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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os01g0356800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : AIG1 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.85 (0.0136) R2 : 0.000143
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.00732 (0.0286) R2dN8 : 0.000185 R2N8 : 0.000143
σ : 0.256
deviance : 30.08
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.91 0.248 2.85 0.0531 0.0563 0.391 0.13 1.14 0.00553 10.1 1010 27 -- --
29.01 0.251 2.85 0.0945 0.0506 0.325 0.113 -- 0.0146 10.1 1010 46 -- --
27.98 0.246 2.85 0.0569 0.0559 0.386 -- 1.11 0.00742 10 1010 26 -- --
29.04 0.251 2.85 0.0987 0.0495 0.31 -- -- 0.0141 9.84 1010 171 -- --
28.16 0.247 2.85 0.057 -- 0.379 -- 1.09 0.00614 -- 1010 26 -- --
29.7 0.255 2.85 0.082 0.0508 -- 0.0981 -- 0.00193 9.84 -- -- -- --
29.74 0.255 2.85 0.0858 0.0503 -- -- -- 0.00213 9.86 -- -- -- --
29.18 0.252 2.85 0.0993 -- 0.301 -- -- 0.0153 -- 1010 258 -- --
29.3 0.252 2.85 -- 0.0495 0.296 -- -- 0.00342 9.63 1010 171 -- --
29.89 0.255 2.85 0.0853 -- -- -- -- 0.00214 -- -- -- -- --
29.93 0.256 2.85 -- 0.0501 -- -- -- -0.00743 9.73 -- -- -- --
29.44 0.253 2.85 -- -- 0.29 -- -- 0.00313 -- 1010 247 -- --
30.08 0.256 2.85 -- -- -- -- -- -0.00732 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.09 wind 9.0 1440 < th dose independent rect. 23 1
2 25.09 temperature 10.0 1440 > th dose independent rect. 23 1
5 25.09 temperature 30.0 1440 < th dose independent rect. 23 1
9 25.09 humidity 50.0 1440 > th dose independent rect. 23 1
19 25.09 atmosphere 995.0 1440 > th dose independent rect. 23 1
20 25.09 radiation 1.0 1440 < th dose independent rect. 23 1
40 25.09 temperature 10.0 1440 > th dose independent rect. 24 23
43 25.09 radiation 1.0 1440 < th dose dependent rect. 23 1
50 25.12 humidity 90.0 30 < th dose independent rect. 22 1
51 25.13 temperature 25.0 30 > th dose independent rect. 22 1
52 25.13 temperature 20.0 30 > th dose dependent rect. 22 1
53 25.14 atmosphere 1005.0 30 > th dose dependent rect. 22 1
59 25.17 atmosphere 1005.0 30 > th dose independent rect. 22 1
64 25.19 wind 1.0 30 > th dose independent rect. 22 1
65 25.19 precipitation 0.1 30 < th dose independent rect. 22 1
66 25.19 precipitation 0.1 30 < th dose dependent rect. 22 1
67 25.20 wind 3.0 30 < th dose independent rect. 22 1
71 25.20 temperature 10.0 30 > th dose independent rect. 22 1
73 25.20 temperature 30.0 30 < th dose independent rect. 22 1
74 25.20 humidity 50.0 30 > th dose independent rect. 22 1
78 25.20 atmosphere 995.0 30 > th dose independent rect. 22 1
80 25.20 atmosphere 1010.0 30 < th dose independent rect. 22 1
82 25.20 radiation 1.0 30 < th dose independent rect. 22 1
87 25.20 temperature 10.0 30 > th dose independent rect. 23 23
88 25.20 humidity 90.0 30 < th dose dependent rect. 22 1
89 25.20 radiation 1.0 30 < th dose dependent rect. 22 1
94 25.21 wind 7.0 30 < th dose dependent rect. 22 1
97 25.23 humidity 50.0 30 > th dose dependent rect. 22 1
99 25.25 wind 1.0 30 > th dose dependent rect. 22 1
100 25.26 atmosphere 1015.0 30 < th dose independent rect. 23 23
104 25.32 atmosphere 1015.0 30 < th dose dependent rect. 22 1
107 25.39 wind 9.0 30 < th dose independent rect. 23 23
110 25.41 temperature 30.0 30 < th dose dependent rect. 22 1
169 26.32 temperature 30.0 90 > th dose dependent rect. 10 1
176 26.88 humidity 50.0 1440 > th dose independent rect. 24 10
179 27.13 precipitation 0.1 30 < th dose independent rect. 23 23
180 27.13 precipitation 0.1 30 < th dose dependent rect. 23 23
185 27.21 atmosphere 995.0 30 > th dose independent rect. 23 23
189 27.25 humidity 50.0 1440 > th dose independent rect. 7 3
191 27.27 humidity 70.0 1440 < th dose dependent rect. 8 1
204 27.29 humidity 70.0 1440 < th dose independent rect. 7 1
219 27.31 humidity 50.0 1440 > th dose independent rect. 10 1
225 27.33 humidity 50.0 1440 > th dose independent rect. 18 16
231 27.35 humidity 50.0 1440 < th dose independent rect. 9 1
268 27.35 humidity 50.0 1440 < th dose dependent rect. 9 1
312 27.36 precipitation 0.1 1440 < th dose independent rect. 23 1
318 27.36 humidity 50.0 1440 > th dose independent rect. 20 15
321 27.36 precipitation 0.1 1440 < th dose dependent rect. 23 1
382 27.41 temperature 30.0 90 > th dose independent rect. 10 1
401 27.42 humidity 50.0 30 > th dose independent rect. 23 23
518 27.62 atmosphere 1010.0 90 > th dose dependent rect. 11 12
554 27.66 wind 1.0 1440 < th dose dependent rect. 1 2
561 27.70 atmosphere 1010.0 10 > th dose dependent sin 19 NA
565 27.72 atmosphere 1015.0 720 < th dose independent rect. 12 23
586 27.76 atmosphere 1010.0 10 > th dose dependent rect. 11 13
671 27.81 atmosphere 1010.0 270 > th dose dependent rect. 11 9
732 27.85 atmosphere 1010.0 90 > th dose dependent rect. 23 14
758 27.86 atmosphere 1015.0 720 < th dose independent rect. 21 14
809 27.88 temperature 30.0 10 > th dose dependent rect. 12 1
838 27.92 wind 1.0 720 < th dose independent rect. 2 1
840 27.92 atmosphere 1010.0 10 > th dose dependent no NA NA
842 27.92 atmosphere 1010.0 10 > th dose dependent rect. 23 14