BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0310400 Os03g0310400|AK068241
(268 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0310400 Enoyl-CoA hydratase/isomerase domain containin... 493 e-140
Os02g0654100 Similar to Enoyl-CoA hydratase 86 3e-17
Os01g0662700 Similar to Naphthoate synthase (EC 4.1.3.36) 86 4e-17
Os01g0925200 Similar to Enoyl CoA hydratase-like protein 78 6e-15
Os05g0155000 Similar to Protein MFP-b 66 3e-11
Os01g0348600 Similar to MFP2 (Fatty acid multifunctional pr... 65 8e-11
>Os03g0310400 Enoyl-CoA hydratase/isomerase domain containing protein
Length = 268
Score = 493 bits (1269), Expect = e-140, Method: Compositional matrix adjust.
Identities = 243/268 (90%), Positives = 243/268 (90%)
Query: 1 MAATSPDSGDLILVEPAKPGSRVAVVTINRPKALNALTRPMMVSXXXXXXXXXXXXXXXX 60
MAATSPDSGDLILVEPAKPGSRVAVVTINRPKALNALTRPMMVS
Sbjct: 1 MAATSPDSGDLILVEPAKPGSRVAVVTINRPKALNALTRPMMVSLAAAFRRLDADDGVAA 60
Query: 61 XXXXXXXXXFCSGVDLTAAEEVFKGDVKDPAADPVVQMERCRKPIVGAIAGFAVTAGFEI 120
FCSGVDLTAAEEVFKGDVKDPAADPVVQMERCRKPIVGAIAGFAVTAGFEI
Sbjct: 61 VVLAGRGRAFCSGVDLTAAEEVFKGDVKDPAADPVVQMERCRKPIVGAIAGFAVTAGFEI 120
Query: 121 ALACDILVAGRSAKFIDTHAKFGIFPSWGLSQKLSRVIGPNRAREVSLTCMPITAEMAEK 180
ALACDILVAGRSAKFIDTHAKFGIFPSWGLSQKLSRVIGPNRAREVSLTCMPITAEMAEK
Sbjct: 121 ALACDILVAGRSAKFIDTHAKFGIFPSWGLSQKLSRVIGPNRAREVSLTCMPITAEMAEK 180
Query: 181 WGLVNHIVDDTQVLSKAIEVCEAIARNNRNLVVLYKSVINDGLQLDLEHARALEKERAHD 240
WGLVNHIVDDTQVLSKAIEVCEAIARNNRNLVVLYKSVINDGLQLDLEHARALEKERAHD
Sbjct: 181 WGLVNHIVDDTQVLSKAIEVCEAIARNNRNLVVLYKSVINDGLQLDLEHARALEKERAHD 240
Query: 241 YYNGMTKEQFASMQKFIQGRSSKPPSKL 268
YYNGMTKEQFASMQKFIQGRSSKPPSKL
Sbjct: 241 YYNGMTKEQFASMQKFIQGRSSKPPSKL 268
>Os02g0654100 Similar to Enoyl-CoA hydratase
Length = 300
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 107/246 (43%), Gaps = 6/246 (2%)
Query: 19 PGSRVAVVTINRPKALNALTRPMMVSXXXXXXXXXXXXXXXXXXXXXXX-XXFCSGVDLT 77
P S + + + RP+A NA+ R M+ FC+G DL
Sbjct: 50 PDSGIVEMRLERPEARNAIGREMLQGLRSAIEKVKADATAKVVLLASSVPKVFCAGADLK 109
Query: 78 AAEEVFKGDVKD---PAADPVVQMERCRKPIVGAIAGFAVTAGFEIALACDILVAGRSAK 134
+ +V++ + E P + + G A G E+AL+CD+ + G +A
Sbjct: 110 ERRLMSPCEVREFVNSLRSTFLSFEALSIPTIAIVEGAAFGGGLELALSCDLRICGENAT 169
Query: 135 FIDTHAKFGIFPSWGLSQKLSRVIGPNRAREVSLTCMPITAEMAEKWGLVNHIVDDTQVL 194
F I P G +Q+L R++G +RA+E+ T A A G+VN+ V +
Sbjct: 170 FSLPETGLAIIPGAGGTQRLPRIVGKSRAKELIFTGRRFDAVEAVTMGVVNYCVPAGEAY 229
Query: 195 SKAIEVCEAIARNNRNLVVLYKSVINDGLQLDLEHARALEKERAHDYYNGMTKEQFASMQ 254
+A+E+ + I + + + K IN G+++DL A+E+E + T+++ +
Sbjct: 230 KRALELAQEINQKGPLAIRMAKKAINQGMEVDLSAGLAVEEECYEQVLH--TQDRLEGLA 287
Query: 255 KFIQGR 260
F + R
Sbjct: 288 AFAEKR 293
>Os01g0662700 Similar to Naphthoate synthase (EC 4.1.3.36)
Length = 331
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 96/207 (46%), Gaps = 7/207 (3%)
Query: 20 GSRVAVVTINRPKALNALTRPMMVSXXXXXXXXXXXXXXXXX--XXXXXXXXFCSGVD-- 75
G +A +TINRP NA RP+ V FCSG D
Sbjct: 78 GEGIAKITINRPDRRNAF-RPLTVKELMRAFEDARDDSSIGVIILTGKGTQSFCSGGDQA 136
Query: 76 LTAAEEVFKGDV--KDPAADPVVQMERCRKPIVGAIAGFAVTAGFEIALACDILVAGRSA 133
L A+ D + D VQ+ R KP++ +AG+AV G + + CD+ +A +A
Sbjct: 137 LRDADGYVDFDSFGRLNVLDLQVQIRRLPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNA 196
Query: 134 KFIDTHAKFGIFPSWGLSQKLSRVIGPNRAREVSLTCMPITAEMAEKWGLVNHIVDDTQV 193
