjct: 241 WSKTIITLTHSAAAPPEGPSGIPLNYEMFVTQRTHAIQQSIRQATNDPRFENTSALVENH 300
Query: 301 HLCRRNTEGEKVLPNGLIWXXXXXXXCYSVKTVETNSLSARVASPANLFSLRFRMPPLPH 360
HLCRRNTEGEKVLPNGLIW CYSVKTVETNSLSARVASPANLFSLRFRMPPLPH
Sbjct: 301 HLCRRNTEGEKVLPNGLIWRRLLLLLCYSVKTVETNSLSARVASPANLFSLRFRMPPLPH 360
Query: 361 FLSSLLQSREHPRCAADQDVGDIDPDELINEDEEDDYDQLPPFKPLSKSQVAKLSKEQQK 420
FLSSLLQSREHPRCAADQDVGDIDPDELINEDEEDDYDQLPPFKPLSKSQVAKLSKEQQK
Sbjct: 361 FLSSLLQSREHPRCAADQDVGDIDPDELINEDEEDDYDQLPPFKPLSKSQVAKLSKEQQK 420
Query: 421 LYFDEYDYRTXXXXXXXXXXXXXXXXXMKIEGNNHDVLGDNDNPDDEYETERSVMPDWAL 480
LYFDEYDYRT MKIEGNNHDVLGDNDNPDDEYETERSVMPDWAL
Sbjct: 421 LYFDEYDYRTKLLEKKQLKEQLRRLKEMKIEGNNHDVLGDNDNPDDEYETERSVMPDWAL 480
Query: 481 PSSFDSDDPAYRYRCLDPKPNFLVRAITNPDGWDHDCGFDGVSLQYSLDAANAFPASLWV 540
PSSFDSDDPAYRYRCLDPKPNFLVRAITNPDGWDHDCGFDGVSLQYSLDAANAFPASLWV
Sbjct: 481 PSSFDSDDPAYRYRCLDPKPNFLVRAITNPDGWDHDCGFDGVSLQYSLDAANAFPASLWV 540
Query: 541 QVNKDKRESTIHLVSSISAKHRENVSSLAGFDIQTIMDQLAYTLRGEXXXXXXXXXXXXG 600
QVNKDKRESTIHLVSSISAKHRENVSSLAGFDIQTIMDQLAYTLRGE G
Sbjct: 541 QVNKDKRESTIHLVSSISAKHRENVSSLAGFDIQTIMDQLAYTLRGESKFKNSKKNTTTG 600
Query: 601 GLSMTFLGDTMVTGAKFEDKLSVGDRLTLLANTGAVSIRGDTAYGVNMEATLREKDYLMG 660
GLSMTFLGDTMVTGAKFEDKLSVGDRLTLLANTGAVSIRGDTAYGVNMEATLREKDYLMG
Sbjct: 601 GLSMTFLGDTMVTGAKFEDKLSVGDRLTLLANTGAVSIRGDTAYGVNMEATLREKDYLMG 660
Query: 661 QDLAILGASLVRWHKEWSMAAKLDSQFSMGRASNVAVHVDLTNKLTGRVSIKANTSEQLK 720
QDLAILGASLVRWHKEWSMAAKLDSQFSMGRASNVAVHVDLTNKLTGRVSIKANTSEQLK
Sbjct: 661 QDLAILGASLVRWHKEWSMAAKLDSQFSMGRASNVAVHVDLTNKLTGRVSIKANTSEQLK 720
Query: 721 IALLGVCSMTMYLWNRMHPFIDRNY 745
IALLGVCSMTMYLWNRMHPFIDRNY
Sbjct: 721 IALLGVCSMTMYLWNRMHPFIDRNY 745
>Os05g0151400 Chloroplast protein import component Toc86/159 family protein
Length = 1306
Score = 714 bits (1844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/752 (51%), Positives = 495/752 (65%), Gaps = 27/752 (3%)
Query: 9 SSVPLQVPPTTVSVPRKNVASSPVLEVAPNPDNEMTEEERKLYRKVDVARIKYLRLIHRL 68
SS P P V R N+ S L V P EMTEEE+KL+ KV++ R+K+LRL++RL
Sbjct: 554 SSAPSLRPTVPRPVARSNLFSPSELAVTAEPTEEMTEEEKKLHDKVELIRVKFLRLVYRL 613
