Os01g0348600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to MFP2 (Fatty acid multifunctional protein) (AtMFP2).
FiT-DB / Search/ Help/ Sample detail
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Os01g0348600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to MFP2 (Fatty acid multifunctional protein) (AtMFP2).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.29 | 0.232 | 11.1 | 0.0669 | 0.487 | -0.744 | 0.308 | -0.088 | -0.00221 | 13.4 | 29.4 | 1759 | -- | -- |
| 24.26 | 0.229 | 11.1 | 0.0429 | 0.483 | -0.752 | 0.314 | -- | -0.0193 | 13.4 | 29.4 | 1758 | -- | -- |
| 24.66 | 0.231 | 11.1 | 0.0655 | 0.48 | -0.741 | -- | -0.0684 | -0.00703 | 13.3 | 29.4 | 1758 | -- | -- |
| 24.65 | 0.231 | 11.1 | 0.0546 | 0.484 | -0.747 | -- | -- | -0.0172 | 13.3 | 29.37 | 1758 | -- | -- |
| 38.72 | 0.29 | 11.1 | -0.147 | -- | -0.827 | -- | 0.738 | -0.0913 | -- | 29.2 | 1746 | -- | -- |
| 44.4 | 0.312 | 11.1 | 0.256 | 0.502 | -- | 0.281 | -- | 0.0298 | 14 | -- | -- | -- | -- |
| 44.69 | 0.313 | 11.1 | 0.264 | 0.502 | -- | -- | -- | 0.0314 | 14 | -- | -- | -- | -- |
| 38.86 | 0.29 | 11.1 | 0.0352 | -- | -0.753 | -- | -- | -0.0444 | -- | 29.2 | 1746 | -- | -- |
| 24.73 | 0.232 | 11.1 | -- | 0.482 | -0.76 | -- | -- | -0.0253 | 13.3 | 29.32 | 1758 | -- | -- |
| 59.87 | 0.362 | 11.1 | 0.243 | -- | -- | -- | -- | 0.0196 | -- | -- | -- | -- | -- |
| 46.53 | 0.319 | 11.1 | -- | 0.497 | -- | -- | -- | 0.00196 | 14 | -- | -- | -- | -- |
| 38.89 | 0.29 | 11.1 | -- | -- | -0.76 | -- | -- | -0.0488 | -- | 29.2 | 1746 | -- | -- |
| 61.43 | 0.366 | 11.1 | -- | -- | -- | -- | -- | -0.0074 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.61 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 3 | 24.74 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 4 | 24.78 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 5 | 24.79 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 13 | 24.85 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 26 | 24.93 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 13 |
| 55 | 24.98 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 60 | 25.00 | temperature | 25 | 1440 | > th | dose dependent | sin | 21 | NA |
| 110 | 25.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 124 | 25.18 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 139 | 25.20 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 22 |
| 177 | 25.27 | temperature | 25 | 1440 | > th | dose dependent | rect. | 12 | 2 |
| 200 | 25.29 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 21 |
| 207 | 25.30 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 3 |
| 231 | 25.33 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 271 | 25.38 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 282 | 25.40 | temperature | 25 | 1440 | > th | dose dependent | rect. | 17 | 23 |
| 283 | 25.41 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 1 |
| 316 | 25.49 | temperature | 30 | 1440 | < th | dose independent | rect. | 3 | 13 |
| 319 | 25.49 | temperature | 30 | 1440 | < th | dose independent | rect. | 23 | 17 |
| 325 | 25.50 | temperature | 30 | 1440 | < th | dose independent | rect. | 8 | 8 |
| 339 | 25.52 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 1 |
| 352 | 25.55 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 353 | 25.55 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 15 |
| 355 | 25.55 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 17 |
| 358 | 25.57 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 409 | 25.63 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 21 |
| 423 | 25.66 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 21 |
| 471 | 25.72 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 2 |
| 499 | 25.77 | temperature | 30 | 1440 | > th | dose independent | rect. | 8 | 8 |
| 516 | 25.78 | temperature | 30 | 1440 | < th | dose independent | sin | 23 | NA |
| 542 | 25.82 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 15 |
| 550 | 25.83 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 10 |
| 590 | 25.86 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 598 | 25.87 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 602 | 25.87 | temperature | 30 | 1440 | < th | dose independent | rect. | 8 | 16 |
| 619 | 25.87 | temperature | 30 | 1440 | < th | dose independent | rect. | 8 | 20 |
| 716 | 25.89 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 746 | 25.91 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 765 | 25.92 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 7 |
| 802 | 25.94 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 5 |
| 851 | 25.98 | temperature | 30 | 1440 | > th | dose independent | sin | 23 | NA |
| 888 | 25.99 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 937 | 26.03 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 23 |
| 942 | 26.04 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |