BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0727600 Os03g0727600|AK071011
(487 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0727600 1-aminocyclopropane-1-carboxylate synthase 1 (... 947 0.0
Os05g0196600 499 e-141
Os05g0319200 495 e-140
Os04g0578000 Similar to 1-aminocyclopropane-1-carboxylate s... 478 e-135
Os01g0192900 1-aminocyclopropane-1-carboxylate synthase fam... 465 e-131
Os06g0130400 Similar to 1-aminocyclopropane-1-carboxylate s... 402 e-112
Z27243 146 4e-35
Z27244 141 1e-33
Os09g0453800 1-aminocyclopropane-1-carboxylate synthase fam... 67 3e-11
Os07g0108300 Similar to Alanine aminotransferase 65 9e-11
>Os03g0727600 1-aminocyclopropane-1-carboxylate synthase 1 (EC 4.4.1.14) (ACC
synthase 1) (S-adenosyl-L-methionine
methylthioadenosine-lyase 1)
Length = 487
Score = 947 bits (2447), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/487 (96%), Positives = 471/487 (96%)
Query: 1 MVSQVVAEEKPQLLSKKAGCNSHGQDSSYFLGWQEYEKNPFDPVSNPSGIIQMGLAENQL 60
MVSQVVAEEKPQLLSKKAGCNSHGQDSSYFLGWQEYEKNPFDPVSNPSGIIQMGLAENQL
Sbjct: 1 MVSQVVAEEKPQLLSKKAGCNSHGQDSSYFLGWQEYEKNPFDPVSNPSGIIQMGLAENQL 60
Query: 61 SFDLLEEWLEKNPHALGLRREGGGASVFRELALFQDYHGLPAFKNALARFMSEQRGYKVV 120
SFDLLEEWLEKNPHALGLRREGGGASVFRELALFQDYHGLPAFKNALARFMSEQRGYKVV
Sbjct: 61 SFDLLEEWLEKNPHALGLRREGGGASVFRELALFQDYHGLPAFKNALARFMSEQRGYKVV 120
Query: 121 FDPSNIVLTAGATSANEALMFCLADHGDAFLIPTPYYPGFDRDLKWRTGAEIVPVHCASA 180
FDPSNIVLTAGATSANEALMFCLADHGDAFLIPTPYYPGFDRDLKWRTGAEIVPVHCASA
Sbjct: 121 FDPSNIVLTAGATSANEALMFCLADHGDAFLIPTPYYPGFDRDLKWRTGAEIVPVHCASA 180
Query: 181 NGFRVTRPALDDAYRRAQKRRLRVKGVLITNPSNPLGTASPRADLETIVDFVAAKGIHLI 240
NGFRVTRPALDDAYRRAQKRRLRVKGVLITNPSNPLGTASPRADLETIVDFVAAKGIHLI
Sbjct: 181 NGFRVTRPALDDAYRRAQKRRLRVKGVLITNPSNPLGTASPRADLETIVDFVAAKGIHLI 240
Query: 241 SDEIYAGTAFAEPPAGFVSALEXXXXXXXXXXXXXXXXHVVYSLSKDLGLPGFRVGAIYS 300
SDEIYAGTAFAEPPAGFVSALE HVVYSLSKDLGLPGFRVGAIYS
Sbjct: 241 SDEIYAGTAFAEPPAGFVSALEVVAGRDGGGADVSDRVHVVYSLSKDLGLPGFRVGAIYS 300
Query: 301 ANAAVVSAATKMSSFGLVSSQTQYLLAALLGDRDFTRSYVAENKRRIKERHDQLVDGLRE 360
ANAAVVSAATKMSSFGLVSSQTQYLLAALLGDRDFTRSYVAENKRRIKERHDQLVDGLRE
Sbjct: 301 ANAAVVSAATKMSSFGLVSSQTQYLLAALLGDRDFTRSYVAENKRRIKERHDQLVDGLRE 360
Query: 361 IGIGCLPSNAGLFCWVDMSHLMRSRSFAGEMELWKKVVFEVGLNISPGSSCHCREPGWFR 420
IGIGCLPSNAGLFCWVDMSHLMRSRSFAGEMELWKKVVFEVGLNISPGSSCHCREPGWFR
Sbjct: 361 IGIGCLPSNAGLFCWVDMSHLMRSRSFAGEMELWKKVVFEVGLNISPGSSCHCREPGWFR 420
Query: 421 VCFANMSAKTLDVAMQRLRSFVDSATGGGDNAALRRAAVPVRSVSCPLAIKWALRLTPSI 480
VCFANMSAKTLDVAMQRLRSFVDSATGGGDNAALRRAAVPVRSVSCPLAIKWALRLTPSI
Sbjct: 421 VCFANMSAKTLDVAMQRLRSFVDSATGGGDNAALRRAAVPVRSVSCPLAIKWALRLTPSI 480
Query: 481 ADRKAER 487
ADRKAER
Sbjct: 481 ADRKAER 487
>Os05g0196600
Length = 437
Score = 499 bits (1285), Expect = e-141, Method: Compositional matrix adjust.