Query: 69 GYDTEHHIAIQVLYRLSLVEGFRRIKVANHSSELESAWKKALQLEAEGTEDLEFSCNVLV 128
G E +A QVLYRLSL EG R + N + L++A KKA+ LEAEG E+L FSCN+LV
Sbjct: 614 GATPEETVAAQVLYRLSLAEGIRHGRQTNRAFSLDNARKKAMLLEAEGKEELNFSCNILV 673
Query: 129 LGKTGVGKSATINSIFGEDKSKTSAFLPATTAVKEISGVVGGVKFRVVDTPGLGTTHMDE 188
LGK GVGKSATINSIFGE+KSKT AF AT +V+EI G V GV+ R++DTPGL MD+
Sbjct: 674 LGKIGVGKSATINSIFGEEKSKTDAFSSATNSVREIVGNVDGVQIRIIDTPGLRPNVMDQ 733
Query: 189 KSNRKVLNSVKKYIKRCPPDVVLYVDRIDTQRQDANNLSLLQCITSVLGSSIWSKTIITL 248
SNRK+L SVKKY KRCPPD+VLYVDR+D+ +D N+L LL+ ITSVLGSSIW I+ L
Sbjct: 734 GSNRKILASVKKYTKRCPPDIVLYVDRLDSLSRDLNDLPLLKTITSVLGSSIWFNAIVAL 793
Query: 249 THSAAAPPEGPSGIPLNYEMFVTQRTHAIQQSIRQATNDPRFENTSALVENHHLCRRNTE 308
TH+A+APPEG +G P+ YE+ + QR+H IQQSIRQA D R N ALVENH CRRN E
Sbjct: 794 THAASAPPEGLNGAPMTYEVLMAQRSHIIQQSIRQAAGDMRLMNPVALVENHPSCRRNRE 853
Query: 309 GEKVLPNGLIWXXXXXXXCYSVKTV-ETNS-LSARVASPANLFSLRFRMPPLPHFLSSLL 366
G+KVLPNG W CYS K + E NS L + +P LF RFR PPLP LSSLL
Sbjct: 854 GQKVLPNGQSWRHQMLLLCYSSKILSEANSLLKLQDPNPGKLFGFRFRSPPLPFLLSSLL 913
Query: 367 QSREHPRCAADQDVGDIDPDELINEDEEDDYD------------QLPPFKPLSKSQVAKL 414
QSR HP+ + DQ + D D + DDY QLPPFKPL+KSQ+A+L
Sbjct: 914 QSRAHPKLSPDQGGNEGDSDIDL-----DDYSDIEQDEDEEEYDQLPPFKPLTKSQLARL 968
Query: 415 SKEQQKLYFDEYDYRTXXXXXXXXXXXXXXXXXMKIEGNNH-------DVLGDNDNPDDE 467
+KEQ+ YFDEYDYR MK G ++ G+ND D
Sbjct: 969 TKEQKNAYFDEYDYRVKLLQKKQWKDEIRRLKEMKKRGKTDMDAYGYANIAGENDL-DPP 1027
Query: 468 YETERSVMPDWALPSSFDSDDPAYRYRCLDPKPNFLVRAITNPDGWDHDCGFDGVSLQYS 527
E +PD LP SFD D+P YRYR L+P L R + + GWDHDCG+DGVS++ +
Sbjct: 1028 PENVSVPLPDMVLPPSFDCDNPTYRYRFLEPTSTVLARPVLDAHGWDHDCGYDGVSVEET 1087
Query: 528 LDAANAFPASLWVQVNKDKRESTIHLVSSISAKHRENVSSLAGFDIQTIMDQLAYTLRGE 587
L N FPA++ VQV KDK+E +IHL SSISAK E+ SSLAGFDIQT+ QLAY LRGE
Sbjct: 1088 LALLNKFPANMAVQVTKDKKEFSIHLDSSISAKLGEDASSLAGFDIQTVGRQLAYILRGE 1147
Query: 588 XXXXXXXXXXXXGGLSMTFLGDTMVTGAKFEDKLSVGDRLTLLANTGAVSIRGDTAYGVN 647
GG S+TFLGD + TG K ED+LS+G RL L+A+TGA+ +GDTAYG N
Sbjct: 1148 TKFKNIKKNKTTGGFSVTFLGDIVATGLKVEDQLSLGKRLALVASTGAMRAQGDTAYGAN 1207