F T K G F + + +SR++GP +ARE+ TA+ A++ GLVN +V +
Sbjct: 197 IFGQTGPKVGSFDAGYGTSIMSRLVGPKKAREMWFLSRFYTADEADRMGLVNVVVPLADL 256
Query: 194 LSKAIEVCEAIARNNRNLVVLYKSVIN 220
+ ++ C I RN+ + + KS +N
Sbjct: 257 ERETVKWCRKILRNSPTAIRVLKSALN 283
>Os01g0925200 Similar to Enoyl CoA hydratase-like protein
Length = 291
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 98/244 (40%), Gaps = 26/244 (10%)
Query: 1 MAATSPDSGDLILVEPAKPGSRVAVVTINRPKALNALTRPMMVSXXXXXXXXXXXXXXXX 60
+A T PD P + V V +NRP LNAL+
Sbjct: 23 LAVTRPD-----------PSAAVYEVRLNRPTRLNALSPDAFAEIPRAMALLDRAPAARA 71
Query: 61 XXXXXXXXXFCSGVDLTAAEEVFKGDVKDPA--------------ADPVVQMERCRKPIV 106
FC+G++L + DPA + +ERCRKP+V
Sbjct: 72 VVLSAAGPHFCAGIELGSPGSPATAPSGDPAPAAAEGLRRAILEMQAALTAIERCRKPVV 131
Query: 107 GAIAGFAVTAGFEIALACDILVAGRSAKFIDTHAKFGIFPSWGLSQKLSRVIGPNRAREV 166
A+ G V G E+ ACDI + A F+ I G Q+L R++G A ++
Sbjct: 132 AAVHGACVGGGVEVVAACDIRCCSKDATFVLREVDMAIVADLGALQRLPRIVGYGNAADL 191
Query: 167 SLTCMPITAEMAEKWGLVNHIVDDTQVLSKAI-EVCEAIARNNRNLVVLYKSVINDGLQL 225
+LT ITA A++ GLV + + Q L + ++ + I+ + V+ K+V+ +
Sbjct: 192 ALTGRKITAMEAKEMGLVTRVFNSKQELDAGVAKIAKEISEKSAWAVMGTKAVLLRSRDI 251
Query: 226 DLEH 229
+E
Sbjct: 252 TVEQ 255
>Os05g0155000 Similar to Protein MFP-b
Length = 724
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 89/198 (44%), Gaps = 8/198 (4%)
Query: 18 KPGSRVAVVTINRPKALNALTRPMMVSXXXXXXXXXXXXXXXXXXXXXXXXXFCSGVDLT 77
+PG VA++TI+ P +NAL+ ++ S F G+D+
Sbjct: 12 RPGG-VALITISNP-PVNALSIHVLYSLKDHYEEALRRNDVKAIVVTGKGGVFSGGLDIN 69
Query: 78 AAEEVFKGDVKDPAADPVV------QMERCRKPIVGAIAGFAVTAGFEIALACDILVAGR 131
+ + + D V +E KP V AI G A+ G EI++ C ++
Sbjct: 70 TFGAIQRNKAEQLKVDYVSIDVMTNTLEAAGKPSVAAINGPALGGGLEISMVCQARISIP 129
Query: 132 SAKFIDTHAKFGIFPSWGLSQKLSRVIGPNRAREVSLTCMPITAEMAEKWGLVNHIVDDT 191
+A+ + G+ P++G +Q+L R++G +A E+ L PI AE A + L++ IV
Sbjct: 130 TAQLGLPELQLGVIPAFGGTQRLPRLVGLTKALEMMLMSKPIKAEEAHQLALIDAIVSPN 189
Query: 192 QVLSKAIEVCEAIARNNR 209
+L+ A I+ + R
Sbjct: 190 DLLNTACRWALDISESRR 207
>Os01g0348600 Similar to MFP2 (Fatty acid multifunctional protein) (AtMFP2)
Length = 727
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 11/190 (5%)
Query: 23 VAVVTINRPKALNALTRPMMVSXXXXXXXXXXXXXXXXXXXXXXXXXFCSGVDLTAAEEV 82
VAV+TI P +N+L+ +++S F G D+++ V
Sbjct: 20 VAVITICNP-PVNSLSIDVLLSLKENYAEALRRNDVKAIVVTGKGGKFSGGFDISSFGSV 78
Query: 83 FKGDVKDPAADPVV------QMERCRKPIVGAIAGFAVTAGFEIALACDILVAGRSAKFI 136
G V+ P + +E KP V AI G A+ G E+A+AC ++ +A+
Sbjct: 79 QGGKVEQPKVGYISIDIITDTLEAATKPSVAAIDGLALGGGLEVAMACHARISTPTAQLG 138
Query: 137 DTHAKFGIFPSWGLSQKLSRVIGPNRAREVSLTCMPITAEMAEKWGLVNHIVDDTQVLSK 196
+ G+ P +G +Q+L R++G +A E+ L PI A + GLV+ +V +++
Sbjct: 139 LPELQLGVIPGFGGTQRLPRLVGLTKALEMMLLSKPIKGAEAHQLGLVDSLVSADDLVNT 198
Query: 197 ----AIEVCE 202
A+++CE
Sbjct: 199 ARRWALDICE 208
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.133 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 7,669,336
Number of extensions: 252968
Number of successful extensions: 578
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 575
Number of HSP's successfully gapped: 7
Length of query: 268
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 169
Effective length of database: 11,866,615
Effective search space: 2005457935
Effective search space used: 2005457935
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 155 (64.3 bits)