BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0665700 Os03g0665700|Os03g0665700
(115 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0665700 Protein of unknown function DUF1677, plant fam... 238 7e-64
Os05g0509800 134 2e-32
Os03g0160300 Protein of unknown function DUF1677, plant fam... 98 1e-21
Os02g0229900 90 4e-19
Os03g0746900 Protein of unknown function DUF1677, plant fam... 86 5e-18
Os06g0554200 Protein of unknown function DUF1677, plant fam... 86 8e-18
Os05g0520500 81 1e-16
Os05g0202600 80 4e-16
Os01g0745000 80 5e-16
Os01g0200200 Protein of unknown function DUF1677, plant fam... 78 1e-15
Os01g0744750 72 8e-14
Os01g0199700 Protein of unknown function DUF1677, plant fam... 68 1e-12
Os03g0180100 Protein of unknown function DUF1677, plant fam... 67 3e-12
Os07g0613800 Protein of unknown function DUF1677, plant fam... 66 5e-12
Os03g0407100 Protein of unknown function DUF1677, plant fam... 65 2e-11
>Os03g0665700 Protein of unknown function DUF1677, plant family protein
Length = 115
Score = 238 bits (607), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 115/115 (100%), Positives = 115/115 (100%)
Query: 1 MEIESVKCECCGLREDCTQDYIASVRASFYGQWLCGLCCEAVRDEAGRKKAHPGVEEAVR 60
MEIESVKCECCGLREDCTQDYIASVRASFYGQWLCGLCCEAVRDEAGRKKAHPGVEEAVR
Sbjct: 1 MEIESVKCECCGLREDCTQDYIASVRASFYGQWLCGLCCEAVRDEAGRKKAHPGVEEAVR 60
Query: 61 AHMAFCRMFRSNPAVRVADGMRQMLRRRSGDMSKPDTSKKYSTVQVVDESSVSLY 115
AHMAFCRMFRSNPAVRVADGMRQMLRRRSGDMSKPDTSKKYSTVQVVDESSVSLY
Sbjct: 61 AHMAFCRMFRSNPAVRVADGMRQMLRRRSGDMSKPDTSKKYSTVQVVDESSVSLY 115
>Os05g0509800
Length = 110
Score = 134 bits (336), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 62/109 (56%), Positives = 83/109 (76%), Gaps = 1/109 (0%)
Query: 1 MEIESVKCECCGLREDCTQDYIASVRASFYGQWLCGLCCEAVRDEAGR-KKAHPGVEEAV 59
M+IESV+C CCGL EDCTQ+YI +V+A+F G+WLCGLC EAV DE + ++ G+E+A+
Sbjct: 1 MDIESVRCACCGLEEDCTQEYIENVKANFGGKWLCGLCSEAVGDELSKDRREQDGIEDAI 60
Query: 60 RAHMAFCRMFRSNPAVRVADGMRQMLRRRSGDMSKPDTSKKYSTVQVVD 108
+AHMAFCRM S+PAV+VADGM++MLR+RS D KP+ K + D
Sbjct: 61 KAHMAFCRMALSSPAVKVADGMKEMLRKRSKDKVKPEIPSKAHPFLLGD 109
>Os03g0160300 Protein of unknown function DUF1677, plant family protein
Length = 94
Score = 97.8 bits (242), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/91 (65%), Positives = 69/91 (75%), Gaps = 3/91 (3%)
Query: 1 MEIESVKCECCGLREDCTQDYIASVRASFYGQWLCGLCCEAVRDEA---GRKKAHPGVEE 57
ME+ES +CECC LRE+CT+ YI V+A F G+WLCGLC EAVRDEA GR + G+EE
Sbjct: 1 MEVESAECECCELREECTRGYILGVKADFGGRWLCGLCSEAVRDEAAKLGRNRGGGGMEE 60
Query: 58 AVRAHMAFCRMFRSNPAVRVADGMRQMLRRR 88
AVR HM+FC R NPA RVADGMRQML RR
Sbjct: 61 AVRDHMSFCGKCRKNPAFRVADGMRQMLLRR 91
>Os02g0229900
Length = 190
Score = 89.7 bits (221), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/111 (44%), Positives = 67/111 (60%), Gaps = 10/111 (9%)
Query: 3 IESVKCECCGLREDCTQDYIASVRASFYGQWLCGLCCEAVRDEAGRKKAHPGVEEAVRAH 62
+E +CECCG+ E+CT Y +VR F G+W+CGLC EAV +EA RKK E A+ AH
Sbjct: 67 VEEAECECCGMSEECTAAYAGAVRRRFSGRWVCGLCAEAVAEEA-RKKKGGEREAALAAH 125
