BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0548800 Os10g0548800|AK072270
(1008 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G16640.1 | chr2:7211489-7215109 REVERSE LENGTH=1207 962 0.0
AT3G16620.1 | chr3:5658469-5661738 REVERSE LENGTH=1090 961 0.0
AT4G02510.1 | chr4:1104766-1109360 FORWARD LENGTH=1504 658 0.0
AT5G20300.1 | chr5:6853544-6856332 REVERSE LENGTH=794 515 e-146
AT5G05000.2 | chr5:1474262-1475772 REVERSE LENGTH=314 125 1e-28
AT1G02280.1 | chr1:448665-450246 REVERSE LENGTH=298 117 2e-26
AT4G15810.1 | chr4:8989162-8992591 REVERSE LENGTH=919 89 1e-17
AT4G02482.1 | chr4:1092002-1092484 FORWARD LENGTH=135 62 2e-09
>AT2G16640.1 | chr2:7211489-7215109 REVERSE LENGTH=1207
Length = 1206
Score = 962 bits (2487), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/747 (62%), Positives = 576/747 (77%), Gaps = 10/747 (1%)
Query: 265 GLGASTSLSQPSARPVQQTRANGPVAVDRETRQDVESPEDGDENDEIREKLQMIRVKFLR 324
GLG ++ L +P++R QQ+R NG + ++ + + + + DE+DE REKLQ+IRVKFLR
Sbjct: 454 GLGRASPLLEPASRAPQQSRVNGNGSHNQFQQAEDSTTTEADEHDETREKLQLIRVKFLR 513
Query: 325 LANRFGQTPNNMVVSQVLYRLGLAEQLRRNTGQ--GVFSFDRAQDMAERLEAAGNEPLDF 382
LA+R GQTP+N+VV+QVLYRLGLAEQLR G G FSFDRA MAE+LEAAG +PLDF
Sbjct: 514 LAHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGSRVGAFSFDRASAMAEQLEAAGQDPLDF 573
Query: 383 SCTILVLGKTGVGKSATINSIFDDVRLETNAFDTSTRKVQEVVGAVEGIKVKVIDTPGLS 442
SCTI+VLGK+GVGKSATINSIFD+V+ T+AF T++VQ+V G V+GIKV+VIDTPGL
Sbjct: 574 SCTIMVLGKSGVGKSATINSIFDEVKFCTDAFQMGTKRVQDVEGLVQGIKVRVIDTPGLL 633
Query: 443 CSSSDQHHNQKILNSVKRLISRNPPDIVLYFDRLDMQTRDYGDVPLLQTITRVFGASIWF 502
S SDQ N+KILNSVK I +NPPDIVLY DRLDMQ+RD GD+PLL+TI+ VFG SIWF
Sbjct: 634 PSWSDQAKNEKILNSVKAFIKKNPPDIVLYLDRLDMQSRDSGDMPLLRTISDVFGPSIWF 693
Query: 503 NAIVVLTHAASAPPDGLNGIPLSYEMFVTQRSHVVQQAIRQAAGDVRLMNPVSLVENHSA 562
NAIV LTHAAS PPDG NG SY+MFVTQRSHV+QQAIRQAAGD+RLMNPVSLVENHSA
Sbjct: 694 NAIVGLTHAASVPPDGPNGTASSYDMFVTQRSHVIQQAIRQAAGDMRLMNPVSLVENHSA 753
Query: 563 CRTNRAGQRVLPNGHVWKPQLLLLCFASKVLAEANALLKLQDNPAGKP---RMRIXXXXX 619
CRTNRAGQRVLPNG VWKP LLLL FASK+LAEANALLKLQDN G+P R +
Sbjct: 754 CRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKLQDNIPGRPFAARSKAPPLPF 813
