BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0314500 Os03g0314500|AK102644
(730 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0314500 TolB, C-terminal domain containing protein 1493 0.0
Os03g0403400 TolB, C-terminal domain containing protein 978 0.0
Os12g0431300 TolB, C-terminal domain containing protein 758 0.0
Os03g0840200 TolB, C-terminal domain containing protein 346 3e-95
Os07g0638100 TolB, C-terminal domain containing protein 254 1e-67
Os04g0278101 TolB, C-terminal domain containing protein 140 3e-33
>Os03g0314500 TolB, C-terminal domain containing protein
Length = 730
Score = 1493 bits (3865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 720/730 (98%), Positives = 720/730 (98%)
Query: 1 MGESRGSIAFFASYRPPVALDIFCCPAPPSSPKDELHLTDGDSYNYNCQPIPPAALKTVV 60
MGESRGSIAFFASYRPPVALDIFCCPAPPSSPKDELHLTDGDSYNYNCQPIPPAALKTVV
Sbjct: 1 MGESRGSIAFFASYRPPVALDIFCCPAPPSSPKDELHLTDGDSYNYNCQPIPPAALKTVV 60
Query: 61 ERLGVSRGDAVEGDIDSGRITGLVFVSEREHNLETLHIALRFNDDGEVQVFSLADAYGGD 120
ERLGVSRGDAVEGDIDSGRITGLVFVSEREHNLETLHIALRFNDDGEVQVFSLADAYGGD
Sbjct: 61 ERLGVSRGDAVEGDIDSGRITGLVFVSEREHNLETLHIALRFNDDGEVQVFSLADAYGGD 120
Query: 121 GLFSGARMEDSGCIAGGYEVDGRTVDHYLVYVSTKEPVRERRSPWNVAYKTNLRTGETER 180
GLFSGARMEDSGCIAGGYEVDGRTVDHYLVYVSTKEPVRERRSPWNVAYKTNLRTGETER
Sbjct: 121 GLFSGARMEDSGCIAGGYEVDGRTVDHYLVYVSTKEPVRERRSPWNVAYKTNLRTGETER 180
Query: 181 LTPPGTFDISPSVSPSGKKVAVASYQGKKWDGEIKNLNTNIYVMSLENPSQDRERVIENG 240
LTPPGTFDISPSVSPSGKKVAVASYQGKKWDGEIKNLNTNIYVMSLENPSQDRERVIENG
Sbjct: 181 LTPPGTFDISPSVSPSGKKVAVASYQGKKWDGEIKNLNTNIYVMSLENPSQDRERVIENG 240
Query: 241 GWPSWGSEDVIFFHRKDGDGENSCWGVFRHTLSTGETVRVTPAAFDSVTPAAIDETRVAV 300
GWPSWGSEDVIFFHRKDGDGENSCWGVFRHTLSTGETVRVTPAAFDSVTPAAIDETRVAV
Sbjct: 241 GWPSWGSEDVIFFHRKDGDGENSCWGVFRHTLSTGETVRVTPAAFDSVTPAAIDETRVAV 300
Query: 301 AAIRQKSEFSDVRVEAQYRHIEVFDMRSPEQPMQITRNTRPKADHFNPFVMDGGKFIGYH 360
AAIRQKSEFSDVRVEAQYRHIEVFDMRSPEQPMQITRNTRPKADHFNPFVMDGGKFIGYH
Sbjct: 301 AAIRQKSEFSDVRVEAQYRHIEVFDMRSPEQPMQITRNTRPKADHFNPFVMDGGKFIGYH 360
Query: 361 RCKSELLQHGDDLPRKFHKLQSPHEDVGVFRVSGVFPTFSKDGSQLAFVDNEFKSVWLAD 420
RCKSELLQHGDDLPRKFHKLQSPHEDVGVFRVSGVFPTFSKDGSQLAFVDNEFKSVWLAD
Sbjct: 361 RCKSELLQHGDDLPRKFHKLQSPHEDVGVFRVSGVFPTFSKDGSQLAFVDNEFKSVWLAD 420