Identities = 254/428 (59%), Positives = 302/428 (70%), Gaps = 13/428 (3%)
Query: 22 SHGQDSSYFLGWQEYEKNPFDPVSNPSGIIQMGLAENQLSFDLLEEWLEKNPHALGLRRE 81
+HG+DS YF GW+ Y+++P+DP++NP G+IQMGLAENQ+SFDLLEE++ ++P A
Sbjct: 6 AHGEDSPYFAGWRAYDEDPYDPITNPQGVIQMGLAENQVSFDLLEEYMREHPEA-----S 60
Query: 82 GGGASVFRELALFQDYHGLPAFKNALARFMSEQRGYKVVFDPSNIVLTAGATSANEALMF 141
GA V RE ALFQDYHGL +F+ A+A FM RG K FDP +VLTAGAT+ANE L F
Sbjct: 61 DCGAGV-RENALFQDYHGLKSFRKAMASFMETIRGGKARFDPDRVVLTAGATAANELLTF 119
Query: 142 CLADHGDAFLIPTPYYPGFDRDLKWRTGAEIVPVHCASANGFRVTRPALDDAYRRAQKRR 201
LAD GDA L+PTPYYPGFDRDL+WRTG IVPV C SA GF+VT AL AY A
Sbjct: 120 ILADPGDALLVPTPYYPGFDRDLRWRTGVNIVPVSCDSAAGFQVTAGALRAAYDEAVAAG 179
Query: 202 LRVKGVLITNPSNPLGTASPRADLETIVDFVAAKGIHLISDEIYAGTAFAEPP----AGF 257
RV+GVLITNPSNPLGT + R LE I+DFVA +HLISDEIY+G+ FA P A
Sbjct: 180 TRVRGVLITNPSNPLGTTAARGVLEGILDFVARHDMHLISDEIYSGSVFAAPDLVSVAEL 239
Query: 258 VSALEXXXXXXXXXXXXXXXXHVVYSLSKDLGLPGFRVGAIYSANAAVVSAATKMSSFGL 317
V HVVYSLSKDLGLPGFRVG +YS N AVV+AA +MSSF L
Sbjct: 240 VDERRRARGGAADAEDIARRVHVVYSLSKDLGLPGFRVGVVYSYNDAVVAAARRMSSFTL 299
Query: 318 VSSQTQYLLAALLGDRDFTRSYVAENKRRIKERHDQLVDGLREIGIGCL-PSNAGLFCWV 376
VSSQTQ LAA+L D F +YV N+ R++ERH + V GLR G+ CL +NAGLF WV
Sbjct: 300 VSSQTQRTLAAMLSDAAFAAAYVRSNRDRLRERHARAVAGLRRAGVACLRGANAGLFVWV 359
Query: 377 DMSHLM--RSRSFAGEMELWKKVVFEVGLNISPGSSCHCREPGWFRVCFANMSAKTLDVA 434
DM L+ + AGE+ LW++VV E LNISPGSSCHCREPGWFRVCFANMS +TLDVA
Sbjct: 360 DMRRLLGDGEATVAGELRLWRRVVAEAKLNISPGSSCHCREPGWFRVCFANMSLETLDVA 419
Query: 435 MQRLRSFV 442
+ RL F+
Sbjct: 420 LHRLGCFI 427
>Os05g0319200
Length = 496
Score = 495 bits (1275), Expect = e-140, Method: Compositional matrix adjust.