Query: 648 MEATLREKDYLMGQDLAILGASLVRWHKEWSMAAKLDSQFSMGRASNVAVHVDLTNKLTG 707
+EA L++KDY +GQ L+ LG SL++W ++ ++ A L SQFS+GR S + V + L NKL+G
Sbjct: 1208 LEARLKDKDYPIGQSLSTLGLSLMKWRRDLALGANLQSQFSIGRGSKMVVRLGLNNKLSG 1267
Query: 708 RVSIKANTSEQLKIALLGVCSMTMYLWNRMHP 739
+++++ +TSEQ++IALLG+ + ++ P
Sbjct: 1268 QITVRTSTSEQVQIALLGLIPVAASIYRSFRP 1299
>Os10g0548800 Similar to Chloroplast outer envelope protein-like (Chloroplast
outer envelope membrane-associated protein Toc120)
Length = 1008
Score = 520 bits (1339), Expect = e-147, Method: Compositional matrix adjust.
Identities = 301/699 (43%), Positives = 424/699 (60%), Gaps = 14/699 (2%)
Query: 42 EMTEEERKLYRKVDVARIKYLRLIHRLGYDTEHHIAIQVLYRLSLVEGFRRIKVANHSSE 101
E +E ++ K+ + R+K+LRL +R G + + QVLYRL L E RR
Sbjct: 303 EDGDENDEIREKLQMIRVKFLRLANRFGQTPNNMVVSQVLYRLGLAEQLRR-NTGQGVFS 361
Query: 102 LESAWKKALQLEAEGTEDLEFSCNVLVLGKTGVGKSATINSIFGEDKSKTSAFLPATTAV 161
+ A A +LEA G E L+FSC +LVLGKTGVGKSATINSIF + + +T+AF +T V
Sbjct: 362 FDRAQDMAERLEAAGNEPLDFSCTILVLGKTGVGKSATINSIFDDVRLETNAFDTSTRKV 421
Query: 162 KEISGVVGGVKFRVVDTPGLGTTHMDEKSNRKVLNSVKKYIKRCPPDVVLYVDRIDTQRQ 221
+E+ G V G+K +V+DTPGL + D+ N+K+LNSVK+ I R PPD+VLY DR+D Q +
Sbjct: 422 QEVVGAVEGIKVKVIDTPGLSCSSSDQHHNQKILNSVKRLISRNPPDIVLYFDRLDMQTR 481
Query: 222 DANNLSLLQCITSVLGSSIWSKTIITLTHSAAAPPEGPSGIPLNYEMFVTQRTHAIQQSI 281
D ++ LLQ IT V G+SIW I+ LTH+A+APP+G +GIPL+YEMFVTQR+H +QQ+I
Sbjct: 482 DYGDVPLLQTITRVFGASIWFNAIVVLTHAASAPPDGLNGIPLSYEMFVTQRSHVVQQAI 541
Query: 282 RQATNDPRFENTSALVENHHLCRRNTEGEKVLPNGLIWXXXXXXXCYSVKTV-ETNSLSA 340
RQA D R N +LVENH CR N G++VLPNG +W C++ K + E N+L
Sbjct: 542 RQAAGDVRLMNPVSLVENHSACRTNRAGQRVLPNGHVWKPQLLLLCFASKVLAEANALLK 601
Query: 341 RVASPANLFSLRFRMPPLPHFLSSLLQSREHPRCAADQ----DVGDIDPDELINEDEEDD 396
+PA R R+PPLP LSSLLQSR + +Q D + D + + D+ D
Sbjct: 602 LQDNPAG--KPRMRIPPLPFLLSSLLQSRAPLKLPEEQFGDDDDIEDDLADDSDSDDGSD 659
Query: 397 YDQLPPFKPLSKSQVAKLSKEQQKLYFDEYDYRTXXXXXXXXXXXXXXXXXMKIEGNNHD 456
YD LPPFK L+K+Q+AKL+ Q+K Y +E DYR MK
Sbjct: 660 YDDLPPFKRLTKAQLAKLNHAQRKAYLEELDYREKLFYKKQLKEERMRRKIMKKMAAEAS 719
Query: 457 VLGD---NDNPDDEYETERSV---MPDWALPSSFDSDDPAYRYRCLDPKPNFLVRAITNP 510