Query: 421 SQGMRVVFKTDGPDSVFSPLWNSKKDILYVCMGPSFKASETLEIHSIHNVSTGDRKSRQL 480
SQGMRVVFKTDGPDSVFSPLWNSKKDILYVCMGPSFKASETLEIHSIHNVSTGDRKSRQL
Sbjct: 421 SQGMRVVFKTDGPDSVFSPLWNSKKDILYVCMGPSFKASETLEIHSIHNVSTGDRKSRQL 480
Query: 481 TFGGFNNAFPSTNPDGTKFVFRSTRDGGAKYSKNLYIMEDADAGEGEDGSQSTVTRMTAG 540
TFGGFNNAFPSTNPDGTKFVFRSTRDGGAKYSKNLYIMEDADAGEGEDGSQSTVTRMTAG
Sbjct: 481 TFGGFNNAFPSTNPDGTKFVFRSTRDGGAKYSKNLYIMEDADAGEGEDGSQSTVTRMTAG 540
Query: 541 EWTDTHCQWSPNGKWIVFSSNRDRPADAPERDHGLDPGYFAVYLMDVAXXXXXXXXXXGY 600
EWTDTHCQWSPNGKWIVFSSNRDRPADAPERDHGLDPGYFAVYLMDVA GY
Sbjct: 541 EWTDTHCQWSPNGKWIVFSSNRDRPADAPERDHGLDPGYFAVYLMDVASRSVVRVIRSGY 600
Query: 601 DVAGHVNHPVFSPDGRSIAVTSDLAAVTADPMSLPLFLHSVRPYGDIFTVDIDPDDMARN 660
DVAGHVNHPVFSPDGRSIAVTSDLAAVTADPMSLPLFLHSVRPYGDIFTVDIDPDDMARN
Sbjct: 601 DVAGHVNHPVFSPDGRSIAVTSDLAAVTADPMSLPLFLHSVRPYGDIFTVDIDPDDMARN 660
Query: 661 EDVEGFVRVTHSRYENSTPAWTVFSTHDPHAQWNLLVVEDEHVPSCPYAHPDGGESWHMT 720
EDVEGFVRVTHSRYENSTPAWTVFSTHDPHAQWNLLVVEDEHVPSCPYAHPDGGESWHMT
Sbjct: 661 EDVEGFVRVTHSRYENSTPAWTVFSTHDPHAQWNLLVVEDEHVPSCPYAHPDGGESWHMT 720
Query: 721 GQICIPKRHC 730
GQICIPKRHC
Sbjct: 721 GQICIPKRHC 730
>Os03g0403400 TolB, C-terminal domain containing protein
Length = 744
Score = 978 bits (2527), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/750 (65%), Positives = 582/750 (77%), Gaps = 29/750 (3%)
Query: 2 GESRGSIAFFASYRPPVALDIFCCPA--PPSSPKDELHLTDGDSYNYNCQPIPPAALKTV 59
GESRGSIAFFA+YRPPV LD+F CP PPSSP+DELHLTDG SYN++C+PIP AAL+ +
Sbjct: 3 GESRGSIAFFATYRPPVPLDVFSCPVAPPPSSPRDELHLTDGVSYNHSCRPIPAAALRAL 62
Query: 60 VERLGVSRGDAVEGDIDSGRITGLVFVSEREHNLETLHIALRFNDDGEVQVFSLADAYGG 119
++R ++ +A D+D+GRITGLVFVSER+ LETLH+ALRF+ +V+VF LAD +G
Sbjct: 63 LQRPKLA-SEATTADVDAGRITGLVFVSERDSGLETLHVALRFDGGKQVKVFGLADIFGA 121
Query: 120 DGLFSGARMEDSGCIAGGYEVDGRTVDHYLVYVSTKEPVRERRSPWNVAYKTNLRTGETE 179
G FSG RMEDSGC GGY GR VDH LVYVST+EPV RRSPW V Y TNLRTGET
Sbjct: 122 GGDFSGVRMEDSGCFGGGYRERGRAVDHTLVYVSTREPVAARRSPWTVVYGTNLRTGETA 181
Query: 180 RLTPPGTFDISPSVSPSGKKVAVASYQGKK--WDGEIKNLNTNIYVMSLENPSQDRER-V 236
RLTP GTFD+SP+VSPSGK+VAVAS+QGK WDGEI++L T+IYVM++ P R V
Sbjct: 182 RLTPRGTFDLSPAVSPSGKRVAVASWQGKPGLWDGEIEDLRTDIYVMNVHKPPLGRTGPV 241
Query: 237 IENGGWPSWGSEDVIFFHRKDGDGENSCWGVFRHTLSTGETVRVTPAAFDSVTPAAIDET 296
++N GWP+WGS+DVIFFHR+ G + WGVFR ++STGE RVTP FD+VTPAAI ET
Sbjct: 242 VKNAGWPTWGSDDVIFFHRRVG----TTWGVFRFSMSTGEEARVTPEEFDAVTPAAISET 297
Query: 297 RVAVAAIRQKSEFSDVRVEAQYRHIEVFDMRSPEQPMQITRNTRPKADHFNPFVMDGGKF 356
+VAVA IR+KS+FSDVRVE QYRHIE+FD+ SPEQP++IT+ TRPK DHFNPFV+DGG
Sbjct: 298 KVAVATIRRKSQFSDVRVEEQYRHIEIFDVASPEQPVKITQKTRPKTDHFNPFVLDGGSR 357
Query: 357 IGYHRCKSELLQH-----GDDLPRKFHKLQSPHEDVGVFRVSGVFPTFSKDGSQLAFVDN 411
IGYHRCKSE L G + FHKLQSPH+DVG+FRVSGV PT SKDGS+LAFVDN
Sbjct: 358 IGYHRCKSEQLHQNNGGGGSSVANNFHKLQSPHKDVGLFRVSGVCPTISKDGSKLAFVDN 417
Query: 412 EFKSVWLADSQGMRVVFKTDGPDSVFSPLWNSKK--DILYVCMGPSFKASETLEIHSIHN 469
EFK+VWLADS G+RVV++ GP+SVFS WN D LYVC+GPSF A + L+I++IH+
Sbjct: 418 EFKAVWLADSHGLRVVYEKKGPNSVFSTAWNQNTALDTLYVCVGPSFSADKPLQIYAIHD 477
Query: 470 VST-GDRKSRQLTFGGFNNAFPSTNPDGTKFVFRSTRDGGAKYS--KNLYIMEDADAGEG 526
VS G R+ R+LT G NNAFPS++PDG + VFRSTRDGG KNLY+MEDA GE
Sbjct: 478 VSALGGRQQRRLTAGASNNAFPSSSPDGGRLVFRSTRDGGGGGRRHKNLYVMEDAAVGE- 536
Query: 527 EDGSQSTVTRMTAGEWTDTHCQWSPN--GKWIVFSSNRDRPADAPERDHGLDPGYFAVYL 584
S VTR+T+G WTDTHC WSP WIVFSS RD+PA AP D+GLDPGYFAV+L
Sbjct: 537 --FGTSKVTRLTSGAWTDTHCSWSPREGSDWIVFSSTRDKPAAAPADDNGLDPGYFAVFL 594
Query: 585 MDVAXXXXXXXXXXGYD-VAGHVNHPVFSPDGRSIAVTSDLAAVTADPMSLPLFLHSVRP 643
+ + D VAGHVNHPVFSPDGRSIAVT+DLAAV+ADP+SLPLFLHSVRP
Sbjct: 595 VRASDPTVVVRVVRSADSVAGHVNHPVFSPDGRSIAVTADLAAVSADPISLPLFLHSVRP 654
Query: 644 YGDIFTVDIDPDDMARNEDVEGFVRVTHSRYENSTPAWTVFSTHDPHAQWNLLVVEDE-- 701
YGDIFTVDIDPDD+++N DV F RVTHSRYENSTPAWT F+T DP+AQW+ LV E
Sbjct: 655 YGDIFTVDIDPDDISKNRDVRAFHRVTHSRYENSTPAWTTFATDDPNAQWSTLVTTKEAA 714
Query: 702 -HVPSCPYAHPDGGESWHMTGQICIPKRHC 730
+ P+CPYAHPDGG+SWHMTG + +PKR C
Sbjct: 715 AYRPACPYAHPDGGDSWHMTGHLLLPKRCC 744
>Os12g0431300 TolB, C-terminal domain containing protein
Length = 777
Score = 758 bits (1958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/786 (52%), Positives = 528/786 (67%), Gaps = 65/786 (8%)
Query: 1 MGESRGSIAFFASYRPPVALDIFCCPA--PPSSPKDELHLTDGDSYNYNCQPIPPAALKT 58
MG+SRGSIAFF +YRPPV LDIF CPA PP S KDEL LTDG+SYN N QPIP AALK
Sbjct: 1 MGKSRGSIAFFGTYRPPVPLDIFSCPANPPPQSAKDELLLTDGESYNQNGQPIPAAALKE 60
Query: 59 VVERLG------VSRGDAVEGDIDSGRITGLVFVSEREHNLETLHIALRFNDDG-EVQVF 111
