BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0356800 Os01g0356800|Os01g0356800
(5436 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G02510.1 | chr4:1104766-1109360 FORWARD LENGTH=1504 438 e-122
AT2G16640.1 | chr2:7211489-7215109 REVERSE LENGTH=1207 315 6e-85
AT3G16620.1 | chr3:5658469-5661738 REVERSE LENGTH=1090 314 1e-84
AT5G20300.1 | chr5:6853544-6856332 REVERSE LENGTH=794 209 2e-53
AT1G02280.1 | chr1:448665-450246 REVERSE LENGTH=298 109 4e-23
AT5G05000.2 | chr5:1474262-1475772 REVERSE LENGTH=314 104 1e-21
AT4G15810.1 | chr4:8989162-8992591 REVERSE LENGTH=919 78 1e-13
>AT4G02510.1 | chr4:1104766-1109360 FORWARD LENGTH=1504
Length = 1503
Score = 438 bits (1127), Expect = e-122, Method: Compositional matrix adjust.
Identities = 267/723 (36%), Positives = 374/723 (51%), Gaps = 153/723 (21%)
Query: 4854 TDMTVTKKDKKLHQKLELITEKFLNLLSRMGANTMD---------------------FNL 4892
T++ +++++K+ +KL+ + KFL LL R+G + D F+L
Sbjct: 775 TEINLSEEEKQKLEKLQSLRVKFLRLLQRLGHSAEDSIAAQVLYRLALLAGRQAGQLFSL 834
Query: 4893 DHHHHKSSQQYHDNQKDLSFSCNILVLGKIGVGKSTVINSIMGEEKNKINAFDGATTNVR 4952
D K+ + + ++L FS NILVLGK GVGKS INSI+G + I+AF +TT+VR
Sbjct: 835 DAAKKKAVESEAEGNEELIFSLNILVLGKAGVGKSATINSILGNQIASIDAFGLSTTSVR 894
Query: 4953 LVSSVVDGIKVNIIDTPGLRTNVMDQGWNKKILSTVNSYTKKCPPDIILYVDRLDSWSNH 5012
+S V+G+K+ IDTPGL++ MDQ N K+LS+V KKCPPDI+LYVDRLD+ +
Sbjct: 895 EISGTVNGVKITFIDTPGLKSAAMDQSTNAKMLSSVKKVMKKCPPDIVLYVDRLDTQTRD 954
Query: 5013 FDDIPLLKTITTILGTSIWVNTVVTFTHANSIPPDNSNGDPMTYETFIAQRSHIVQQSIQ 5072
+++PLL+TIT LGTSIW N +VT THA S PPD +G P++Y+ F+AQ SHIVQQSI
Sbjct: 955 LNNLPLLRTITASLGTSIWKNAIVTLTHAASAPPDGPSGTPLSYDVFVAQCSHIVQQSIG 1014
Query: 5073 QATGDM-----CLINAFSFVENYLYCKRNCQGKKVLPTIQNWRKYLLILCYSTK------ 5121
QA GD+ L+N S VEN+ C++N +G KVLP Q WR LL+LCYS K
Sbjct: 1015 QAVGDLRLMNPSLMNPVSLVENHPLCRKNREGVKVLPNGQTWRSQLLLLCYSLKVLSETN 1074
Query: 5122 ---------------------------------PKYQPKASIHHKGLKEDSSIEVDDYSE 5148
+ PK G DS IE+DD S+
Sbjct: 1075 SLLRPQEPLDHRKVFGFRVRSPPLPYLLSWLLQSRAHPKLPGDQGGDSVDSDIEIDDVSD 1134
Query: 5149 V-----CDDEYEYGQLPTLWPLMKAQFDELMKDKNK---DECAYHVKLIQGMQF------ 5194
DDEY+ QLP PL K Q +L ++ K +E Y VKL+Q Q+