D N N +D+ +V MPD LPSSFDSD P++RYR LD +LVR +
Sbjct: 720 ARTDDFSNSNLEDDGSAPTNVAVPMPDMVLPSSFDSDHPSHRYRFLDTPSEWLVRPVLET 779
Query: 511 DGWDHDCGFDGVSLQYSLDAANAFPASLWVQVNKDKRESTIHLVSSISAKHRENVSSLAG 570
GWDHD G++G++++ P S+ Q++KDK++ ++ + + S KH E ++ G
Sbjct: 780 QGWDHDVGYEGLNVERLFAVKGKVPLSVSGQLSKDKKDCSLQMEVASSLKHGEGKTTSLG 839
Query: 571 FDIQTIMDQLAYTLRGEXXXXXXXXXXXXGGLSMTFLGDTMVTGAKFEDKLSVGDRLTLL 630
D+Q++ +AYTLRGE G+S T LGD++ G K EDKL V +L +L
Sbjct: 840 LDLQSVGKDMAYTLRGESRFKNFRRNNTAAGISATLLGDSVSAGVKVEDKLVVNKQLRVL 899
Query: 631 ANTGAVSIRGDTAYGVNMEATLREKDYLMGQDLAILGASLVRWHKEWSMAAKLDSQFSMG 690
+ GA+S RGD AYG +EATL++KDY +G+ L+ + S+V WH + ++ + SQ G
Sbjct: 900 VSGGAMSGRGDVAYGGRLEATLKDKDYPIGRMLSTIALSVVDWHGDLAVGCNIQSQIPAG 959
Query: 691 RASNVAVHVDLTNKLTGRVSIKANTSEQLKIALLGVCSM 729
RASN+ H +L+NK TG+V I+ N+SE L+IAL+ + +
Sbjct: 960 RASNLIGHANLSNKGTGQVGIRLNSSEHLEIALIALVPI 998
>Os12g0197400 GTP-binding protein, HSR1-related domain containing protein
Length = 785
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 269/759 (35%), Positives = 397/759 (52%), Gaps = 56/759 (7%)
Query: 7 IESSVPLQVPPTTVSVPRKNVASSPVLEVAPNPDNEMTEEERKLYRKVDVARIKYLRLIH 66
+E+ + P + V SSP E PD++ T+ + + V+ +IK+LRL+H
Sbjct: 48 VETVSANRFPSNDIRASDSEVTSSPSYE----PDHDSTKSDP--LKHVEALQIKFLRLVH 101
Query: 67 RLGYDTEHHIAIQVLYRLSLVEGFRRIKVANHSSE-----LESAWKKALQLEAEGTEDLE 121
R G + QVLYRL L IK S+ + A A + EA G DL+
Sbjct: 102 RTGVPPTTDVVAQVLYRLHLAN---LIKAGESDSKRTNLAINKARVIAAEQEAPGGPDLD 158
Query: 122 FSCNVLVLGKTGVGKSATINSIFGEDKSKTSAFLPATTAVKEISGVVGGVKFRVVDTPGL 181
+L+LGKTGVGKSATINSIF E K T+A PAT ++ I G + G++ V+DTPGL
Sbjct: 159 LPLRILLLGKTGVGKSATINSIFDEPKVATNALAPATERIRRIDGTIKGIRVTVIDTPGL 218
Query: 182 GTTHMDEKSNRKVLNSVKKYIKRCPPDVVLYVDRIDTQRQDANNLSLLQCITSVLGSSIW 241
+ ++ NRK+L++VK++IKR PPD+VLY +R+D LL+ IT +LGSS+W
Sbjct: 219 LPHYHRQRKNRKILHAVKRFIKRSPPDIVLYFERLDHINSRYCEYPLLKLITDILGSSMW 278
Query: 242 SKTIITLTHSAAAPPEGPSGIPLNYEMFVTQRTHAIQQSIRQATNDPRFENTSALVENHH 301
T++ +TH +++PPEGP G PL Y+ + + +Q+ I+ A ++ + EN LV+NH
Sbjct: 279 FNTVLVMTHCSSSPPEGPDGYPLEYDSYARYCKNVVQRHIQVAASNTQMENPVVLVDNHP 338