Identities = 254/446 (56%), Positives = 311/446 (69%), Gaps = 16/446 (3%)
Query: 14 LSKKAGCNSHGQDSSYFLGWQEYEKNPFDPVSNPSGIIQMGLAENQLSFDLLEEWLEKNP 73
LS+ A +HG+ S YF GW+ Y+++P+D +NP G+IQMGLAENQ+S DLLE +L ++P
Sbjct: 19 LSRVATSAAHGEGSPYFAGWKAYDEDPYDAAANPDGVIQMGLAENQVSIDLLEGYLREHP 78
Query: 74 HAL--GLRREGGGASVFRELALFQDYHGLPAFKNALARFMSEQRGYKVVFDPSNIVLTAG 131
A G+ +GGG S FR+ ALFQDYHGL F+ A+ARFM + G K FDP IVLTAG
Sbjct: 79 EAAAWGVAGDGGGDS-FRDNALFQDYHGLANFRKAMARFMEKIMGGKATFDPDRIVLTAG 137
Query: 132 ATSANEALMFCLADHGDAFLIPTPYYPGFDRDLKWRTGAEIVPVHCASANGFRVTRPALD 191
AT+ANE L F LAD DA LIPTPYYPGFDRDL+WRTG +VPVHC SANGF+VT AL
Sbjct: 138 ATAANELLTFILADPRDALLIPTPYYPGFDRDLRWRTGVNVVPVHCDSANGFQVTAAALQ 197
Query: 192 DAYRRAQKRRLRVKGVLITNPSNPLGTASPRADLETIVDFVAAKGIHLISDEIYAGTAFA 251
A+ A +RV+GVLITNPSNPLGT + R LE I+ FVA IHL+SDEIY+G+ FA
Sbjct: 198 AAHDEAAAAGMRVRGVLITNPSNPLGTTARREALEGILGFVARNDIHLVSDEIYSGSVFA 257
Query: 252 EPPAGFVSALEXXXXXXX--------XXXXXXXXXHVVYSLSKDLGLPGFRVGAIYSANA 303
P V+ L HVVYSLSKDLGLPGFRVG +YS N
Sbjct: 258 APDLVSVAELVESSSSRARHRGEDDDGDVGVADRVHVVYSLSKDLGLPGFRVGVVYSRND 317
Query: 304 AVVSAATKMSSFGLVSSQTQYLLAALLGDRDFTRSYVAENKRRIKERHDQLVDGLREIGI 363
AVV+AA +MSSF LVSSQTQ LAA+L D F +YVA N+ R++ERHD +V GL G+
Sbjct: 318 AVVAAARRMSSFTLVSSQTQRTLAAVLSDEAFVDAYVAANRARLRERHDHVVAGLARAGV 377
Query: 364 GCLPSNAGLFCWVDMSHLM-----RSRSFAGEMELWKKVVFEVGLNISPGSSCHCREPGW 418
CL NAGLF W+DM L+ + +FAGE+ LW +++ EV LN+SPGSSCHC EPGW
Sbjct: 378 PCLRGNAGLFVWMDMRRLLLGDGGDAATFAGELRLWDRLLREVKLNVSPGSSCHCSEPGW 437
Query: 419 FRVCFANMSAKTLDVAMQRLRSFVDS 444
FRVCFANMS TLDVA++R+ F+D+
Sbjct: 438 FRVCFANMSLATLDVALERISRFMDA 463
>Os04g0578000 Similar to 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14)
(Fragment)
Length = 483