Sbjct: 1135 SEQEDGEDDEYD--QLPPFKPLRKTQLAKLSNEQRKAYFEEYDYRVKLLQKKQWREELKR 1192
Query: 5195 ------NGVTQG----SMPC--DNDLNPLQKNRMSPILNMVIEPSFDFDDPPTHQYNLLE 5242
NG G P D+ N P+ +MV+ PSFD D+ ++Y LE
Sbjct: 1193 MKEMKKNGKKLGESEFGYPGEEDDPENGAPAAVPVPLPDMVLPPSFDSDN-SAYRYRYLE 1251
Query: 5243 PTSIITRKHVLGAHTWDHEYNFDGASLEKTLVLHKPTKCFEATL-VEFSKDMKKSRIHFN 5301
PTS + + VL H WDH+ +DG + E +L L F AT V+ +KD K+ IH +
Sbjct: 1252 PTSQLLTRPVLDTHGWDHDCGYDGVNAEHSLAL---ASRFPATATVQVTKDKKEFNIHLD 1308
Query: 5302 SSFRSKHVDDASHCLGYNIQNAWKKLAYCIWGETTTKD-TKHKTVGGLSVMFLGDTMLTG 5360
SS +KH ++ S G++IQN K+LAY + GET K+ K+KT G SV FLG+ + TG
Sbjct: 1309 SSVSAKHGENGSTMAGFDIQNVGKQLAYVVRGETKFKNLRKNKTTVGGSVTFLGENIATG 1368
Query: 5361 VKIEDYISVGESLALL-----------SQY-------------------------LLRRH 5384
VK+ED I++G+ L L+ S Y L++
Sbjct: 1369 VKLEDQIALGKRLVLVGSTGTMRSQGDSAYGANLEVRLREADFPIGQDQSSFGLSLVKWR 1428
Query: 5385 SKMA------------------LHIGLNTLRNGQINLKMSTSKMVQIALLGLVPLATSMY 5426
+A L GLN +GQI ++ S+S +QIAL ++P+A S+Y
Sbjct: 1429 GDLALGANLQSQVSVGRNSKIALRAGLNNKMSGQITVRTSSSDQLQIALTAILPIAMSIY 1488
Query: 5427 KSF 5429
KS
Sbjct: 1489 KSI 1491
>AT2G16640.1 | chr2:7211489-7215109 REVERSE LENGTH=1207
Length = 1206
Score = 315 bits (806), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 219/736 (29%), Positives = 334/736 (45%), Gaps = 172/736 (23%)
Query: 4855 DMTVTKKDK--KLHQKLELITEKFLNLLSRMGANTMD----------------------- 4889
D T T+ D+ + +KL+LI KFL L R+G +
Sbjct: 488 DSTTTEADEHDETREKLQLIRVKFLRLAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGSR 547
Query: 4890 ---FNLDHHHHKSSQQYHDNQKDLSFSCNILVLGKIGVGKSTVINSIMGEEKNKINAFDG 4946
F+ D + Q Q L FSC I+VLGK GVGKS INSI E K +AF
Sbjct: 548 VGAFSFDRASAMAEQLEAAGQDPLDFSCTIMVLGKSGVGKSATINSIFDEVKFCTDAFQM 607
Query: 4947 ATTNVRLVSSVVDGIKVNIIDTPGLRTNVMDQGWNKKILSTVNSYTKKCPPDIILYVDRL 5006
T V+ V +V GIKV +IDTPGL + DQ N+KIL++V ++ KK PPDI+LY+DRL
Sbjct: 608 GTKRVQDVEGLVQGIKVRVIDTPGLLPSWSDQAKNEKILNSVKAFIKKNPPDIVLYLDRL 667
Query: 5007 DSWSNHFDDIPLLKTITTILGTSIWVNTVVTFTHANSIPPDNSNGDPMTYETFIAQRSHI 5066
D S D+PLL+TI+ + G SIW N +V THA S+PPD NG +Y+ F+ QRSH+