Query: 63 MAFCRMF----RSNPAVRVADGMRQMLRRRS-----GDMSKPDTSKKYSTV 104
M CR F R++PA+ AD MR +LR+ S G +TS+++ T
Sbjct: 126 MGVCRRFNGFGRTHPALFQADAMRHILRKLSAAAAPGSPKPTNTSRRHLTT 176
>Os03g0746900 Protein of unknown function DUF1677, plant family protein
Length = 136
Score = 85.9 bits (211), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/75 (62%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Query: 18 TQDYIASVRASFYGQWLCGLCCEAVRDEAGRK--KAHPGVEEAVRAHMAFCRMF-RSNPA 74
T +Y+ VRA F G+WLCGLC EAV+ EAG+ +A VEEAVRAHMAFCRM R PA
Sbjct: 22 TGEYVGGVRAYFGGRWLCGLCSEAVKYEAGKSSPRAPVDVEEAVRAHMAFCRMLKRGGPA 81
Query: 75 VRVADGMRQMLRRRS 89
RVA+GM QMLR S
Sbjct: 82 ERVAEGMCQMLRTAS 96
>Os06g0554200 Protein of unknown function DUF1677, plant family protein
Length = 213
Score = 85.5 bits (210), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 46/92 (50%), Positives = 64/92 (69%), Gaps = 4/92 (4%)
Query: 2 EIESVKCECCGLREDCTQDYIASVRASFYGQWLCGLCCEAVRDEAGRKKAHPGVEEAVRA 61
E+E +CECCG+ E+CT +YI VRA F G+ +CGLC EAV +EA R+ GVE A+RA
Sbjct: 75 EVEDARCECCGMSEECTPEYIRGVRARFAGRLVCGLCAEAVAEEAARRGGAGGVEAALRA 134
Query: 62 HMAFCRMF----RSNPAVRVADGMRQMLRRRS 89
H A C+ F R++P + A+ MR++LR+RS
Sbjct: 135 HTAVCKRFNGFGRTHPVLFQAEAMREILRKRS 166
>Os05g0520500
Length = 133
Score = 81.3 bits (199), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 57/92 (61%), Gaps = 9/92 (9%)
Query: 2 EIESVKCECCGLREDCTQDYIASVRASFYGQWLCGLCCEAVRDEAGRKKAHPG--VEEAV 59
E SV+CECCG+ E+CT YI VR F+G+W+CGLC EAV++ R+K P V+ AV
Sbjct: 8 EARSVRCECCGMAEECTPRYIGRVRERFHGKWVCGLCSEAVKE---RQKREPALTVDGAV 64
Query: 60 RAHMAFCRMFRS----NPAVRVADGMRQMLRR 87
AH A C F S NP + +A MR + R+
Sbjct: 65 DAHAALCERFNSTVRLNPKLSLASSMRDIARK 96
>Os05g0202600
Length = 199
Score = 79.7 bits (195), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 5 SVKCECCGLREDCTQDYIASVRASFYGQWLCGLCCEAVRDEAGRKKAHPGVEEAVRAHMA 64
+V+C CC + E+CT YI +RA+ YG W+CGLC EAVR+ GVE A+R HM
Sbjct: 75 TVRCACCSVTEECTAAYIRHIRAAHYGDWVCGLCAEAVRERMRGGGGGGGVEAALRWHME 134
Query: 65 FCRMFRS----NPAVRVADGMRQMLRR 87
CR F S NP + +A MR + RR
Sbjct: 135 VCRDFNSTTRLNPKLSLAGSMRDIARR 161
>Os01g0745000
Length = 184
Score = 79.7 bits (195), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 57/95 (60%), Gaps = 9/95 (9%)
Query: 5 SVKCECCGLREDCTQDYIASVRASFYGQWLCGLCCEAVRDEAGRKKAHPGVEEAVRAHMA 64
SV+CECCG+ EDCT YI VR F G+W+CG+C EAV E R+ V EAV +H A
Sbjct: 64 SVRCECCGVAEDCTPTYIGRVRERFDGRWVCGICAEAV-SELRRRDPALAVREAVASHAA 122
Query: 65 FCRMF----RSNPAVRVADGMRQML----RRRSGD 91
C F R NPA+ + GMR ++ R RSGD
Sbjct: 123 LCAEFNATVRVNPALCLVRGMRDIVRISCRGRSGD 157
>Os01g0200200 Protein of unknown function DUF1677, plant family protein
Length = 285
Score = 77.8 bits (190), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 59/91 (64%), Gaps = 5/91 (5%)
Query: 2 EIESVKCECCGLREDCTQDYIASVRASFYGQWLCGLCCEAVRDEAGRKKA-HPGVEEAVR 60
E+E+V+C CCG+ E+CT YI VRA+F G WLCGLC EAV++ A R A GV A+
Sbjct: 140 EVETVRCACCGVAEECTAAYIGGVRAAFCGDWLCGLCSEAVKETARRDPAPGGGVAAALA 199
Query: 61 AHMAFCRMF----RSNPAVRVADGMRQMLRR 87
+H A CR F R NP + +A MR++ RR
