Os12g0431300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : TolB, C-terminal domain containing protein.
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Os12g0431300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : TolB, C-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 62.44 | 0.368 | 2.99 | 0.00737 | 0.0356 | -0.274 | -0.379 | -0.285 | 0.12 | 0.306 | 1010 | 10 | -- | -- |
| 62.68 | 0.372 | 2.99 | 0.0253 | 0.028 | -0.265 | -0.419 | -- | 0.123 | 23.8 | 1010 | 7 | -- | -- |
| 62.88 | 0.372 | 2.99 | 0.0156 | 0.0674 | -0.269 | -- | -0.349 | 0.119 | 4.06 | 1010 | 10 | -- | -- |
| 63.27 | 0.373 | 2.99 | 0.0401 | 0.065 | -0.258 | -- | -- | 0.123 | 4.08 | 1010 | 10 | -- | -- |
| 63.12 | 0.372 | 2.99 | 0.019 | -- | -0.272 | -- | -0.341 | 0.121 | -- | 1010 | 9 | -- | -- |
| 64.8 | 0.377 | 2.99 | 0.0142 | 0.0011 | -- | -0.427 | -- | 0.124 | 23.5 | -- | -- | -- | -- |
| 65.27 | 0.378 | 2.99 | 0.0289 | 0.0786 | -- | -- | -- | 0.123 | 5.4 | -- | -- | -- | -- |
| 63.5 | 0.373 | 2.99 | 0.0428 | -- | -0.261 | -- | -- | 0.125 | -- | 1010 | 9 | -- | -- |
| 63.31 | 0.373 | 2.99 | -- | 0.0659 | -0.257 | -- | -- | 0.119 | 4.08 | 1010 | 10 | -- | -- |
| 65.59 | 0.378 | 2.99 | 0.0316 | -- | -- | -- | -- | 0.125 | -- | -- | -- | -- | -- |
| 65.29 | 0.378 | 2.99 | -- | 0.0791 | -- | -- | -- | 0.12 | 5.39 | -- | -- | -- | -- |
| 63.55 | 0.372 | 2.99 | -- | -- | -0.26 | -- | -- | 0.12 | -- | 1010 | 9 | -- | -- |
| 65.62 | 0.378 | 2.99 | -- | -- | -- | -- | -- | 0.122 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 60.69 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 2 | 60.78 | wind | 5.0 | 10 | > th | dose dependent | rect. | 11 | 1 |
| 4 | 60.87 | wind | 7.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 7 | 60.89 | wind | 5.0 | 720 | > th | dose independent | rect. | 4 | 2 |
| 8 | 60.89 | wind | 5.0 | 720 | > th | dose dependent | rect. | 5 | 1 |
| 16 | 60.93 | wind | 7.0 | 90 | > th | dose independent | rect. | 10 | 1 |
| 40 | 61.06 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 42 | 61.06 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 15 | 1 |
| 43 | 61.06 | temperature | 25.0 | 720 | > th | dose dependent | rect. | 5 | 3 |
| 44 | 61.07 | wind | 7.0 | 10 | > th | dose independent | rect. | 11 | 1 |
| 64 | 61.15 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 66 | 61.15 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 15 | 1 |
| 78 | 61.21 | humidity | 80.0 | 90 | > th | dose dependent | rect. | 15 | 3 |
| 83 | 61.24 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 3 | 17 |
| 110 | 61.32 | radiation | 1.0 | 14400 | < th | dose dependent | rect. | 3 | 1 |
| 116 | 61.33 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 128 | 61.36 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 21 | 23 |
| 143 | 61.38 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 16 | 1 |
| 179 | 61.44 | temperature | 25.0 | 720 | > th | dose independent | rect. | 5 | 4 |
| 196 | 61.46 | humidity | 90.0 | 90 | > th | dose independent | rect. | 16 | 1 |
| 201 | 61.46 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 3 |
| 206 | 61.48 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 3 |
| 214 | 61.49 | wind | 9.0 | 90 | > th | dose independent | rect. | 18 | 17 |
| 221 | 61.50 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 19 |
| 223 | 61.51 | radiation | 20.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 224 | 61.51 | radiation | 20.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 255 | 61.55 | humidity | 80.0 | 90 | > th | dose independent | rect. | 15 | 6 |
| 260 | 61.56 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 264 | 61.57 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 267 | 61.57 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 270 | 61.58 | temperature | 20.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 274 | 61.58 | atmosphere | 995.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 282 | 61.59 | wind | 1.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 283 | 61.59 | wind | 5.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 286 | 61.59 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 288 | 61.59 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 289 | 61.59 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 292 | 61.59 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 294 | 61.59 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 296 | 61.59 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 301 | 61.59 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 304 | 61.59 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 305 | 61.59 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 307 | 61.59 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 312 | 61.59 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 314 | 61.60 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 317 | 61.60 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 321 | 61.60 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 327 | 61.60 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 328 | 61.60 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 350 | 61.60 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 356 | 61.60 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 368 | 61.61 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 369 | 61.61 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 375 | 61.61 | humidity | 80.0 | 10 | > th | dose dependent | rect. | 16 | 2 |
| 392 | 61.63 | wind | 9.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 393 | 61.63 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 396 | 61.63 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 400 | 61.63 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 409 | 61.63 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 410 | 61.63 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 432 | 61.63 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 4 | 23 |
| 435 | 61.63 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 436 | 61.63 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 3 | 1 |
| 499 | 61.68 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 504 | 61.69 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 510 | 61.70 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 513 | 61.70 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 3 | 12 |
| 525 | 61.72 | atmosphere | 1010.0 | 10 | < th | dose independent | sin | 1 | NA |
| 526 | 61.72 | temperature | 20.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 529 | 61.72 | wind | 3.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 535 | 61.73 | wind | 3.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 580 | 61.75 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 21 |
| 592 | 61.76 | temperature | 10.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 594 | 61.76 | temperature | 30.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 595 | 61.76 | humidity | 50.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 601 | 61.76 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 603 | 61.76 | radiation | 1.0 | 30 | < th | dose independent | rect. | 2 | 1 |
| 608 | 61.76 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 2 | 1 |
| 609 | 61.76 | temperature | 10.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 610 | 61.76 | wind | 7.0 | 90 | > th | dose dependent | sin | 5 | NA |
| 612 | 61.76 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 2 | 1 |
| 616 | 61.76 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 621 | 61.76 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 629 | 61.77 | temperature | 20.0 | 90 | < th | dose independent | rect. | 16 | 1 |
| 635 | 61.77 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 3 | 14 |
| 654 | 61.78 | humidity | 80.0 | 90 | > th | dose independent | rect. | 11 | 10 |
| 663 | 61.78 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 740 | 61.82 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 769 | 61.84 | wind | 7.0 | 10 | > th | dose dependent | sin | 4 | NA |
| 792 | 61.86 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 797 | 61.87 | wind | 9.0 | 90 | > th | dose independent | sin | 7 | NA |
| 798 | 61.87 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 818 | 61.88 | wind | 7.0 | 90 | > th | dose independent | sin | 5 | NA |
| 876 | 61.90 | wind | 7.0 | 10 | < th | dose independent | rect. | 3 | 23 |
| 916 | 61.93 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 3 | 23 |
| 923 | 61.93 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 945 | 61.95 | humidity | 80.0 | 30 | > th | dose independent | rect. | 2 | 17 |
| 960 | 61.96 | temperature | 25.0 | 90 | > th | dose independent | rect. | 5 | 14 |
| 970 | 61.96 | temperature | 20.0 | 90 | < th | dose dependent | rect. | 12 | 6 |