Sbjct: 668 DMQSRDSGDMPLLRTISDVFGPSIWFNAIVGLTHAASVPPDGPNGTASSYDMFVTQRSHV 727
Query: 5067 VQQSIQQATGDMCLINAFSFVENYLYCKRNCQGKKVLPTIQNWRKYLLILCYSTK----- 5121
+QQ+I+QA GDM L+N S VEN+ C+ N G++VLP Q W+ +LL+L +++K
Sbjct: 728 IQQAIRQAAGDMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEA 787
Query: 5122 ---------------------------------PKYQPKASIHHKGLKEDSSIEVDDYSE 5148
+ QPK G +ED +
Sbjct: 788 NALLKLQDNIPGRPFAARSKAPPLPFLLSSLLQSRPQPKLPEQQYGDEEDEDDLEESSDS 847
Query: 5149 VCDDEYEYGQLPTLWPLMKAQFDELMKDKNK---DECAYHVKLIQGMQF----------- 5194
+ EY+ QLP L KAQ L K + K DE Y KL+ Q
Sbjct: 848 DEESEYD--QLPPFKSLTKAQMATLSKSQKKQYLDEMEYREKLLMKKQMKEERKRRKMFK 905
Query: 5195 ----------NGVTQ---------GSMPCDNDLNPLQKNRMSPILNMVIEPSFDFDDPPT 5235
+G ++ S+P P+ ++ + SFD D+ PT
Sbjct: 906 KFAAEIKDLPDGYSENVEEESGGPASVPV-------------PMPDLSLPASFDSDN-PT 951
Query: 5236 HQYNLLEPTSIITRKHVLGAHTWDHEYNFDGASLEKTLVLHKPTKCFEATLVEFSKDMKK 5295
H+Y L+ ++ + VL H WDH+ ++G + E+ V+ + K + + +KD K
Sbjct: 952 HRYRYLDSSNQWLVRPVLETHGWDHDIGYEGVNAERLFVVKE--KIPISVSGQVTKDKKD 1009
Query: 5296 SRIHFNSSFRSKHVDDASHCLGYNIQNAWKKLAYCIWGETTTKD-TKHKTVGGLSVMFLG 5354
+ + + KH + S LG+++Q K+LAY + ET + ++K GLSV LG
Sbjct: 1010 ANVQLEMASSVKHGEGKSTSLGFDMQTVGKELAYTLRSETRFNNFRRNKAAAGLSVTHLG 1069
Query: 5355 DTMLTGVKIED-YIS-----------------------------------VGESLALL-- 5376
D++ G+K+ED +I+ +G L L
Sbjct: 1070 DSVSAGLKVEDKFIASKWFRIVMSGGAMTSRGDFAYGGTLEAQLRDKDYPLGRFLTTLGL 1129
Query: 5377 ----------------SQYLLRRHSKMALHIGLNTLRNGQINLKMSTSKMVQIALLGLVP 5420
SQ + R S + LN GQ+++++++S+ +Q+A++ +VP
Sbjct: 1130 SVMDWHGDLAIGGNIQSQVPIGRSSNLIARANLNNRGAGQVSVRVNSSEQLQLAMVAIVP 1189
Query: 5421 LATSMYKSFVHSAEHN 5436
L + + ++
Sbjct: 1190 LFKKLLSYYYPQTQYG 1205
>AT3G16620.1 | chr3:5658469-5661738 REVERSE LENGTH=1090
Length = 1089
Score = 314 bits (804), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 214/668 (32%), Positives = 314/668 (47%), Gaps = 142/668 (21%)
Query: 4879 LLSRMGANTMDFNLDHHHHKSSQQYHDNQKDLSFSCNILVLGKIGVGKSTVINSIMGEEK 4938
L R G+ F+ D + Q Q L FSC I+VLGK GVGKS INSI E K
Sbjct: 422 LRGRNGSRVGAFSFDRASAMAEQLEAAAQDPLDFSCTIMVLGKSGVGKSATINSIFDELK 481
Query: 4939 NKINAFDGATTNVRLVSSVVDGIKVNIIDTPGLRTNVMDQGWNKKILSTVNSYTKKCPPD 4998
