BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0214400 Os03g0214400|AK067931
(476 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0214400 Similar to Digalactosyldiacylglycerol synthase 2 962 0.0
Os03g0268300 Similar to Digalactosyldiacylglycerol synthase 2 656 0.0
Os02g0539100 Similar to Digalactosyldiacylglycerol synthase 1 566 e-161
Os11g0158400 Similar to Digalactosyldiacylglycerol synthase 1 562 e-160
Os04g0416900 Similar to Digalactosyldiacylglycerol synthase 1 160 1e-39
>Os03g0214400 Similar to Digalactosyldiacylglycerol synthase 2
Length = 476
Score = 962 bits (2486), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/459 (100%), Positives = 459/459 (100%)
Query: 1 MSTRRHLAVFTTASLPWMTGTAINPLFRAAYLAKDGDREVTLVIPWLSLRDQELVYPNKI 60
MSTRRHLAVFTTASLPWMTGTAINPLFRAAYLAKDGDREVTLVIPWLSLRDQELVYPNKI
Sbjct: 1 MSTRRHLAVFTTASLPWMTGTAINPLFRAAYLAKDGDREVTLVIPWLSLRDQELVYPNKI 60
Query: 61 VFGSPLEHEAYVRRWIEERISFRPSFSIKFYPAKFSKELRSILPVGDITECIPDEVADVA 120
VFGSPLEHEAYVRRWIEERISFRPSFSIKFYPAKFSKELRSILPVGDITECIPDEVADVA
Sbjct: 61 VFGSPLEHEAYVRRWIEERISFRPSFSIKFYPAKFSKELRSILPVGDITECIPDEVADVA 120
Query: 121 VLEEPEHLNWYHHGRKWKNKFRRVIGVVHTNYIAYVKREKNGQAIACFMKYMNTWVTRIY 180
VLEEPEHLNWYHHGRKWKNKFRRVIGVVHTNYIAYVKREKNGQAIACFMKYMNTWVTRIY
Sbjct: 121 VLEEPEHLNWYHHGRKWKNKFRRVIGVVHTNYIAYVKREKNGQAIACFMKYMNTWVTRIY 180
Query: 181 CHKIIRLSGATQDLPRSVVCNVHGVNPKFLEVGKLKLKQLRNGEIAFTKGAYYIGKMVWS 240
CHKIIRLSGATQDLPRSVVCNVHGVNPKFLEVGKLKLKQLRNGEIAFTKGAYYIGKMVWS
Sbjct: 181 CHKIIRLSGATQDLPRSVVCNVHGVNPKFLEVGKLKLKQLRNGEIAFTKGAYYIGKMVWS 240
Query: 241 KGYRELLDLLSKYQSKLVGLEVDLYGSGEDSDEVRKSAELLSLAVKVHPGRDHADPLFHD 300
KGYRELLDLLSKYQSKLVGLEVDLYGSGEDSDEVRKSAELLSLAVKVHPGRDHADPLFHD
Sbjct: 241 KGYRELLDLLSKYQSKLVGLEVDLYGSGEDSDEVRKSAELLSLAVKVHPGRDHADPLFHD 300
Query: 301 YKVFINPSTTDVVCTTTAEALAMGKIVICANHPSNEFFKQFPNCRTYDSGEEFVQLTLDA 360
YKVFINPSTTDVVCTTTAEALAMGKIVICANHPSNEFFKQFPNCRTYDSGEEFVQLTLDA
Sbjct: 301 YKVFINPSTTDVVCTTTAEALAMGKIVICANHPSNEFFKQFPNCRTYDSGEEFVQLTLDA 360
Query: 361 LAEQPAPLTDMQSHDLSWEAATERFMEAAELNLPISAEPRIHQTSKVSLPAFMRTRKLKQ 420
LAEQPAPLTDMQSHDLSWEAATERFMEAAELNLPISAEPRIHQTSKVSLPAFMRTRKLKQ
Sbjct: 361 LAEQPAPLTDMQSHDLSWEAATERFMEAAELNLPISAEPRIHQTSKVSLPAFMRTRKLKQ 420
Query: 421 SLEDASVYLHQALSGLEVTRRAFGAVPKTLQPDEQLCND 459
SLEDASVYLHQALSGLEVTRRAFGAVPKTLQPDEQLCND
Sbjct: 421 SLEDASVYLHQALSGLEVTRRAFGAVPKTLQPDEQLCND 459
>Os03g0268300 Similar to Digalactosyldiacylglycerol synthase 2