Score = 478 bits (1230), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/437 (53%), Positives = 301/437 (68%), Gaps = 6/437 (1%)
Query: 6 VAEEKPQLLSKKAGCNSHGQDSSYFLGWQEYEKNPFDPVSNPSGIIQMGLAENQLSFDLL 65
+A + LLS KA + HG++SSYF GW+ Y+ NPFD N G+IQMGLAENQLS DL+
Sbjct: 1 MAYQGIDLLSTKAAGDDHGENSSYFDGWKAYDTNPFDLRHNRGGVIQMGLAENQLSLDLI 60
Query: 66 EEWLEKNPHALGLRREGGGASVFRELALFQDYHGLPAFKNALARFMSEQRGYKVVFDPSN 125
EEW + +P A EG S F+ +A FQDYHGLP F+ A+A+FM + RG K FDP
Sbjct: 61 EEWSKNHPEASICTPEG--VSQFKRIANFQDYHGLPEFRKAMAQFMGQVRGGKATFDPDR 118
Query: 126 IVLTAGATSANEALMFCLADHGDAFLIPTPYYPGFDRDLKWRTGAEIVPVHCASANGFRV 185
+V++ GAT A E L FCLA+ G+AFL+PTPYYP FDRD WR+G +++P+ C S N FR+
Sbjct: 119 VVMSGGATGAQETLAFCLANPGEAFLVPTPYYPAFDRDCCWRSGIKLLPIECHSFNDFRL 178
Query: 186 TRPALDDAYRRAQKRRLRVKGVLITNPSNPLGTASPRADLETIVDFVAAKGIHLISDEIY 245
T+ AL AY A+++ + VKG+LITNPSNPLGT + R L + F +HL+ DEIY
Sbjct: 179 TKEALVSAYDGARRQGISVKGILITNPSNPLGTITDRDTLAMLATFATEHRVHLVCDEIY 238
Query: 246 AGTAFAEPPAGFVSALEXXXXXXXXXXXXXXXXHVVYSLSKDLGLPGFRVGAIYSANAAV 305
AG+ FA P +VS E HVVYSLSKD GLPGFRVG IYS N AV
Sbjct: 239 AGSVFATPE--YVSIAEVIERDVPWCNRDLI--HVVYSLSKDFGLPGFRVGIIYSYNDAV 294
Query: 306 VSAATKMSSFGLVSSQTQYLLAALLGDRDFTRSYVAENKRRIKERHDQLVDGLREIGIGC 365
V+AA +MSSFGLVSSQTQY LA +L D +F ++ E+K R+ RH++ GLRE+GIGC
Sbjct: 295 VAAARRMSSFGLVSSQTQYFLARMLSDEEFIGRFLQESKCRLVARHERFTSGLREVGIGC 354
Query: 366 LPSNAGLFCWVDMSHLMRSRSFAGEMELWKKVVFEVGLNISPGSSCHCREPGWFRVCFAN 425
L NAGLF W+D+ ++R ++ E+ELW+ +V +V LN+SPG+S HCREPGWFRVC AN
Sbjct: 355 LRGNAGLFSWMDLRRMLREKTAEAELELWRVIVHQVKLNVSPGTSFHCREPGWFRVCHAN 414
Query: 426 MSAKTLDVAMQRLRSFV 442
M +T++VA+ R+ FV
Sbjct: 415 MDDETMEVALGRIHDFV 431
>Os01g0192900 1-aminocyclopropane-1-carboxylate synthase family protein
Length = 461
Score = 465 bits (1196), Expect = e-131, Method: Compositional matrix adjust.