+AF T V+ + V GIKV +IDTPGL + DQ N+KIL +V ++ KK PPD
Sbjct: 482 ISTDAFQVGTKKVQDIEGFVQGIKVRVIDTPGLLPSWSDQHKNEKILKSVRAFIKKSPPD 541
Query: 4999 IILYVDRLDSWSNHFDDIPLLKTITTILGTSIWVNTVVTFTHANSIPPDNSNGDPMTYET 5058
I+LY+DRLD S D+PLL+TIT + G SIW N +V THA S PPD NG +Y+
Sbjct: 542 IVLYLDRLDMQSRDSGDMPLLRTITDVFGPSIWFNAIVGLTHAASAPPDGPNGTASSYDM 601
Query: 5059 FIAQRSHIVQQSIQQATGDMCLINAFSFVENYLYCKRNCQGKKVLPTIQNWRKYLLILCY 5118
F+ QRSH++QQ+I+QA GDM L+N S VEN+ C+ N G++VLP Q W+ +LL+L +
Sbjct: 602 FVTQRSHVIQQAIRQAAGDMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSF 661
Query: 5119 STK---------------PKYQ---------------------PKASIHHKGLKEDSSIE 5142
++K P Q P+A + + ++ +
Sbjct: 662 ASKILAEANALLKLQDNIPGGQFATRSKAPPLPLLLSSLLQSRPQAKLPEQQYDDEDDED 721
Query: 5143 VDDYSEVCDDEYEYGQLPTLWPLMKAQFDELMKDKNK---DECAYHVKLIQGMQF----- 5194
D S ++E EY +LP L KA+ +L K + K DE Y KL Q
Sbjct: 722 DLDESSDSEEESEYDELPPFKRLTKAEMTKLSKSQKKEYLDEMEYREKLFMKRQMKEERK 781
Query: 5195 ----------------NGVTQ---------GSMPCDNDLNPLQKNRMSPILNMVIEPSFD 5229
NG ++ S+P P+ ++ + SFD
Sbjct: 782 RRKLLKKFAAEIKDMPNGYSENVEEERSEPASVPV-------------PMPDLSLPASFD 828
Query: 5230 FDDPPTHQYNLLEPTSIITRKHVLGAHTWDHEYNFDGASLEKTLVLH-KPTKCFEATLVE 5288
D+ PTH+Y L+ ++ + VL H WDH+ ++G + E+ V+ K F +
Sbjct: 829 SDN-PTHRYRYLDTSNQWLVRPVLETHGWDHDIGYEGVNAERLFVVKDKIPVSFSG---Q 884
Query: 5289 FSKDMKKSRIHFNSSFRSKHVDDASHCLGYNIQNAWKKLAYCIWGETT-TKDTKHKTVGG 5347
+KD K + + + KH + S LG+++QNA K+LAY I ET K K+K G
Sbjct: 885 VTKDKKDAHVQLELASSVKHGEGRSTSLGFDMQNAGKELAYTIRSETRFNKFRKNKAAAG 944
Query: 5348 LSVMFLGDTMLTGVKIEDYI------------------------------------SVGE 5371
LSV LGD++ G+K+ED + +G
Sbjct: 945 LSVTLLGDSVSAGLKVEDKLIANKRFRMVMSGGAMTSRGDVAYGGTLEAQFRDKDYPLGR 1004
Query: 5372 SLALL------------------SQYLLRRHSKMALHIGLNTLRNGQINLKMSTSKMVQI 5413
L+ L SQ + R S + LN GQ+++++++S+ +Q+
Sbjct: 1005 FLSTLGLSVMDWHGDLAIGGNIQSQVPIGRSSNLIARANLNNRGAGQVSIRVNSSEQLQL 1064
Query: 5414 ALLGLVPL 5421
A++ LVPL
Sbjct: 1065 AVVALVPL 1072
>AT5G20300.1 | chr5:6853544-6856332 REVERSE LENGTH=794
Length = 793
Score = 209 bits (533), Expect = 2e-53, Method: Composition-based stats.