++ LG S A D + GR+TGLVFVSER+ LETLH+ALRF G +V+V
Sbjct: 61 LLTFLGKKNPKLASECGATPEDAEKGRVTGLVFVSERDRGLETLHVALRFVAGGKQVKVL 120
Query: 112 SLADAYGGDGLFSGARMEDSGCIAGGYEVDGRTVDHYLVYVSTKEPVRERRSPWNVAYKT 171
SL + YG D F G RMEDSGC+AGG++V TV H LVYVSTK PV+ RR+PW V Y+T
Sbjct: 121 SLGNIYGAD-TFGGVRMEDSGCVAGGFKVGRTTVGHSLVYVSTKAPVKARRTPWTVVYRT 179
Query: 172 NLRTGETERLTPPGTFDISPSVSPSGKKVAVASYQGKKWDGEIKNLNTNIYVMSLENPSQ 231
+L G+TERLTP G +D+SP+VSPSGK VAVA++Q +W+GEI+NL T+I VM+++ +Q
Sbjct: 180 DLADGKTERLTPLGQYDLSPAVSPSGKMVAVANFQQNRWNGEIENLKTDIVVMNVDKRAQ 239
Query: 232 ---DRERVIENGGWPSWGSEDVIFFHR---KDGDGENSCWGVFRHTLSTGETVRVTPAAF 285
DR+ +I++GGWP+WGS++VIFFHR + WGVFR ++ G+ RVT +
Sbjct: 240 GRSDRKVLIKDGGWPTWGSDNVIFFHRGFDTTPPSNTARWGVFRFDIAAGKEERVTDESI 299
Query: 286 DSVTPAAIDETRVAVAAIRQKSEFSDVRVE---AQYRHIEVFDMRSPEQPMQITRNTRPK 342
D++TPAAI ET+VAVA +R+KS+ ++VE QYRHIE+FD S + + IT+ TRP+
Sbjct: 300 DAMTPAAISETQVAVATVREKSKQVLMKVERVVTQYRHIEIFDTAS-KTSVPITQKTRPE 358
Query: 343 ADHFNPFVMDGGKFIGYHRCKSELL---QHGDDLP-----RKFHKLQSP--HEDVGVFRV 392
DH+NPFV+DGG +GYHRC+++ L Q+ P R+F K+Q P H DVG+FRV
Sbjct: 359 GDHYNPFVLDGGTRVGYHRCRTDKLLKVQNQKSTPTTSIQRRFDKVQPPESHADVGLFRV 418
Query: 393 SGVFPTFSKDGSQLAFVDNEFKSVWLADSQGMRVVFKTDGPDSVFSPLWNSKKDI--LYV 450
+GVFP+ SK+G +LAFVDNEFK+VWLAD +G+RVV+K SVFS WN D+ LYV
Sbjct: 419 TGVFPSVSKNGKKLAFVDNEFKAVWLADGRGLRVVYKVRATKSVFSTSWNQNDDLDTLYV 478
Query: 451 CMGPSFKASETLEIHSIHNVSTGDRKSRQ---LTFGGFNNAFPSTNPDGTKFVFRSTRD- 506
C GP+F + ++I I NVS D ++ + LT +N AFPSTN +GTK VFRS+R+
Sbjct: 479 CEGPAFSIDKPVQIMRIPNVSREDYENMETFPLTDEEYNCAFPSTNAEGTKLVFRSSRNR 538
Query: 507 --GGAKYSKNLYIMEDADAGEGEDGSQSTVTRMTAGEWTDTHCQWSPN--GKWIVFSSNR 562
GG + KNLYI+ + E G + V +T G WTDTHC WSP WIVFSS
Sbjct: 539 VAGGERQHKNLYII------DAEKGEAAGVVPLTDGPWTDTHCSWSPREGCDWIVFSST- 591
Query: 563 DRP-------ADAPERDHGLDPGYFAVYLMDVAXXXX------XXXXXXGYDVAGHVNHP 609
RP D PE+DHGLDPGYFAVYL++ +AGH+NHP
Sbjct: 592 GRPEKDIVKGKDEPEKDHGLDPGYFAVYLVNAKDIKKGEVPVPVRVIHSAPTIAGHINHP 651
Query: 610 VFSPDGRSIAVTSDLAAVTADPMSLPLFLHSVRPYGDIFTVDI-DPDDMARNEDVEGFVR 668
VFSPD +SI +DLAAV+ADP+S+P F HSVRPYGDIF+V++ D DMA+N D++ F R
Sbjct: 652 VFSPDMKSIVFAADLAAVSADPISMPHFTHSVRPYGDIFSVNLRDTTDMAKNRDIQEFHR 711
Query: 669 VTHSRYENSTPAWTVFS--THDPHAQWNLLVVEDEHVPSCPYAHPDGGES--WHMTGQIC 724
