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Os10g0548800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Chloroplast outer envelope protein-like (Chloroplast outer envelope membrane-associated protein Toc120).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.98 (0.0151) R2 : 0.655
β1 : 1.49 (0.0552) R2dD : 0.575 R2D : 0.379
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.531 (0.0322) R2dN8 : 0.276 R2N8 : 0.0805
σ : 0.283
deviance : 36.63
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = wind, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.93 0.248 10 1.53 0.259 -0.0569 0.521 1.25 0.517 1 3.3 770 -- --
28.31 0.248 10 1.4 0.231 -0.341 0.867 -- 0.477 0.454 6.1 3515 -- --
28.81 0.25 10 1.52 0.268 -0.0581 -- 1.58 0.511 1.43 3.323 786 -- --
31.17 0.26 9.99 1.36 0.241 -0.344 -- -- 0.484 1.93 6.2 3570 -- --
32.32 0.265 10 1.58 -- 0.119 -- 1.55 0.51 -- 3.5 786 -- --
30.2 0.258 9.98 1.52 0.212 -- 0.926 -- 0.533 0.415 -- -- -- --
33.21 0.27 9.98 1.48 0.24 -- -- -- 0.526 2.31 -- -- -- --
34.8 0.275 9.99 1.39 -- -0.343 -- -- 0.485 -- 6.359 3295 -- --
42.65 0.304 10.1 -- 0.299 -1.27 -- -- 0.226 1.84 7.41 37234 -- --
36.63 0.283 9.98 1.49 -- -- -- -- 0.531 -- -- -- -- --
91.23 0.447 10 -- 0.269 -- -- -- 0.36 2.41 -- -- -- --
45.35 0.314 10.1 -- -- -1.24 -- -- 0.223 -- 7.499 37497 -- --
95.5 0.456 10 -- -- -- -- -- 0.366 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 26.29 radiation 10.0 270 > th dose independent rect. 9 6
4 26.45 atmosphere 995.0 270 > th dose independent rect. 15 18
5 26.48 wind 1.0 270 > th dose independent rect. 15 17
7 26.54 atmosphere 1015.0 10 < th dose dependent rect. 10 18
8 26.55 temperature 30.0 270 < th dose dependent rect. 3 6
9 26.56 humidity 90.0 270 < th dose independent rect. 9 6
10 26.57 temperature 15.0 90 > th dose independent rect. 11 16
11 26.58 atmosphere 1015.0 90 < th dose dependent rect. 11 16
13 26.60 atmosphere 995.0 10 > th dose dependent rect. 18 16
17 26.65 wind 7.0 30 < th dose independent rect. 18 16
19 26.65 atmosphere 995.0 10 > th dose dependent rect. 16 18
20 26.67 wind 7.0 10 < th dose independent rect. 10 8
22 26.68 temperature 15.0 270 > th dose independent rect. 9 6
24 26.68 atmosphere 995.0 270 > th dose dependent rect. 15 17
28 26.70 humidity 70.0 10 < th dose independent rect. 10 9
32 26.71 humidity 90.0 30 < th dose independent rect. 10 8
34 26.72 wind 1.0 30 > th dose independent rect. 18 16
38 26.73 temperature 10.0 10 > th dose dependent rect. 10 8
42 26.74 temperature 10.0 270 > th dose dependent rect. 8 7
44 26.75 temperature 30.0 10 < th dose independent rect. 16 18
45 26.75 precipitation 0.1 270 < th dose independent rect. 15 18
48 26.75 precipitation 0.1 270 < th dose dependent rect. 15 18
49 26.76 wind 5.0 270 < th dose independent rect. 3 6
54 26.77 precipitation 0.1 90 < th dose independent rect. 3 8
58 26.77 precipitation 0.1 90 < th dose dependent rect. 3 8
59 26.78 temperature 25.0 270 < th dose independent rect. 3 5
60 26.78 wind 9.0 90 < th dose independent rect. 11 16
73 26.82 wind 9.0 270 < th dose independent rect. 9 6
75 26.83 humidity 50.0 270 > th dose independent rect. 9 6
76 26.83 temperature 10.0 1440 > th dose independent rect. 11 8
80 26.83 temperature 10.0 1440 > th dose independent rect. 19 16
83 26.83 atmosphere 995.0 1440 > th dose independent rect. 19 16
90 26.85 temperature 10.0 90 > th dose independent rect. 3 8
91 26.85 atmosphere 995.0 90 > th dose independent rect. 3 8
92 26.85 atmosphere 1015.0 90 < th dose independent rect. 3 8
95 26.85 wind 9.0 270 < th dose independent rect. 15 18
98 26.86 humidity 50.0 90 > th dose independent rect. 3 8
104 26.88 wind 5.0 30 < th dose independent rect. 16 18
111 26.89 precipitation 0.1 30 < th dose independent rect. 18 16
113 26.89 precipitation 0.1 30 < th dose dependent rect. 18 16
115 26.90 precipitation 0.1 270 < th dose independent rect. 9 6
122 26.90 precipitation 0.1 270 < th dose dependent rect. 9 6
127 26.91 atmosphere 1015.0 270 < th dose independent rect. 9 6
131 26.91 temperature 10.0 270 > th dose independent rect. 15 18
137 26.92 precipitation 0.1 270 < th dose independent rect. 3 6