Identities = 165/560 (29%), Positives = 263/560 (46%), Gaps = 57/560 (10%)
Query: 4899 SSQQYHDNQKDLSFSCNILVLGKIGVGKSTVINSIMGEEKNKINAFDGATTNVRLVSSVV 4958
+ +Q +L FS ILVLGK GVGKS INSI G+ K++ +AF T + V V
Sbjct: 152 AREQESSGIPELDFSLRILVLGKTGVGKSATINSIFGQPKSETDAFRPGTDRIEEVMGTV 211
Query: 4959 DGIKVNIIDTPGLRT-NVMDQGWNKKILSTVNSYTKKCPPDIILYVDRLDSWSNHFDDIP 5017
G+KV IDTPG + N+KIL ++ Y KK PPD++LY+DRLD + D
Sbjct: 212 SGVKVTFIDTPGFHPLSSSSTRKNRKILLSIKRYVKKRPPDVVLYLDRLDMIDMRYSDFS 271
Query: 5018 LLKTITTILGTSIWVNTVVTFTHANSIPPDNSNGDPMTYETFIAQRSHIVQQSIQQATGD 5077
LL+ IT I G +IW+NT++ TH+ + + NG + YE+++ QR +VQ I QA D
Sbjct: 272 LLQLITEIFGAAIWLNTILVMTHSAATT-EGRNGQSVNYESYVGQRMDVVQHYIHQAVSD 330
Query: 5078 MCLINAFSFVENYLYCKRNCQGKKVLPTIQNWRKYLLILCYSTK---------------- 5121
L N VEN+ CK+N G+ VLP W+ + LC TK
Sbjct: 331 TKLENPVLLVENHPSCKKNLAGEYVLPNGVVWKPQFMFLCVCTKVLGDVQSLLRFRDSIG 390
Query: 5122 ---PKYQPKASIHH----------KGLKEDSSIEVDDYSEV-CDDEYEYGQLPTLWPLMK 5167
P AS+ H +++ E+D + ++E EY QLPT+ L K
Sbjct: 391 LGQPSSTRTASLPHLLSVFLRRRLSSGADETEKEIDKLLNLDLEEEDEYDQLPTIRILGK 450
Query: 5168 AQFDELMKDKNK---DECAYHVKLIQGMQFNGVTQGS-----MPCDNDLNPLQKNRMS-P 5218
++F++L K + K DE Y L Q + + +N + Q+++ + P
Sbjct: 451 SRFEKLSKSQKKEYLDELDYRETLYLKKQLKEECRRRRDEKLVEEENLEDTEQRDQAAVP 510
Query: 5219 ILNMVIEPSFDFDDPPTHQYNLLEPTSIITRKHVLGAHTWDHEYNFDGASLEKTLVLHKP 5278
+ +M SFD D P H+Y + + V WD + FDG ++E +++
Sbjct: 511 LPDMAGPDSFD-SDFPAHRYRCVSAGDQWLVRPVYDPQGWDRDVGFDGINIETAAKINR- 568
Query: 5279 TKCFEATLVEFSKDMKKSRIH--FNSSFRSKHVDDASHCLGYNIQNAWKKLAYCIWGETT 5336
F + + S+D ++ I N+++ +++ + + + ++Q++ + L Y G T
Sbjct: 569 -NLFASATGQVSRDKQRFTIQSETNAAY-TRNFREQTFSVAVDLQSSGEDLVYSFQGGTK 626
Query: 5337 TKDTKHKTVG-GLSVMFLGDTMLTGVKIEDYISVGESLALLSQYLLRRHSKMALHIGL-- 5393
+ KH T G+ + G G K+ED + VG+ + L + R S + G
Sbjct: 627 LQTFKHNTTDVGVGLTSFGGKYYVGGKLEDTLLVGKRVKLTANAGQMRGSGQTANGGSFE 686
Query: 5394 -------NTLRNGQINLKMS 5406
+RN QI L M+
Sbjct: 687 ACIRGRDYPVRNEQIGLTMT 706
>AT1G02280.1 | chr1:448665-450246 REVERSE LENGTH=298
Length = 297
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 113/211 (53%), Gaps = 20/211 (9%)
Query: 4907 QKDLSFSCNILVLGKIGVGKSTVINSIMGEEKNKINAFDGATTNVRLVSSVVDGIKVNII 4966
QKD++ S +LVLGK GVGKS+ +NS++GE+ +++ F +VS + G +NII
Sbjct: 31 QKDMN-SMTVLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTMGGFTINII 89
Query: 4967 DTPGLRTNVMDQGW-NKKILSTVNSYTKKCPPDIILYVDRLDSWSNHFDDIPLLKTITTI 5025
