Os07g0613800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1677, plant family protein.
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Os07g0613800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF1677, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 89.75 | 0.445 | 8.63 | -0.978 | 0.251 | -0.903 | -1.63 | -2.1 | 0.321 | 22.5 | 21.4 | 1410 | -- | -- |
| 97.32 | 0.459 | 8.57 | -0.481 | 0.32 | -0.715 | -1.71 | -- | 0.455 | 22.7 | 21.9 | 1139 | -- | -- |
| 93.42 | 0.45 | 8.63 | -1.07 | 0.389 | -0.751 | -- | -2.16 | 0.297 | 22.9 | 21.8 | 901 | -- | -- |
| 107.82 | 0.484 | 8.56 | -0.471 | 0.379 | -0.662 | -- | -- | 0.448 | 23.5 | 22.22 | 937 | -- | -- |
| 102.22 | 0.471 | 8.63 | -1.1 | -- | -0.681 | -- | -2.22 | 0.275 | -- | 21.8 | 940 | -- | -- |
| 115.86 | 0.505 | 8.62 | -0.747 | 0.235 | -- | -1.66 | -- | 0.226 | 22.3 | -- | -- | -- | -- |
| 126.68 | 0.527 | 8.61 | -0.684 | 0.252 | -- | -- | -- | 0.228 | 23.7 | -- | -- | -- | -- |
| 113.46 | 0.496 | 8.55 | -0.424 | -- | -0.695 | -- | -- | 0.464 | -- | 22.1 | 1498 | -- | -- |
| 111.45 | 0.492 | 8.57 | -- | 0.322 | -0.837 | -- | -- | 0.474 | 23.4 | 21.73 | 2355 | -- | -- |
| 130.69 | 0.534 | 8.61 | -0.677 | -- | -- | -- | -- | 0.231 | -- | -- | -- | -- | -- |
| 139.01 | 0.552 | 8.6 | -- | 0.245 | -- | -- | -- | 0.304 | 23.5 | -- | -- | -- | -- |
| 116.62 | 0.503 | 8.54 | -- | -- | -0.851 | -- | -- | 0.525 | -- | 21.8 | 1546 | -- | -- |
| 142.77 | 0.558 | 8.59 | -- | -- | -- | -- | -- | 0.306 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 91.17 | temperature | 25 | 4320 | < th | dose independent | rect. | 21 | 6 |
| 4 | 91.44 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 2 |
| 9 | 91.66 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 2 |
| 17 | 92.10 | temperature | 25 | 4320 | > th | dose independent | rect. | 21 | 5 |
| 20 | 92.22 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 22 |
| 37 | 93.05 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 39 | 93.10 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 21 |
| 46 | 93.17 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 14 |
| 51 | 93.26 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 4 |
| 54 | 93.29 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 68 | 93.47 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 16 |
| 69 | 93.48 | temperature | 25 | 1440 | < th | dose dependent | rect. | 20 | 2 |
| 75 | 93.54 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 21 |
| 88 | 93.63 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 11 |
| 102 | 93.70 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 107 | 93.74 | temperature | 20 | 270 | > th | dose dependent | sin | 5 | NA |
| 108 | 93.74 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 112 | 93.75 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 133 | 93.84 | temperature | 20 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 134 | 93.84 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 14 |
| 138 | 93.86 | temperature | 25 | 720 | < th | dose dependent | rect. | 19 | 23 |
| 157 | 93.95 | temperature | 25 | 720 | < th | dose dependent | rect. | 8 | 23 |
| 179 | 94.06 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 9 |
| 185 | 94.08 | temperature | 10 | 720 | > th | dose dependent | sin | 7 | NA |
| 186 | 94.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 288 | 94.39 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 299 | 94.42 | temperature | 30 | 720 | < th | dose dependent | sin | 7 | NA |
| 614 | 95.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 8 |
| 663 | 95.19 | temperature | 10 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 680 | 95.24 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 6 |
| 715 | 95.32 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 1 |
| 897 | 95.68 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 2 |
| 940 | 95.76 | wind | 9 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 984 | 95.83 | temperature | 10 | 10 | > th | dose dependent | rect. | 21 | 23 |