+THSRYE STP WT + DP+A+W +L P CPYA + GE WHMTG +
Sbjct: 712 ITHSRYEYSTPTWTGIADDEEDPNAKWKMLESLPNFTPWCPYARGEAGEKEGWHMTGHLT 771
Query: 725 IPKRHC 730
I KR C
Sbjct: 772 IQKRCC 777
>Os03g0840200 TolB, C-terminal domain containing protein
Length = 688
Score = 346 bits (888), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 227/557 (40%), Positives = 304/557 (54%), Gaps = 77/557 (13%)
Query: 149 LVYVSTKEPVRERRSPWNVAYKTNLRTGETERLTPPGTFDISPSVSPSGKKVAVASYQGK 208
LVYVST P E RS W Y T L TG T RLTP G D SP+VSPSG+ A AS
Sbjct: 146 LVYVSTAVPAAEPRSSWAAVYSTELSTGRTRRLTPLGVADFSPAVSPSGEWTAAASPGAA 205
Query: 209 KWDGEIKNLNTNIYVMSLENPSQDRERVIENGGWPSWGSEDVIFFHRKDGDGENSCWGVF 268
W GE+++L T+IYV + S+ R I +GGWPSW E +FFHR+D DG +GV+
Sbjct: 206 GWSGEVEDLRTDIYVFRTADGSR-RSLAIRDGGWPSWADETTVFFHRRDSDG---WYGVY 261
Query: 269 RHTLS-TGETV------RVTPAAFDSVTPAAIDET--RVAVAAIRQKSEFSDVRVEAQYR 319
R +S TG+ V R+TP F + TPAA VAVA R S+ YR
Sbjct: 262 RAEISVTGDGVEAASVERITPPGFHAFTPAASPGAPGLVAVATRRAGSD---------YR 312
Query: 320 HIEVFDMRSPEQP--MQITRNTRPKADHFNPFVMDGGKFIGYHRCKSELLQHGDDLPRKF 377
HIEV D+ S + ++TR P+ HFNPF+ G +GYHRC+ + D P
Sbjct: 313 HIEVIDVSSDGKNAYFEVTRPVAPRVHHFNPFISPDGARVGYHRCRG---RGNGDSPLLL 369
Query: 378 HKLQSPH--EDVGVFRVSGVFPTFSKDGSQLAFVDNEFKSVWLAD-SQGMRVVFKTDGPD 434
++SP + +FR+ G FP+FS DG ++AFV V +D S G R +F +
Sbjct: 370 ENIKSPGSPDTFSLFRIDGSFPSFSHDGKKIAFVGLPGMYVVNSDGSGGRRKIFSGN--- 426
Query: 435 SVFSPLWNSK-KDILYVCMGPSFKASETLEIHSIHNVSTGDR------KSRQLTFGGFNN 487
FS W+ K K ++Y +GP F ASET E+ + +S GD ++LT GG NN
Sbjct: 427 -AFSTSWDWKRKGVVYTSIGPDF-ASETTEVDVVA-ISLGDDDDESTISMKKLTVGGENN 483
Query: 488 AFPSTNPDGTKFVFRSTRDGGAKYSKNLYIMEDADAGEGEDGSQSTVTRMTAGEWTDTHC 547
AFPS +PDG VFRS R G +KNLYI+ + EDG + R+T G W+DT C
Sbjct: 484 AFPSPSPDGKWVVFRSGRSG----NKNLYII------DAEDGEAGGIRRLTEGPWSDTMC 533
Query: 548 QWSPNGKWIVFSSNRDRPADAPERDHGLDPGYFAVYLMDVAXXXXXXXXXXGYDVAGHVN 607
WSP+G+WI F+S+R P G FA+Y++ G +G N
Sbjct: 534 NWSPDGEWIAFASDRHAPGS----------GSFAIYMVHPNGTGLRRVVHSG--GSGRTN 581
Query: 608 HPVFSPDGRSIAVTSDLAAVTADPMSLPLFLHSVRPYGDIFTVDIDPDDMARNEDVEGFV 667
HP FSPD +S+ TSD AAV+A+P+S P H +PYG+IFTVDID ++
Sbjct: 582 HPWFSPDSKSLVFTSDYAAVSAEPVSNP---HHYQPYGEIFTVDIDGSNIR--------- 629
Query: 668 RVTHSRYENSTPAWTVF 684