DTPGL ++ G+ N + L + + D++LYVDRLD + D ++ IT
Sbjct: 90 DTPGL----VEAGYVNHQALELIKGFLVNRTIDVLLYVDRLDVYRVDELDKQVVIAITQT 145
Query: 5026 LGTSIWVNTVVTFTHANSIPPDNSNGDPMTYETFIAQRSHIVQQSIQQATG-------DM 5078
G IW T++ THA PPD ++YETF ++RS + ++I+ + D
Sbjct: 146 FGKEIWCKTLLVLTHAQFSPPDE-----LSYETFSSKRSDSLLKTIRAGSKMRKQEFEDS 200
Query: 5079 CLINAFSFVENYLYCKRNCQGKKVLPTIQNW 5109
+ A + EN C +N + +K LP + W
Sbjct: 201 AI--AVVYAENSGRCSKNDKDEKALPNGEAW 229
>AT5G05000.2 | chr5:1474262-1475772 REVERSE LENGTH=314
Length = 313
Score = 104 bits (260), Expect = 1e-21, Method: Composition-based stats.
Identities = 70/212 (33%), Positives = 109/212 (51%), Gaps = 22/212 (10%)
Query: 4907 QKDLSFSCNILVLGKIGVGKSTVINSIMGEEKNKINAFDGATTNVRLVSSVVDGIKVNII 4966
++D+S S +LV+GK GVGKS+ +NS++GE+ ++ F LVS G +NII
Sbjct: 33 EEDVS-SLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRTRSGFTLNII 91
Query: 4967 DTPGLRTNVMDQGW-NKKILSTVNSYTKKCPPDIILYVDRLDSWSNHFDDIPLLKTITTI 5025
DTPGL ++ G+ N + ++ + + D++LYVDRLD + D ++ IT
Sbjct: 92 DTPGL----IEGGYVNDQAINIIKRFLLNMTIDVLLYVDRLDVYRVDDLDRQVVGAITDA 147
Query: 5026 LGTSIWVNTVVTFTHANSIPPDNSNGDPMTYETFIAQRSH----IVQQSIQQATGDMCLI 5081
G IW + + THA PPD N Y F+++RS+ ++Q Q D+
Sbjct: 148 FGKEIWKKSALVLTHAQFSPPDGLN-----YNHFVSKRSNALLKVIQTGAQLKKQDL--- 199
Query: 5082 NAFS----FVENYLYCKRNCQGKKVLPTIQNW 5109
FS VEN C +N +K+LP +W
Sbjct: 200 QGFSIPVILVENSGRCHKNESDEKILPCGTSW 231
>AT4G15810.1 | chr4:8989162-8992591 REVERSE LENGTH=919
Length = 918
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 53/77 (68%)
Query: 4909 DLSFSCNILVLGKIGVGKSTVINSIMGEEKNKINAFDGATTNVRLVSSVVDGIKVNIIDT 4968
DL FS N+LV+GK GVGKS +NSI GE K+ + AF T + V V GI+++I+DT
Sbjct: 625 DLDFSINVLVIGKTGVGKSATVNSIFGETKSAVGAFGVTTNSANYVVGNVGGIQISILDT 684
Query: 4969 PGLRTNVMDQGWNKKIL 4985
PGL ++ ++ +N+++L
Sbjct: 685 PGLLSSATEEQFNQEVL 701
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.307 0.127 0.344
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 114,735,004
Number of extensions: 5218516
Number of successful extensions: 19422
Number of sequences better than 1.0e-05: 12
Number of HSP's gapped: 19276
Number of HSP's successfully gapped: 43
Length of query: 5436
Length of database: 11,106,569
Length adjustment: 121
Effective length of query: 5315
Effective length of database: 7,789,233
Effective search space: 41399773395
Effective search space used: 41399773395
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 123 (52.0 bits)