Identities = 248/435 (57%), Positives = 302/435 (69%), Gaps = 5/435 (1%)
Query: 14 LSKKAGCNSHGQDSSYFLGWQEYEKNPFDPVSNPSGIIQMGLAENQLSFDLLEEWLEKNP 73
LS+ A +HG+DS YF GW+ Y+++P+ V NP G+IQMGLAENQ+SFDLLE +L +P
Sbjct: 18 LSQVATSAAHGEDSPYFAGWKAYDEDPYHAVDNPDGVIQMGLAENQVSFDLLEAYLRDHP 77
Query: 74 HALGLRREGGGASVFRELALFQDYHGLPAFKNALARFMSEQRGYKVVFDPSNIVLTAGAT 133
A G G GA FR+ ALFQDYHGL +F+ A+A FM + RG K FDP +IVLTAGAT
Sbjct: 78 EAAGWSTGGAGAGSFRDNALFQDYHGLKSFRKAMASFMGKIRGGKARFDPDHIVLTAGAT 137
Query: 134 SANEALMFCLADHGDAFLIPTPYYPGFDRDLKWRTGAEIVPVHCASANGFRVTRPALDDA 193
+ANE L F LA+ GDA LIPTPYYPGFDRDL+WRTG IVPV C SANGF+VT AL A
Sbjct: 138 AANELLTFILANPGDALLIPTPYYPGFDRDLRWRTGVNIVPVRCDSANGFQVTVAALQAA 197
Query: 194 YRRAQKRRLRVKGVLITNPSNPLGTASPRADLETIVDFVAAKGIHLISDEIYAGTAFAEP 253
Y A +R + VLITNPSNPLGT R L+ I+DFV+ IHLISDEIY+G+ FA P
Sbjct: 198 YDEAAAVGMRARAVLITNPSNPLGTTVRRKMLDDILDFVSRNDIHLISDEIYSGSVFAAP 257
Query: 254 PAGFVSALEXXXXXXXXXXXXXXXXHVVYSLSKDLGLPGFRVGAIYSANAAVVSAATKMS 313
V+ L H+VYSLSKDLGLPGFRVG +YS N AVV+AA +MS
Sbjct: 258 DLVSVAEL----VEARGGDGIAGRVHIVYSLSKDLGLPGFRVGVVYSYNDAVVTAARRMS 313
Query: 314 SFGLVSSQTQYLLAALLGDRDFTRSYVAENKRRIKERHDQLVDGLREIGIGCLPSNAGLF 373
SF LVSSQTQ LAA+L D F Y+ N+RR++ERH+ +V GL G+ CL NAGLF
Sbjct: 314 SFTLVSSQTQKTLAAMLSDEAFAGEYIRTNRRRLRERHEHVVAGLARAGVPCLRGNAGLF 373
Query: 374 CWVDM-SHLMRSRSFAGEMELWKKVVFEVGLNISPGSSCHCREPGWFRVCFANMSAKTLD 432
W+DM L+ GE+ LW+K++ + LNISPGSSCHC E GWFRVCFANMS TLD
Sbjct: 374 VWMDMRRLLLGGGGVGGELRLWEKLLRQAKLNISPGSSCHCSEAGWFRVCFANMSLDTLD 433
Query: 433 VAMQRLRSFVDSATG 447
+A+ R+ F+D+ G
Sbjct: 434 LALHRISRFMDTWNG 448
>Os06g0130400 Similar to 1-aminocyclopropane-1-carboxylate synthase (EC 4.4.1.14)
(Fragment)
Length = 542
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/432 (46%), Positives = 275/432 (63%), Gaps = 13/432 (3%)
Query: 19 GCNSHGQDSSYFLGWQEYEKNPFDPVSNPSGIIQMGLAENQLSFDLLEEWLEKNPHALGL 78
G + DS Y+ G + +P+ PV+NPSGIIQ+GLAEN LS DL+ W+E+ HA
Sbjct: 113 GASVRDDDSLYYAGLRRCAADPYHPVTNPSGIIQLGLAENYLSLDLVGRWMEE--HAAEA 170
Query: 79 RREGGGAS------VFRELALFQDYHGLPAFKNALARFMSEQRGYKVVFDPSNIVLTAGA 132
GG R LA +Q Y G+ A K ALA FM + V F+PS +V+T+GA
Sbjct: 171 ASMAGGEDEDERELSIRGLAAYQPYDGILALKMALAGFMRQIMQGSVSFEPSQVVITSGA 230
Query: 133 TSANEALMFCLADHGDAFLIPTPYYPGFDRDLKWRTGAEIVPVHCASANGFRVTRPALDD 192
T A E L FCLAD G+AFL+P+PYYPG+DRD+KWRTG E++PV C S + F ++ AL+