Query: 620 XXXXXXXXRAPLKLPEEQFGXXXXXXXXXXXXXXXXXXXXXXXLPPFKRLTKAQLAKLNH 679
R KLPE+Q+G LPPFK LTKAQ+A L+
Sbjct: 814 LLSSLLQSRPQPKLPEQQYGDEEDEDDLEESSDSDEESEYDQ-LPPFKSLTKAQMATLSK 872
Query: 680 AQRKAYLEELDYREKLFYKKQLKXXXXXXXXXXXXXXXXSARTDDFSNSNLEDDGSAPTN 739
+Q+K YL+E++YREKL KKQ+K D +S N+E++ P +
Sbjct: 873 SQKKQYLDEMEYREKLLMKKQMKEERKRRKMFKKFAAEIKDLPDGYS-ENVEEESGGPAS 931
Query: 740 VAVPMPDMVLPSSFDSDHPSHRYRFLDTPSEWLVRPVLETQGWDHDVGYEGLNVERLFAV 799
V VPMPD+ LP+SFDSD+P+HRYR+LD+ ++WLVRPVLET GWDHD+GYEG+N ERLF V
Sbjct: 932 VPVPMPDLSLPASFDSDNPTHRYRYLDSSNQWLVRPVLETHGWDHDIGYEGVNAERLFVV 991
Query: 800 KGKVPLSVSGQLSKDKKDCSLQMEVASSLKHGEGKTTSLGLDLQSVGKDMAYTLRGESRF 859
K K+P+SVSGQ++KDKKD ++Q+E+ASS+KHGEGK+TSLG D+Q+VGK++AYTLR E+RF
Sbjct: 992 KEKIPISVSGQVTKDKKDANVQLEMASSVKHGEGKSTSLGFDMQTVGKELAYTLRSETRF 1051
Query: 860 KNFRRNNTAAGISATLLGDSVSAGVKVEDKLVVNKQLRVLVSGGAMSGRGDVAYGGRLEA 919
NFRRN AAG+S T LGDSVSAG+KVEDK + +K R+++SGGAM+ RGD AYGG LEA
Sbjct: 1052 NNFRRNKAAAGLSVTHLGDSVSAGLKVEDKFIASKWFRIVMSGGAMTSRGDFAYGGTLEA 1111
Query: 920 TLKDKDYPIGRMLSTIALSVVDWHGDLAVGCNIQSQIPAGRASNLIGHANLSNKGTGQVG 979
L+DKDYP+GR L+T+ LSV+DWHGDLA+G NIQSQ+P GR+SNLI ANL+N+G GQV
Sbjct: 1112 QLRDKDYPLGRFLTTLGLSVMDWHGDLAIGGNIQSQVPIGRSSNLIARANLNNRGAGQVS 1171
Query: 980 IRLNSSEHLEIALIALVPIYQNIKKLL 1006
+R+NSSE L++A++A+VP++ KKLL
Sbjct: 1172 VRVNSSEQLQLAMVAIVPLF---KKLL 1195
>AT3G16620.1 | chr3:5658469-5661738 REVERSE LENGTH=1090
Length = 1089
Score = 961 bits (2485), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/767 (61%), Positives = 587/767 (76%), Gaps = 11/767 (1%)
Query: 246 SISGAAGRSNGPSLP-SRPAGLGASTSLSQPSARPVQQTRANGPVAVDRETRQDVESPED 304
S+S RS+ +LP +RPAGLG + L +P+ R QQ R NG V+ ++ + + + +
Sbjct: 316 SVSPTESRSDTAALPPARPAGLGRAAPLLEPAPRVTQQPRVNGNVSHNQPQQAEDSTTAE 375
Query: 305 GDENDEIREKLQMIRVKFLRLANRFGQTPNNMVVSQVLYRLGLAEQLRRNTGQ--GVFSF 362
DE+DE REKLQ IRVKFLRL++R GQTP+N+VV+QVLYRLGLAEQLR G G FSF
Sbjct: 376 TDEHDETREKLQFIRVKFLRLSHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGSRVGAFSF 435
Query: 363 DRAQDMAERLEAAGNEPLDFSCTILVLGKTGVGKSATINSIFDDVRLETNAFDTSTRKVQ 422
DRA MAE+LEAA +PLDFSCTI+VLGK+GVGKSATINSIFD++++ T+AF T+KVQ
Sbjct: 436 DRASAMAEQLEAAAQDPLDFSCTIMVLGKSGVGKSATINSIFDELKISTDAFQVGTKKVQ 495