Sbjct: 200 SHAAECRDFNATTRLNPTLSLAGSMRRIARR 230
>Os01g0744750
Length = 177
Score = 72.0 bits (175), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 5/86 (5%)
Query: 5 SVKCECCGLREDCTQDYIASVRASFYGQWLCGLCCEAVRDEAGRKKAHPGVEEAVRAHMA 64
SV+CECCG+ EDCT Y+ VRA F G+ +CGLC EAV E R++ V EAV +H +
Sbjct: 58 SVRCECCGMAEDCTPGYVRRVRARFEGRLVCGLCAEAV-SERRRREPALTVGEAVESHAS 116
Query: 65 FC----RMFRSNPAVRVADGMRQMLR 86
C R R NP + + MR + R
Sbjct: 117 LCDRFNRTVRLNPTLSLVRSMRDIAR 142
>Os01g0199700 Protein of unknown function DUF1677, plant family protein
Length = 204
Score = 68.2 bits (165), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 62/105 (59%), Gaps = 11/105 (10%)
Query: 3 IESVKCECCGLREDCTQDYIASVRASFYGQWLCGLCCEAVRDEAGRKKAHPGV------- 55
+E +CECCG++E+CT +Y VR + G+W+CGLC A EA R+ H G
Sbjct: 81 VEEARCECCGMQEECTPEYARRVRERYCGRWVCGLCAAAASAEADRRCRHGGTGWTTATA 140
Query: 56 EEAVRAHMAFC----RMFRSNPAVRVADGMRQMLRRRSGDMSKPD 96
EEA+ AHMA C R+ R+NP + + MR++LR+RS S D
Sbjct: 141 EEALAAHMAVCGRFNRVGRANPVLMQTEAMREILRKRSRSNSPRD 185
>Os03g0180100 Protein of unknown function DUF1677, plant family protein
Length = 141
Score = 67.0 bits (162), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 60/112 (53%), Gaps = 12/112 (10%)
Query: 8 CECCGLREDCTQDYIASVRASFYGQWLCGLCCEAVRDEAGRKKAHPG--------VEEAV 59
C CCGLRE+CT Y A VRA + G+WLCGLC EAV +E G VE A+
Sbjct: 30 CACCGLREECTPTYAAGVRARYGGRWLCGLCGEAVGEELAAAGGGAGDDGSVVVEVEAAI 89
Query: 60 RAHMAFCRMF--RSNPAV-RVADGMRQMLRRRSGDMSKPDTSKKYSTVQVVD 108
H AFCR RS A R+ +R++L R +G+ + + +K ++ D
Sbjct: 90 ARHAAFCRALGCRSPAAAERLIAAVRRLL-RGAGEGGRKEKAKAVVVLEFHD 140
>Os07g0613800 Protein of unknown function DUF1677, plant family protein
Length = 163
Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 38/63 (60%)
Query: 8 CECCGLREDCTQDYIASVRASFYGQWLCGLCCEAVRDEAGRKKAHPGVEEAVRAHMAFCR 67
CECCGL E+CT YIA VRA + G+W+CGLC +AV +E GR EA+ H C
Sbjct: 18 CECCGLTEECTAPYIAGVRARYEGRWICGLCGDAVGEELGRASPPISPAEALDRHAFVCG 77
Query: 68 MFR 70
R
Sbjct: 78 AGR 80
>Os03g0407100 Protein of unknown function DUF1677, plant family protein
Length = 170
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 8 CECCGLREDCTQDYIASVRASFYGQWLCGLCCEAVRDEAGRKKAHPGVEEAVRAHMAFCR 67
CECCG ++CT Y+A+VRA + G+W+CGLC +A +E GR EA+ H A CR
Sbjct: 24 CECCGFTQECTAPYMAAVRARYGGRWICGLCGDAAGEELGRADPPISPGEALDRHAAVCR 83
Query: 68 MFRS----NPAVRVAD---GMRQMLRRRSGD 91
R+ +P D +R +L RR G
Sbjct: 84 ARRASVPPSPEENAGDLIAAVRVLLLRRLGS 114
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.322 0.132 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,775,772
Number of extensions: 129972
Number of successful extensions: 415
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 401
Number of HSP's successfully gapped: 15
Length of query: 115
Length of database: 17,035,801
Length adjustment: 82
Effective length of query: 33
Effective length of database: 12,754,253
Effective search space: 420890349
Effective search space used: 420890349
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 149 (62.0 bits)