139 26.92 temperature 15.0 90 > th dose independent rect. 10 8
141 26.92 precipitation 0.1 270 < th dose dependent rect. 3 6
152 26.94 temperature 30.0 10 < th dose independent rect. 18 16
153 26.94 humidity 50.0 270 > th dose independent rect. 10 17
169 26.95 temperature 15.0 10 > th dose independent rect. 10 18
197 26.98 wind 3.0 720 > th dose independent rect. 12 1
199 26.98 wind 5.0 10 < th dose independent rect. 4 6
200 26.98 temperature 10.0 270 > th dose independent rect. 3 6
202 26.98 humidity 50.0 270 > th dose independent rect. 3 6
203 26.98 atmosphere 995.0 270 > th dose independent rect. 3 6
204 26.98 atmosphere 1015.0 270 < th dose independent rect. 3 6
209 26.98 wind 9.0 270 < th dose independent rect. 9 18
213 26.98 atmosphere 1010.0 10 < th dose independent rect. 10 18
214 26.98 atmosphere 1015.0 270 < th dose independent rect. 15 18
218 26.99 wind 3.0 720 > th dose independent rect. 9 6
228 26.99 atmosphere 1015.0 30 < th dose independent rect. 18 16
236 27.00 atmosphere 995.0 10 > th dose independent rect. 18 16
238 27.00 radiation 40.0 270 < th dose independent rect. 15 17
245 27.01 atmosphere 1015.0 30 < th dose independent rect. 10 8
246 27.01 precipitation 0.1 30 < th dose independent rect. 10 8
249 27.01 temperature 10.0 30 > th dose independent rect. 18 16
250 27.01 humidity 50.0 30 > th dose independent rect. 18 16
257 27.01 precipitation 0.1 30 < th dose dependent rect. 10 8
277 27.02 wind 9.0 10 < th dose independent rect. 10 18
278 27.02 wind 9.0 270 < th dose dependent rect. 3 6
285 27.03 atmosphere 995.0 270 > th dose independent rect. 9 6
323 27.06 humidity 50.0 4320 > th dose independent rect. 19 16
325 27.06 wind 9.0 10 < th dose dependent rect. 4 6
326 27.06 temperature 30.0 10 < th dose dependent rect. 4 6
332 27.07 precipitation 0.1 10 < th dose independent rect. 4 6
342 27.07 wind 9.0 270 < th dose dependent rect. 9 6
343 27.07 precipitation 0.1 10 < th dose dependent rect. 4 6
348 27.08 temperature 10.0 10 > th dose independent rect. 4 6
350 27.08 humidity 50.0 10 > th dose independent rect. 4 6
351 27.08 atmosphere 995.0 10 > th dose independent rect. 4 6
352 27.08 atmosphere 1015.0 10 < th dose independent rect. 4 6
353 27.08 radiation 10.0 10 > th dose independent rect. 10 7
361 27.08 precipitation 0.1 90 < th dose independent rect. 11 16
363 27.08 atmosphere 1015.0 10 < th dose dependent rect. 10 8
365 27.08 precipitation 0.1 90 < th dose dependent rect. 11 16
377 27.09 humidity 50.0 30 > th dose independent rect. 10 8
382 27.09 humidity 60.0 30 > th dose independent rect. 16 18
385 27.09 atmosphere 995.0 10 > th dose dependent rect. 4 6
389 27.10 temperature 25.0 270 < th dose independent rect. 5 1
399 27.10 wind 1.0 30 > th dose independent rect. 10 8
403 27.10 atmosphere 995.0 90 > th dose dependent rect. 3 8
405 27.10 temperature 10.0 10 > th dose dependent rect. 10 18
439 27.12 precipitation 0.1 270 < th dose independent rect. 9 18
442 27.12 precipitation 0.1 270 < th dose dependent rect. 9 18
493 27.15 radiation 1.0 4320 < th dose dependent rect. 6 10
524 27.17 atmosphere 1010.0 90 < th dose independent rect. 11 16
529 27.17 atmosphere 995.0 270 > th dose dependent rect. 3 6
544 27.18 temperature 10.0 90 > th dose dependent rect. 10 17
575 27.19 atmosphere 995.0 10 > th dose independent rect. 16 18
595 27.20 precipitation 0.1 10 < th dose independent rect. 10 18
598 27.20 precipitation 0.1 10 < th dose dependent rect. 10 18
615 27.21 radiation 1.0 90 > th dose dependent rect. 10 8
632 27.22 radiation 40.0 270 < th dose independent rect. 3 6
646 27.22 humidity 90.0 270 < th dose dependent rect. 10 5
719 27.24 wind 1.0 270 > th dose independent rect. 2 7
729 27.24 radiation 1.0 10 > th dose dependent sin 16 NA
736 27.24 radiation 30.0 10 < th dose dependent rect. 3 23
747 27.25 wind 3.0 720 > th dose independent rect. 8 11
759 27.26 wind 3.0 720 > th dose independent sin 0 NA
787 27.27 humidity 90.0 10 < th dose independent rect. 2 8
813 27.27 radiation 1.0 270 > th dose dependent rect. 9 6
840 27.28 radiation 1.0 270 > th dose dependent rect. 10 4
930 27.31 wind 3.0 1440 < th dose independent rect. 11 2
983 27.32 temperature 30.0 10 < th dose independent rect. 4 6