Query: 423 EVVGAVEGIKVKVIDTPGLSCSSSDQHHNQKILNSVKRLISRNPPDIVLYFDRLDMQTRD 482
++ G V+GIKV+VIDTPGL S SDQH N+KIL SV+ I ++PPDIVLY DRLDMQ+RD
Sbjct: 496 DIEGFVQGIKVRVIDTPGLLPSWSDQHKNEKILKSVRAFIKKSPPDIVLYLDRLDMQSRD 555
Query: 483 YGDVPLLQTITRVFGASIWFNAIVVLTHAASAPPDGLNGIPLSYEMFVTQRSHVVQQAIR 542
GD+PLL+TIT VFG SIWFNAIV LTHAASAPPDG NG SY+MFVTQRSHV+QQAIR
Sbjct: 556 SGDMPLLRTITDVFGPSIWFNAIVGLTHAASAPPDGPNGTASSYDMFVTQRSHVIQQAIR 615
Query: 543 QAAGDVRLMNPVSLVENHSACRTNRAGQRVLPNGHVWKPQLLLLCFASKVLAEANALLKL 602
QAAGD+RLMNPVSLVENHSACRTNRAGQRVLPNG VWKP LLLL FASK+LAEANALLKL
Sbjct: 616 QAAGDMRLMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLLLLSFASKILAEANALLKL 675
Query: 603 QDN-PAGK--PRMRIXXXXXXXXXXXXXRAPLKLPEEQFGXXXXXXXXXXXXXXXXXXXX 659
QDN P G+ R + R KLPE+Q
Sbjct: 676 QDNIPGGQFATRSKAPPLPLLLSSLLQSRPQAKLPEQQ-YDDEDDEDDLDESSDSEEESE 734
Query: 660 XXXLPPFKRLTKAQLAKLNHAQRKAYLEELDYREKLFYKKQLKXXXXXXXXXXXXXXXXS 719
LPPFKRLTKA++ KL+ +Q+K YL+E++YREKLF K+Q+K
Sbjct: 735 YDELPPFKRLTKAEMTKLSKSQKKEYLDEMEYREKLFMKRQMKEERKRRKLLKKFAAEIK 794
Query: 720 ARTDDFSNSNLEDDGSAPTNVAVPMPDMVLPSSFDSDHPSHRYRFLDTPSEWLVRPVLET 779
+ +S N+E++ S P +V VPMPD+ LP+SFDSD+P+HRYR+LDT ++WLVRPVLET
Sbjct: 795 DMPNGYS-ENVEEERSEPASVPVPMPDLSLPASFDSDNPTHRYRYLDTSNQWLVRPVLET 853
Query: 780 QGWDHDVGYEGLNVERLFAVKGKVPLSVSGQLSKDKKDCSLQMEVASSLKHGEGKTTSLG 839
GWDHD+GYEG+N ERLF VK K+P+S SGQ++KDKKD +Q+E+ASS+KHGEG++TSLG
Sbjct: 854 HGWDHDIGYEGVNAERLFVVKDKIPVSFSGQVTKDKKDAHVQLELASSVKHGEGRSTSLG 913
Query: 840 LDLQSVGKDMAYTLRGESRFKNFRRNNTAAGISATLLGDSVSAGVKVEDKLVVNKQLRVL 899
D+Q+ GK++AYT+R E+RF FR+N AAG+S TLLGDSVSAG+KVEDKL+ NK+ R++
Sbjct: 914 FDMQNAGKELAYTIRSETRFNKFRKNKAAAGLSVTLLGDSVSAGLKVEDKLIANKRFRMV 973
Query: 900 VSGGAMSGRGDVAYGGRLEATLKDKDYPIGRMLSTIALSVVDWHGDLAVGCNIQSQIPAG 959
+SGGAM+ RGDVAYGG LEA +DKDYP+GR LST+ LSV+DWHGDLA+G NIQSQ+P G
Sbjct: 974 MSGGAMTSRGDVAYGGTLEAQFRDKDYPLGRFLSTLGLSVMDWHGDLAIGGNIQSQVPIG 1033
Query: 960 RASNLIGHANLSNKGTGQVGIRLNSSEHLEIALIALVPIYQNIKKLL 1006
R+SNLI ANL+N+G GQV IR+NSSE L++A++ALVP++ KKLL
Sbjct: 1034 RSSNLIARANLNNRGAGQVSIRVNSSEQLQLAVVALVPLF---KKLL 1077
>AT4G02510.1 | chr4:1104766-1109360 FORWARD LENGTH=1504
Length = 1503
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 355/764 (46%), Positives = 473/764 (61%), Gaps = 28/764 (3%)