R+TH+ +E+ TP+WT +
Sbjct: 630 RLTHNSFEDGTPSWTPY 646
>Os07g0638100 TolB, C-terminal domain containing protein
Length = 659
Score = 254 bits (650), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 205/629 (32%), Positives = 299/629 (47%), Gaps = 75/629 (11%)
Query: 87 SEREH-NLETLHIALRFNDDGEVQVFSLADAYGGDGLFSG-----ARMEDSGCIAGGYEV 140
+ER H + +++ +F DDG +V +++ G GLF R E + G
Sbjct: 35 AERRHTDGVSVNFNAQFVDDGGEEVAFVSERGGAAGLFRCRPGPEQRAEPLPTVEGSLFH 94
Query: 141 DGRTV-DHYLVYVSTKEPVRERRSPWNVAYKTNLRTGETERLTPPGTFDISPSVSPSGKK 199
D TV L +VS E W Y T + + ET R++PPG D+SP+VS SG+
Sbjct: 95 DRPTVRGGRLYFVSAHEQPPAPFRSWAAVYATEIGSKETVRVSPPGVVDMSPAVSDSGEL 154
Query: 200 VAVASYQGKKWDGEIKNLNTNIYVMSLENPSQDRERVIENGGWPSWGSEDVIFFHRKDGD 259
VAVASY + W + + L T + V +P++ V GWP+W E +FFHR D
Sbjct: 155 VAVASYGDRPWAFDFRVLETEVAVFRAADPARRVVVVGRG-GWPTWHGEGTVFFHRVADD 213
Query: 260 GENSCWGVFRHTLS------TGETVRVTPAAFDSVTPAAIDETR----VAVAAIRQKSEF 309
G W VFR +S TG RVTP TPAA+ +AVA R+
Sbjct: 214 G---WWSVFRVDVSPETLEPTGGERRVTPPGLHCFTPAAVGRGGGGRWIAVATRRKG--- 267
Query: 310 SDVRVEAQYRHIEVFDMRSPEQPMQITRNTRPKADHFNPFVMDGGKFIGYHRCKSELLQH 369
AQ RH+E+FD+ + E +T P+ H+NPF G +GYHR + +
Sbjct: 268 -----RAQ-RHVELFDLET-ESFSPLTERLNPELHHYNPFFSPSGDRVGYHRFRGAGAR- 319
Query: 370 GDDLPRKFHKLQSPHEDVGVFRVSGVFPTFSKDGSQLAFVDNEFKS--VWLADSQGMRVV 427
GD + +QSP + + RV G FP+FS D + LA + FK+ V + S G +
Sbjct: 320 GDSVVPYLQPVQSPVSSLRMLRVYGTFPSFSPDAAHLAMNGDFFKTPGVTILRSDGAKRW 379
Query: 428 FKTDGPDSVFSPLWNSKKDILYVCMGPSFKASE-TLEIHSIH----NVSTG-DRKSRQLT 481
T P+ ++ ++ +++ MGP F+ ++ T+ I + ++TG D + L
Sbjct: 380 VLTREPNLFYTSWSPAESGVIFTSMGPIFETTKATVRIARLEFDAGELTTGRDEVAATLK 439
Query: 482 F----GGFNNAFPSTNPDGTKFVFRSTRDGGAKYSKNLYIMEDADAGEGEDGSQSTVTRM 537
N+AFP+ +P G VFRS R G KNLYI+ DA GE + T+ R+
Sbjct: 440 VLTRPEAGNDAFPAVSPCGKWVVFRSGRSG----HKNLYIV-DAAHGEDVGAGEGTIRRL 494
Query: 538 TAGEWTDTHCQWSPNGKWIVFSSNRDRPADAPERDHGLDPGYFAVYLMDVAXXXXXXXXX 597
T GEW DT WSP+G I FSSNR P +A F++YL+
Sbjct: 495 TDGEWIDTMPSWSPDGSLIAFSSNRHDPTNA---------AVFSIYLVRPDGSGLRRVHV 545
Query: 598 XGYDVAG-----HVNHPVFSPDGRSIAVTSDLAAVTADPMSLPLFLHSVRPYGDIFTVDI 652
G + +NH FSPD R + T++ V A+P+S P + +PYGD++ +
Sbjct: 546 AGPAGSAAADRERINHVCFSPDSRWLLFTANFGGVMAEPISAP---NQFQPYGDLYVCRL 602