Sbjct: 231 TPAMEILSFCLADPGNAFLVPSPYYPGWDRDIKWRTGIELIPVPCRSTDNFNISITALEI 290
Query: 193 AYRRAQKRRLRVKGVLITNPSNPLGTASPRADLETIVDFVAAKGIHLISDEIYAGTAFAE 252
AY +A+KR ++V+GVLI+NP+NP G+ P+ L +++F A K IHLISDE++AG+ +
Sbjct: 291 AYNQAKKRGIKVRGVLISNPNNPTGSFVPKQTLHDLLEFAAEKNIHLISDEVFAGSTYGS 350
Query: 253 PPAGFVSALEXXXXXXXXXXXXXXXXHVVYSLSKDLGLPGFRVGAIYSANAAVVSAATKM 312
FVS E H++Y LSKDL L GFRVG IYS N ++V+AA K+
Sbjct: 351 --GKFVSVAE---VVDDLEDFDKGRVHIIYGLSKDLSLAGFRVGVIYSYNESIVTAAAKI 405
Query: 313 SSFGLVSSQTQYLLAALLGDRDFTRSYVAENKRRIKERHDQLVDGLREIGIGCLPSNAGL 372
+ F VS+ TQ LL A+L D+ F Y+ N+ R+++ + VD L ++GI C S+ G
Sbjct: 406 ARFSSVSTPTQRLLVAMLSDQKFISDYLKVNRERLRKMYHLFVDALDQVGIECYKSSGGF 465
Query: 373 FCWVDMSHLMRSRSFAGEMELWKKVVFEVGLNISPGSSCHCREPGWFRVCFANMSAKTLD 432
+CW DMS +RS S GE +LW +++ E +N++PGSSCHC EPGWFR CF +S +
Sbjct: 466 YCWADMSKFIRSYSEKGERKLWDRLLEEAKVNVTPGSSCHCIEPGWFRCCFTTLSEHDIP 525
Query: 433 VAMQRLRSFVDS 444
V +QRLR+ DS
Sbjct: 526 VLVQRLRTITDS 537
>Z27243
Length = 124
Score = 146 bits (368), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 64/124 (51%), Positives = 88/124 (70%)
Query: 295 VGAIYSANAAVVSAATKMSSFGLVSSQTQYLLAALLGDRDFTRSYVAENKRRIKERHDQL 354
VG +YS N VVS A +MSSFGLVSSQTQ LAA+L D+ F +++ E +R+ +RH
Sbjct: 1 VGVVYSYNDVVVSCARRMSSFGLVSSQTQSFLAAMLSDQSFVDNFLVEVSKRVAKRHHMF 60
Query: 355 VDGLREIGIGCLPSNAGLFCWVDMSHLMRSRSFAGEMELWKKVVFEVGLNISPGSSCHCR 414
+GL E+GI CL SNAGLF +D+ H+++ ++F EM LW+ + +V +N+SPGSS HC
Sbjct: 61 TEGLEEMGISCLRSNAGLFVLMDLRHMLKDQTFDSEMALWRVTINKVKINVSPGSSFHCS 120
Query: 415 EPGW 418
EPGW
Sbjct: 121 EPGW 124
>Z27244
Length = 124
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 87/124 (70%)
Query: 295 VGAIYSANAAVVSAATKMSSFGLVSSQTQYLLAALLGDRDFTRSYVAENKRRIKERHDQL 354
VG +YS N VV A KMSSFGLVSSQTQ+L+A +L D +F ++ E+K R+ RH ++
Sbjct: 1 VGIVYSYNDRVVQIARKMSSFGLVSSQTQHLIAKMLSDEEFVDEFIRESKLRLAARHAEI 60
Query: 355 VDGLREIGIGCLPSNAGLFCWVDMSHLMRSRSFAGEMELWKKVVFEVGLNISPGSSCHCR 414
GL +GIG L + AGLF W+D+ +L+++ +F E ELW+ +V +V LN+SPG S HC
Sbjct: 61 TTGLDGLGIGWLKAKAGLFLWMDLRNLLKTATFDSETELWRVIVHQVKLNVSPGGSFHCH 120
Query: 415 EPGW 418
EPGW
Sbjct: 121 EPGW 124
>Os09g0453800 1-aminocyclopropane-1-carboxylate synthase family protein
Length = 466
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 142/350 (40%), Gaps = 38/350 (10%)
Query: 98 HGLPAFKNALARFMSEQRGYKVVFDPSN-IVLTAGATSANEALMFCLADHGDAFLIPTPY 156