Query: 262 RPAGLGASTSLSQPSARPV---QQTRANGPVAVDRETRQDVESPEDGDENDEIREKLQMI 318
RPAGL +S +P+A P +N V + ET ++ +E + EKLQ +
Sbjct: 739 RPAGLSSSLRPLKPAAAPRANRSNIFSNSNVTMADETEINL-----SEEEKQKLEKLQSL 793
Query: 319 RVKFLRLANRFGQTPNNMVVSQVLYRLGLAEQLRRNTGQGVFSFDRAQDMAERLEAAGNE 378
RVKFLRL R G + + + +QVLYRL L R GQ +FS D A+ A EA GNE
Sbjct: 794 RVKFLRLLQRLGHSAEDSIAAQVLYRLALL--AGRQAGQ-LFSLDAAKKKAVESEAEGNE 850
Query: 379 PLDFSCTILVLGKTGVGKSATINSIFDDVRLETNAFDTSTRKVQEVVGAVEGIKVKVIDT 438
L FS ILVLGK GVGKSATINSI + +AF ST V+E+ G V G+K+ IDT
Sbjct: 851 ELIFSLNILVLGKAGVGKSATINSILGNQIASIDAFGLSTTSVREISGTVNGVKITFIDT 910
Query: 439 PGLSCSSSDQHHNQKILNSVKRLISRNPPDIVLYFDRLDMQTRDYGDVPLLQTITRVFGA 498
PGL ++ DQ N K+L+SVK+++ + PPDIVLY DRLD QTRD ++PLL+TIT G
Sbjct: 911 PGLKSAAMDQSTNAKMLSSVKKVMKKCPPDIVLYVDRLDTQTRDLNNLPLLRTITASLGT 970
Query: 499 SIWFNAIVVLTHAASAPPDGLNGIPLSYEMFVTQRSHVVQQAIRQAAGDVRLMNP----- 553
SIW NAIV LTHAASAPPDG +G PLSY++FV Q SH+VQQ+I QA GD+RLMNP
Sbjct: 971 SIWKNAIVTLTHAASAPPDGPSGTPLSYDVFVAQCSHIVQQSIGQAVGDLRLMNPSLMNP 1030
Query: 554 VSLVENHSACRTNRAGQRVLPNGHVWKPQLLLLCFASKVLAEANALLKLQDNPAGKP--- 610
VSLVENH CR NR G +VLPNG W+ QLLLLC++ KVL+E N+LL+ Q+ +
Sbjct: 1031 VSLVENHPLCRKNREGVKVLPNGQTWRSQLLLLCYSLKVLSETNSLLRPQEPLDHRKVFG 1090
Query: 611 -RMRIXXXXXXXXXXXXXRAPLKLPEEQFGXXXXXXXX----XXXXXXXXXXXXXXXLPP 665
R+R RA KLP +Q G LPP
Sbjct: 1091 FRVRSPPLPYLLSWLLQSRAHPKLPGDQGGDSVDSDIEIDDVSDSEQEDGEDDEYDQLPP 1150
Query: 666 FKRLTKAQLAKLNHAQRKAYLEELDYREKLFYKKQLKXXXXXXXXXXXXXXXXSARTDDF 725
FK L K QLAKL++ QRKAY EE DYR KL KKQ + +F
Sbjct: 1151 FKPLRKTQLAKLSNEQRKAYFEEYDYRVKLLQKKQWREELKRMKEMKKNGKKLGES--EF 1208
Query: 726 SNSNLEDD--GSAPTNVAVPMPDMVLPSSFDSDHPSHRYRFLDTPSEWLVRPVLETQGWD 783
EDD AP V VP+PDMVLP SFDSD+ ++RYR+L+ S+ L RPVL+T GWD
Sbjct: 1209 GYPGEEDDPENGAPAAVPVPLPDMVLPPSFDSDNSAYRYRYLEPTSQLLTRPVLDTHGWD 1268
Query: 784 HDVGYEGLNVERLFAVKGKVPLSVSGQLSKDKKDCSLQMEVASSLKHGEGKTTSLGLDLQ 843
HD GY+G+N E A+ + P + + Q++KDKK+ ++ ++ + S KHGE +T G D+Q
Sbjct: 1269 HDCGYDGVNAEHSLALASRFPATATVQVTKDKKEFNIHLDSSVSAKHGENGSTMAGFDIQ 1328
Query: 844 SVGKDMAYTLRGESRFKNFRRNNTAAGISATLLGDSVSAGVKVEDKLVVNKQLRVLVSGG 903