Query: 653 DPDDMARNEDVEGFVRVTHSRYENSTPAW 681
D G VR+T + YEN TPAW
Sbjct: 603 DGS---------GLVRLTCNAYENGTPAW 622
>Os04g0278101 TolB, C-terminal domain containing protein
Length = 378
Score = 140 bits (353), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/416 (29%), Positives = 181/416 (43%), Gaps = 111/416 (26%)
Query: 279 RVTPAAFDSVTPAAIDETRVAVAAIRQKSEFSDVRVEAQYRHIEVFDMRSPEQP-MQITR 337
R+TP F + TPAA + A+ + SD YRHIEV DM + ++TR
Sbjct: 23 RITPRGFHAFTPAA-SPGAPGLVAVATRLAGSD------YRHIEVIDMSDDKNAYFEVTR 75
Query: 338 NTRPKADHFNPFVMDGGKFIGYHRCKSELLQHGDDLPRKFHKLQS--PHEDVGVFRVSGV 395
P+ FNPF+ G +GYHRC + D P ++S P + +FR+ G
Sbjct: 76 PVAPRVHRFNPFISLDGARVGYHRCWG---RGNGDSPLLLENIKSPVPADTFSLFRIDGS 132
Query: 396 FPTFSKDGSQLAFVDNEFKSVWLADSQGMR-VVFKTDGPDSVFSPLWNSKKDILYVCMGP 454
FP + + S G R + + PD V L ++DI + +GP
Sbjct: 133 FPPSRTTARR-------------SRSSGCRGYLLRERLPDVVG--LEEERRDI-HTSIGP 176
Query: 455 SFKASETLEIHSIHNVSTGDRKS-----RQLTFGGFNNAFPSTNPDGTKFVFRSTRDGGA 509
F A E+ E+ + +S GD ++LT G NNAFPS PDG
Sbjct: 177 DF-AIESTEVDVV-AISLGDDDDKTISMKKLTVGDENNAFPSPPPDGKWL---------- 224
Query: 510 KYSKNLYIMEDADAGEGEDGSQSTVTRMTAGEWTDTHCQWSPNGKWIVFSSNRDRPADAP 569
DG + R+T G W+DT C WSP+ +WI F+S+R P
Sbjct: 225 ------------------DGEAGGIRRLTEGPWSDTMCNWSPDDEWIAFASDRHAPGS-- 264
Query: 570 ERDHGLDPGYFAVYLMDVAXXXXXXXXXXGYDVAGHVNHPVFS-PDGRSIAVTSDLAAVT 628
G FA+ + HP + D +S+ TSD AAV+
Sbjct: 265 --------GSFAIMV-----------------------HPNGTGSDSKSLVFTSDYAAVS 293
Query: 629 ADPMSLPLFLHSVRPYGDIFTVDIDPDDMARNEDVEGFVRVTHSRYENSTPAWTVF 684
A+P+S P H +PYG+I+TVDID ++ R+TH+ +E+ TP+WT +
Sbjct: 294 AEPVSNP---HHYQPYGEIYTVDIDGSNIR---------RLTHNSFEDGTPSWTPY 337
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.135 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 29,567,199
Number of extensions: 1431518
Number of successful extensions: 3044
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 2970
Number of HSP's successfully gapped: 7
Length of query: 730
Length of database: 17,035,801
Length adjustment: 108
Effective length of query: 622
Effective length of database: 11,396,689
Effective search space: 7088740558
Effective search space used: 7088740558
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 160 (66.2 bits)