Query: 302 LCRRNTEGEKVLPNGLIWXXXXXXXCYSVKTV-ETNSLSARVASPANLFSLRFRMPPLPH 360
+CRRNT+GE+VLPNG +W C + K + E NSL L+F+
Sbjct: 339 MCRRNTKGERVLPNGKVWVSELLLLCGATKLLAEANSL------------LKFQ----DS 382
Query: 361 FLSSLLQSREHPR------------CAADQDVGDIDPDELINEDEEDDYDQLPPFKPLSK 408
FL S +R + +DVG ID E+ D+ED+ DQLPPF+ L K
Sbjct: 383 FLLSQANTRLPSLPHLLSSLLKPNPSSRSEDVG-IDMTEV--SDDEDESDQLPPFRVLKK 439
Query: 409 SQVAKLSKEQQKLYFDEYDYRTXXXXXXXXXXXXXXXXXMKIEGNNHDVLGDNDNPDDEY 468
S+ KLSKEQ+ Y DE DYR +E N D ++ D+Y
Sbjct: 440 SEYEKLSKEQRSAYLDELDYRETLYLKKQWKEGIRRQKL--VEAQNVDA---SNAVGDDY 494
Query: 469 ETERSV----MPDWALPSSFDSDDPAYRYRCLDPKPNFLVRAITNPDGWDHDCGFDGVSL 524
E S M D +PSSFDSD P +RYR L + + R + +P GWDHD GFDG++
Sbjct: 495 EESVSPEVVHMSDMEIPSSFDSDYPVHRYRYL-ITDDMVFRPVLDPQGWDHDIGFDGINF 553
Query: 525 QYSLDAANAFPASLWVQVNKDKRESTIHLVSSISAKHRENVSSLAGFDIQTIMDQLAYTL 584
+ S D AS+ Q+ KDK + I S+S + S + ++QT L T+
Sbjct: 554 EVSQDLEKNTTASIAGQMRKDKEDLYIQSECSVSYSGKNGRSLIGSMNMQTANKDLVCTV 613
Query: 585 RGEXXXXXXXXXXXXGGLSMTFLGDTMVTGAKFEDKLSVGDRLTLLANTGAVSIRGDTAY 644
G+ GG+S+T G TGAK ED ++VG R+ L+ N G + G A+
Sbjct: 614 NGDARFHNLPWNTTGGGISITKFGSKYFTGAKLEDSITVGRRVQLVGNAGRMVGCGQVAH 673
Query: 645 GVNMEATLREKDYLMGQDLAILGASLVRWHKEWSMAAKLDSQFSMGRASNVAVHVDLTNK 704
G +E T R KDY + ++ + A+ + + KE ++ L S F MGR S V+V +L ++
Sbjct: 674 GGGLEMTFRGKDYPVREESITVAATALSFEKETVISTNLQSDFRMGRGSKVSVSANLNSR 733
Query: 705 LTGRVSIKANTSEQLKIALLGVCSMTMYLWNRMHPFIDR 743
GR +K +TS+ +IAL+ ++ + R D+
Sbjct: 734 NLGRFCVKTSTSDHSEIALVAAVTLFQFFLRRRTASTDK 772
>Os01g0356800 AIG1 domain containing protein
Length = 5436
Score = 337 bits (865), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 228/704 (32%), Positives = 346/704 (49%), Gaps = 147/704 (20%)
Query: 43 MTEEERKLYRKVDVARIKYLRLIHRLGYDT-----EHHIAIQVLYRLSLVEGFRRIKVAN 97
+T++++KL++K+++ K+L L+ R+G +T +HH
Sbjct: 4858 VTKKDKKLHQKLELITEKFLNLLSRMGANTMDFNLDHH---------------------- 4895
Query: 98 HSSELESAWKKALQLEAEGTEDLEFSCNVLVLGKTGVGKSATINSIFGEDKSKTSAFLPA 157
K+ Q + +DL FSCN+LVLGK GVGKS INSI GE+K+K +AF A