+G+P +A+A + G +V DP + +T+G T A A + L + GD ++ P+
Sbjct: 143 YGVPELNSAIAERFLKDSGLQV--DPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPF 200
Query: 157 YPGFDRDLKWRTGAEIVPVHCASANGFRVTRPALDDAYRRAQKRRLRVKGVLITNPSNPL 216
Y ++ L GA + + + F V L A + + ++I P NP
Sbjct: 201 YDSYEATLSM-AGANVKAITLRPPD-FSVPLEELKAAVSK------NTRAIMINTPHNPT 252
Query: 217 GTASPRADLETIVDFVAAKGIHLISDEIYAGTAFAEPPAGFVSALEXXXXXXXXXXXXXX 276
G R +LE I + L +DE+Y AF E
Sbjct: 253 GKMFTREELEFIATLCKENDVLLFADEVYDKLAF-----------EADHISMASIPGMYE 301
Query: 277 XXHVVYSLSKDLGLPGFRVG-AIYSANAAVVSAATKMSSFGLVSSQT--QYLLAALLGDR 333
+ SL K L G+++G AI A + + SF ++ T Q AA L
Sbjct: 302 RTVTMNSLGKTFSLTGWKIGWAI--APPHLTWGVRQAHSFLTFATCTPMQAAAAAALRAP 359
Query: 334 DFTRSYVAENKRRIKERHDQLVDGLREIGIGCLPSNAGLFCWVDMSHLMRSRSFAGEMEL 393
D SY E +R + LV+GL++ G PS+ F VD + F ++E
Sbjct: 360 D---SYYEELRRDYGAKKALLVNGLKDAGFIVYPSSGTYFVMVDHTPF----GFDNDIEF 412
Query: 394 WKKVVFEVGLNISPGSSCHCR-EPG--WFRVCFANMSAKTLDVAMQRLRS 440
+ ++ EVG+ P S + E G R F +TL A++R+++
Sbjct: 413 CEYLIREVGVVAIPPSVFYLNPEDGKNLVRFTFCK-DDETLRAAVERMKT 461
>Os07g0108300 Similar to Alanine aminotransferase
Length = 485
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 4/163 (2%)
Query: 91 LALFQDYHGLPAFKNALARFMSEQRGYKVVFDPSNIVLTAGATSA-NEALMFCLADHGDA 149
L + D G+P + +A F+ + GY DP I LT GA+ + L + + D
Sbjct: 107 LGAYSDSRGIPGIRKEVAEFIERRDGYPS--DPELIYLTDGASKGVMQMLNTIIRNERDG 164
Query: 150 FLIPTPYYPGFDRDLKWRTGAEIVPVHCASANGFRVTRPALDDAYRRAQKRRLRVKGVLI 209
L+P P YP + + G +VP + + + L A+ + + V+ ++I
Sbjct: 165 ILVPVPQYPLYSAAISL-FGGSLVPYYLEEEANWGLDFVNLRQTVASARSKGITVRAMVI 223
Query: 210 TNPSNPLGTASPRADLETIVDFVAAKGIHLISDEIYAGTAFAE 252
NP NP G +++ ++ F + + L++DE+Y + +
Sbjct: 224 INPGNPTGQCLSEGNIKELLKFCFHENLVLLADEVYQQNIYQD 266
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.321 0.135 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,750,251
Number of extensions: 707472
Number of successful extensions: 1545
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 1536
Number of HSP's successfully gapped: 10
Length of query: 487
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 382
Effective length of database: 11,553,331
Effective search space: 4413372442
Effective search space used: 4413372442
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 158 (65.5 bits)