+VGK +AY +RGE++FKN R+N T G S T LG++++ GVK+ED++ + K+L ++ S G
Sbjct: 1329 NVGKQLAYVVRGETKFKNLRKNKTTVGGSVTFLGENIATGVKLEDQIALGKRLVLVGSTG 1388
Query: 904 AMSGRGDVAYGGRLEATLKDKDYPIGRMLSTIALSVVDWHGDLAVGCNIQSQIPAGRASN 963
M +GD AYG LE L++ D+PIG+ S+ LS+V W GDLA+G N+QSQ+ GR S
Sbjct: 1389 TMRSQGDSAYGANLEVRLREADFPIGQDQSSFGLSLVKWRGDLALGANLQSQVSVGRNSK 1448
Query: 964 LIGHANLSNKGTGQVGIRLNSSEHLEIALIALVPIYQNIKKLLQ 1007
+ A L+NK +GQ+ +R +SS+ L+IAL A++PI +I K ++
Sbjct: 1449 IALRAGLNNKMSGQITVRTSSSDQLQIALTAILPIAMSIYKSIR 1492
>AT5G20300.1 | chr5:6853544-6856332 REVERSE LENGTH=794
Length = 793
Score = 515 bits (1326), Expect = e-146, Method: Compositional matrix adjust.
Identities = 285/713 (39%), Positives = 411/713 (57%), Gaps = 60/713 (8%)
Query: 314 KLQMIRVKFLRLANRFGQTPNNMVVSQVLYRLGLAEQLRRNTGQ---GVFSFDRAQDMAE 370
K+ ++V+FLRL RFGQ+ NN++VS+VLYR+ LA +R + DRA+ +A
Sbjct: 94 KIGGLQVQFLRLVQRFGQSQNNILVSKVLYRVHLAMLIRAEESELKNVKLRQDRAKALAR 153
Query: 371 RLEAAGNEPLDFSCTILVLGKTGVGKSATINSIFDDVRLETNAFDTSTRKVQEVVGAVEG 430
E++G LDFS ILVLGKTGVGKSATINSIF + ET+AF T +++EV+G V G
Sbjct: 154 EQESSGIPELDFSLRILVLGKTGVGKSATINSIFGQPKSETDAFRPGTDRIEEVMGTVSG 213
Query: 431 IKVKVIDTPGLS-CSSSDQHHNQKILNSVKRLISRNPPDIVLYFDRLDMQTRDYGDVPLL 489
+KV IDTPG SSS N+KIL S+KR + + PPD+VLY DRLDM Y D LL
Sbjct: 214 VKVTFIDTPGFHPLSSSSTRKNRKILLSIKRYVKKRPPDVVLYLDRLDMIDMRYSDFSLL 273
Query: 490 QTITRVFGASIWFNAIVVLTHAASAPPDGLNGIPLSYEMFVTQRSHVVQQAIRQAAGDVR 549
Q IT +FGA+IW N I+V+TH+A A +G NG ++YE +V QR VVQ I QA D +
Sbjct: 274 QLITEIFGAAIWLNTILVMTHSA-ATTEGRNGQSVNYESYVGQRMDVVQHYIHQAVSDTK 332
Query: 550 LMNPVSLVENHSACRTNRAGQRVLPNGHVWKPQLLLLCFASKVLAEANALLKLQDNPA-G 608
L NPV LVENH +C+ N AG+ VLPNG VWKPQ + LC +KVL + +LL+ +D+ G
Sbjct: 333 LENPVLLVENHPSCKKNLAGEYVLPNGVVWKPQFMFLCVCTKVLGDVQSLLRFRDSIGLG 392
Query: 609 KP----------------RMRIXXXXXXXXXXXXXRAPLKLPEEQFGXXXXXXXXXXXXX 652
+P R R+ L L EE
Sbjct: 393 QPSSTRTASLPHLLSVFLRRRLSSGADETEKEIDKLLNLDLEEED--------------- 437
Query: 653 XXXXXXXXXXLPPFKRLTKAQLAKLNHAQRKAYLEELDYREKLFYKKQLKXXXXXXXXXX 712
LP + L K++ KL+ +Q+K YL+ELDYRE L+ KKQLK
Sbjct: 438 ------EYDQLPTIRILGKSRFEKLSKSQKKEYLDELDYRETLYLKKQLKEECRR----- 486
Query: 713 XXXXXXSARTDD--FSNSNLEDDGSAPTNVAVPMPDMVLPSSFDSDHPSHRYRFLDTPSE 770