Sbjct: 4896 --------HHKSSQQYHDNQKDLSFSCNILVLGKIGVGKSTVINSIMGEEKNKINAFDGA 4947
Query: 158 TTAVKEISGVVGGVKFRVVDTPGLGTTHMDEKSNRKVLNSVKKYIKRCPPDVVLYVDRID 217
TT V+ +S VV G+K ++DTPGL T MD+ N+K+L++V Y K+CPPD++LYVDR+D
Sbjct: 4948 TTNVRLVSSVVDGIKVNIIDTPGLRTNVMDQGWNKKILSTVNSYTKKCPPDIILYVDRLD 5007
Query: 218 TQRQDANNLSLLQCITSVLGSSIWSKTIITLTHSAAAPPEGPSGIPLNYEMFVTQRTHAI 277
+ +++ LL+ IT++LG+SIW T++T TH+ + PP+ +G P+ YE F+ QR+H +
Sbjct: 5008 SWSNHFDDIPLLKTITTILGTSIWVNTVVTFTHANSIPPDNSNGDPMTYETFIAQRSHIV 5067
Query: 278 QQSIRQATNDPRFENTSALVENHHLCRRNTEGEKVLPNGLIWXXXXXXXCYSVKTVETNS 337
QQSI+QAT D N + VEN+ C+RN +G+KVLP W CYS K
Sbjct: 5068 QQSIQQATGDMCLINAFSFVENYLYCKRNCQGKKVLPTIQNWRKYLLILCYSTKP----- 5122
Query: 338 LSARVASPANLFSLRFRMPPLPHFLSSLLQSREHPRCAADQDVGDIDPDELINEDEEDDY 397
+++ H H D + D E+ D+E +Y
Sbjct: 5123 --------------KYQPKASIH----------HKGLKEDSSIEVDDYSEVC--DDEYEY 5156
Query: 398 DQLPPFKPLSKSQVAKLSKEQQKLYFDEYDYRTXXXXXXXXXXXXXXXXXMKIEGNNHDV 457
QLP PL K+Q +L K++ K DE Y M+ G
Sbjct: 5157 GQLPTLWPLMKAQFDELMKDKNK---DECAYHV------------KLIQGMQFNGVTQGS 5201
Query: 458 L-GDND-NPDDEYETER-SVMPDWALPSSFDSDD-PAYRYRCLDPKPNFLVRAITNPDGW 513
+ DND NP + R S + + + SFD DD P ++Y L+P + + W
Sbjct: 5202 MPCDNDLNP---LQKNRMSPILNMVIEPSFDFDDPPTHQYNLLEPTSIITRKHVLGAHTW 5258
Query: 514 DHDCGFDGVSLQYSL---DAANAFPASLWVQVNKDKRESTIHLVSSISAKHRENVSSLAG 570
DH+ FDG SL+ +L F A+L V+ +KD ++S IH SS +KH ++ S G
Sbjct: 5259 DHEYNFDGASLEKTLVLHKPTKCFEATL-VEFSKDMKKSRIHFNSSFRSKHVDDASHCLG 5317
Query: 571 FDIQTIMDQLAYTLRGEXXXXXXXXXXXXGGLSMTFLGDTMVTGAKFEDKLSVGDRLTLL 630
++IQ +LAY + GE GGLS+ FLGDTM+TG K ED +SVG
Sbjct: 5318 YNIQNAWKKLAYCIWGE-TTTKDTKHKTVGGLSVMFLGDTMLTGVKIEDYISVG------ 5370
Query: 631 ANTGAVSIRGDTAYGVNMEATLREKDYLMGQDLAILGASLVRWHKEWSMAAKLDSQFSMG 690
+ LA+L L+R H
Sbjct: 5371 ------------------------------ESLALLSQYLLRRH---------------- 5384
Query: 691 RASNVAVHVDLTNKLTGRVSIKANTSEQLKIALLGVCSMTMYLW 734
S +A+H+ L G++++K +TS+ ++IALLG+ + ++
Sbjct: 5385 --SKMALHIGLNTLRNGQINLKMSTSKMVQIALLGLVPLATSMY 5426
>AK107288
Length = 189
Score = 131 bits (329), Expect = 2e-30, Method: Composition-based stats.