R D+ NLED AVP+PDM P SFDSD P+HRYR + +
Sbjct: 487 --------RRDEKLVEEENLEDT-EQRDQAAVPLPDMAGPDSFDSDFPAHRYRCVSAGDQ 537
Query: 771 WLVRPVLETQGWDHDVGYEGLNVERLFAVKGKVPLSVSGQLSKDKKDCSLQMEV-ASSLK 829
WLVRPV + QGWD DVG++G+N+E + + S +GQ+S+DK+ ++Q E A+ +
Sbjct: 538 WLVRPVYDPQGWDRDVGFDGINIETAAKINRNLFASATGQVSRDKQRFTIQSETNAAYTR 597
Query: 830 HGEGKTTSLGLDLQSVGKDMAYTLRGESRFKNFRRNNTAAGISATLLGDSVSAGVKVEDK 889
+ +T S+ +DLQS G+D+ Y+ +G ++ + F+ N T G+ T G G K+ED
Sbjct: 598 NFREQTFSVAVDLQSSGEDLVYSFQGGTKLQTFKHNTTDVGVGLTSFGGKYYVGGKLEDT 657
Query: 890 LVVNKQLRVLVSGGAMSGRGDVAYGGRLEATLKDKDYPIGRMLSTIALSVVDWHGDLAVG 949
L+V K++++ + G M G G A GG EA ++ +DYP+ + ++ + + +L +
Sbjct: 658 LLVGKRVKLTANAGQMRGSGQTANGGSFEACIRGRDYPVRNEQIGLTMTALSFKRELVLN 717
Query: 950 CNIQSQIPAGRASNLIGHANLSNKGTGQVGIRLNSSEHLEIALIALVPIYQNI 1002
+Q+Q R +N+ + N++N+ G++ ++LNSSEH EIALI+ + +++ +
Sbjct: 718 YGLQTQFRPARGTNIDVNINMNNRKMGKINVKLNSSEHWEIALISALTMFKAL 770
>AT5G05000.2 | chr5:1474262-1475772 REVERSE LENGTH=314
Length = 313
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 112/207 (54%), Gaps = 13/207 (6%)
Query: 383 SCTILVLGKTGVGKSATINSIFDDVRLETNAFDTSTRKVQEVVGAVEGIKVKVIDTPGLS 442
S T+LV+GK GVGKS+T+NS+ + + F + + V G + +IDTPGL
Sbjct: 38 SLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRTRSGFTLNIIDTPGLI 97
Query: 443 CSSSDQHHNQKILNSVKRLISRNPPDIVLYFDRLDMQTRDYGDVPLLQTITRVFGASIWF 502
+ N + +N +KR + D++LY DRLD+ D D ++ IT FG IW
Sbjct: 98 ---EGGYVNDQAINIIKRFLLNMTIDVLLYVDRLDVYRVDDLDRQVVGAITDAFGKEIWK 154
Query: 503 NAIVVLTHAASAPPDGLNGIPLSYEMFVTQRSHVVQQAIRQAA----GDVRLMN-PVSLV 557
+ +VLTHA +PPDGLN Y FV++RS+ + + I+ A D++ + PV LV
Sbjct: 155 KSALVLTHAQFSPPDGLN-----YNHFVSKRSNALLKVIQTGAQLKKQDLQGFSIPVILV 209
Query: 558 ENHSACRTNRAGQRVLPNGHVWKPQLL 584
EN C N + +++LP G W P L
Sbjct: 210 ENSGRCHKNESDEKILPCGTSWIPNLF 236
>AT1G02280.1 | chr1:448665-450246 REVERSE LENGTH=298
Length = 297
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 106/208 (50%), Gaps = 15/208 (7%)
Query: 383 SCTILVLGKTGVGKSATINSIFDDVRLETNAFDTSTRKVQEVVGAVEGIKVKVIDTPGLS 442
S T+LVLGK GVGKS+T+NS+ + + + F + V + G + +IDTPGL
Sbjct: 36 SMTVLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTMGGFTINIIDTPGLV 95
Query: 443 CSSSDQHHNQKILNSVKRLISRNPPDIVLYFDRLDMQTRDYGDVPLLQTITRVFGASIWF 502
+ + N + L +K + D++LY DRLD+ D D ++ IT+ FG IW
Sbjct: 96 EAG---YVNHQALELIKGFLVNRTIDVLLYVDRLDVYRVDELDKQVVIAITQTFGKEIWC 152
Query: 503 NAIVVLTHAASAPPDGLNGIPLSYEMFVTQRSHVVQQAIRQAAGDVRLMN------PVSL 556
++VLTHA +PPD LSYE F ++RS + + IR A +R V
Sbjct: 153 KTLLVLTHAQFSPPD-----ELSYETFSSKRSDSLLKTIR-AGSKMRKQEFEDSAIAVVY 206
Query: 557 VENHSACRTNRAGQRVLPNGHVWKPQLL 584
EN C N ++ LPNG W P L+
Sbjct: 207 AENSGRCSKNDKDEKALPNGEAWIPNLV 234
>AT4G15810.1 | chr4:8989162-8992591 REVERSE LENGTH=919
Length = 918
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 83/144 (57%), Gaps = 4/144 (2%)
Query: 313 EKLQMIRVKFLRLANRFGQTPNNMVVSQVLYRLGLAEQLRRNTGQGV-FSFDRAQDMAER 371
EK Q+++ K R+ R + N V++V ++ LA T G+ FD + +
Sbjct: 561 EKTQLLKEKLQRIIRRTCLSRENSTVTKVASKMSLAGG-EHPTSLGLDHMFDGTKIVLPE 619
Query: 372 LEAAGNEPLDFSCTILVLGKTGVGKSATINSIFDDVRLETNAFDTSTRKVQEVVGAVEGI 431
E + LDFS +LV+GKTGVGKSAT+NSIF + + AF +T VVG V GI
Sbjct: 620 QEFPAD--LDFSINVLVIGKTGVGKSATVNSIFGETKSAVGAFGVTTNSANYVVGNVGGI 677
Query: 432 KVKVIDTPGLSCSSSDQHHNQKIL 455
++ ++DTPGL S++++ NQ++L
Sbjct: 678 QISILDTPGLLSSATEEQFNQEVL 701
>AT4G02482.1 | chr4:1092002-1092484 FORWARD LENGTH=135
Length = 134
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 54/89 (60%)
Query: 910 DVAYGGRLEATLKDKDYPIGRMLSTIALSVVDWHGDLAVGCNIQSQIPAGRASNLIGHAN 969
D +Y G LE L++ D+PIG+ + +S+ + DL V N++ Q+ GR + + +
Sbjct: 44 DSSYEGNLELRLREADFPIGQNQPHMGVSLKNSKDDLTVTANLRHQVSVGRQTKVTTFVS 103
Query: 970 LSNKGTGQVGIRLNSSEHLEIALIALVPI 998
L +K TG +R NSS+ L+IA++AL+ +
Sbjct: 104 LDSKRTGCFTVRTNSSDQLQIAVMALLLL 132
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.313 0.131 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 18,939,685
Number of extensions: 764394
Number of successful extensions: 2203
Number of sequences better than 1.0e-05: 8
Number of HSP's gapped: 2190
Number of HSP's successfully gapped: 9
Length of query: 1008
Length of database: 11,106,569
Length adjustment: 108
Effective length of query: 900
Effective length of database: 8,145,641
Effective search space: 7331076900
Effective search space used: 7331076900
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 117 (49.7 bits)