Identities = 66/179 (36%), Positives = 108/179 (60%), Gaps = 1/179 (0%)
Query: 556 SISAKHRENVSSLAGFDIQTIMDQLAYTLRGEXXXXXXXXXXXXGGLSMTFLGDTMVTGA 615
+ +KH ++ S G++IQ +LAY + GE GGLS+ FLGDTM+TG
Sbjct: 2 TFRSKHVDDASHCLGYNIQNAWKKLAYCIWGETTTKDTEHKTV-GGLSVMFLGDTMLTGV 60
Query: 616 KFEDKLSVGDRLTLLANTGAVSIRGDTAYGVNMEATLREKDYLMGQDLAILGASLVRWHK 675
K ED +SVG+ L LL + G + +G+TAYGVNME+ L+ K Y + + + G SL++ H
Sbjct: 61 KIEDYISVGESLALLVSIGTMQAKGNTAYGVNMESRLKIKYYPINRLMLFFGLSLIKLHS 120
Query: 676 EWSMAAKLDSQFSMGRASNVAVHVDLTNKLTGRVSIKANTSEQLKIALLGVCSMTMYLW 734
++ L SQ+ + R S +A+H+ L G++++K +TS+ ++IALLG+ + ++
Sbjct: 121 AIALGINLQSQYLLRRHSKMALHIGLNTLRNGQINLKMSTSKMVQIALLGLVPLATSMY 179
>Os03g0240500 Similar to Toc34-2 protein
Length = 327
Score = 124 bits (312), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 109/202 (53%), Gaps = 13/202 (6%)
Query: 123 SCNVLVLGKTGVGKSATINSIFGEDKSKTSAFLPATTAVKEISGVVGGVKFRVVDTPGLG 182
+ +LV+GK GVGKS+T+NSI GE + SAF S G ++DTPGL
Sbjct: 38 TLTILVMGKGGVGKSSTVNSIVGERVATVSAFQSEGLRPMMCSRTRAGFTLNIIDTPGLI 97
Query: 183 TTHMDEKSNRKVLNSVKKYIKRCPPDVVLYVDRIDTQRQDANNLSLLQCITSVLGSSIWS 242
N + + +K+++ DV+LYVDR+D R D + +++ +T+ G +IW
Sbjct: 98 EGGY---INEQAVEIIKRFLLGKTIDVLLYVDRLDAYRMDTLDDQVIRAVTNSFGKAIWR 154
Query: 243 KTIITLTHSAAAPPEGPSGIPLNYEMFVTQRTHAIQQSIRQATNDPR-----FENTSALV 297
+T++ LTH+ +PP+G L+Y F T+R+ ++ + IR + F ALV
Sbjct: 155 RTLVVLTHAQLSPPDG-----LDYNDFFTKRSESLLRYIRAGAGVSKRELGDFPLPIALV 209
Query: 298 ENHHLCRRNTEGEKVLPNGLIW 319
EN C+ N GEKVLP+G W
Sbjct: 210 ENSGRCKTNENGEKVLPDGTPW 231
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.316 0.132 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 24,130,643
Number of extensions: 986106
Number of successful extensions: 3331
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 3313
Number of HSP's successfully gapped: 8
Length of query: 745
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 637
Effective length of database: 11,396,689
Effective search space: 7259690893
Effective search space used: 7259690893
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 160 (66.2 bits)