Length = 463
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 306/459 (66%), Positives = 371/459 (80%), Gaps = 3/459 (0%)
Query: 1 MSTRRHLAVFTTASLPWMTGTAINPLFRAAYLAKDGDREVTLVIPWLSLRDQELVYPNKI 60
M+ ++H+A+FTTASLPWMTGTA+NPLFRAAYLAK GD EVTLV+PWLS DQ LVYPNK+
Sbjct: 1 MARKQHIAIFTTASLPWMTGTAVNPLFRAAYLAKAGDWEVTLVVPWLSKGDQLLVYPNKM 60
Query: 61 VFGSPLEHEAYVRRWIEERISFRPSFSIKFYPAKFSKELRSILPVGDITECIPDEVADVA 120
F P E E YVRRW+EERI P F IKFYP KFS E RSILP GDIT+ + D+ AD+A
Sbjct: 61 KFSVPGEQEGYVRRWLEERIGLLPKFEIKFYPGKFSTEKRSILPAGDITQTVSDDKADIA 120
Query: 121 VLEEPEHLNWYHHGRKWKNKFRRVIGVVHTNYIAYVKREKNGQAIACFMKYMNTWVTRIY 180
VLEEPEHL WYHHGR+WKNKFR+VIGVVHTNY+ YVKRE+NG A +K++N+WVT IY
Sbjct: 121 VLEEPEHLTWYHHGRRWKNKFRKVIGVVHTNYLEYVKRERNGYIHAFLLKHINSWVTDIY 180
Query: 181 CHKIIRLSGATQDLPRSVVCNVHGVNPKFLEVGKLKLKQLRNGEIAFTKGAYYIGKMVWS 240
CHK+IRLS ATQ++PRS+VCNVHGVNPKF+E+GKLK +Q+ E AF KGAYYIGKMVWS
Sbjct: 181 CHKVIRLSAATQEVPRSIVCNVHGVNPKFIEIGKLKHQQISQREQAFFKGAYYIGKMVWS 240
Query: 241 KGYRELLDLLSKYQSKLVGLEVDLYGSGEDSDEVRKSAELLSLAVKVHPGRDHADPLFHD 300
KGY ELL LL K+Q +L GL+++LYGSGEDSDEV+ SAE L+L V+V+PGRDH D +FHD
Sbjct: 241 KGYTELLQLLQKHQKELSGLKMELYGSGEDSDEVKASAEKLNLDVRVYPGRDHGDSIFHD 300
Query: 301 YKVFINPSTTDVVCTTTAEALAMGKIVICANHPSNEFFKQFPNCRTYDSGEEFVQLTLDA 360
YKVFINPSTTDVVCTTTAEALAMGKIVICANHPSNEFFK+FPNC Y++ +EFV+LT+ A
Sbjct: 301 YKVFINPSTTDVVCTTTAEALAMGKIVICANHPSNEFFKRFPNCHMYNTEKEFVRLTMKA 360
Query: 361 LAEQPAPLTDMQSHDLSWEAATERFMEAAELNLPISAEPRIHQTSKVSLPAFMRTRKLKQ 420
LAE+P PL++ H+LSWEAATERF+ A++ +S + H S ++ +LK+
Sbjct: 361 LAEEPIPLSEELRHELSWEAATERFVRVADIAPIMSI--KQHSPSPQYF-MYISPDELKK 417
Query: 421 SLEDASVYLHQALSGLEVTRRAFGAVPKTLQPDEQLCND 459
++E+AS + H A+SG E R FGA+P TLQPDEQ C +
Sbjct: 418 NMEEASAFFHNAISGFETARCVFGAIPNTLQPDEQQCKE 456
>Os02g0539100 Similar to Digalactosyldiacylglycerol synthase 1
Length = 802
Score = 566 bits (1458), Expect = e-161, Method: Compositional matrix adjust.
Identities = 264/459 (57%), Positives = 336/459 (73%), Gaps = 6/459 (1%)
Query: 3 TRRHLAVFTTASLPWMTGTAINPLFRAAYLAKDGDREVTLVIPWLSLRDQELVYPNKIVF 62
+RH+A+ TTASLPWMTGTA+NPLFRAAYLA++ ++VTLV+PWL DQELVYPN + F
Sbjct: 333 NKRHVAIVTTASLPWMTGTAVNPLFRAAYLARNSKQDVTLVVPWLCKSDQELVYPNSMTF 392
Query: 63 GSPLEHEAYVRRWIEERISFRPSFSIKFYPAKFSKELRSILPVGDITECIPDEVADVAVL 122
SP E E Y+++W+EER+ F +F I FYP KFSKE RSI+P GD ++ I AD+A+L
Sbjct: 393 SSPEEQETYIKKWLEERLGFESNFKISFYPGKFSKERRSIIPAGDTSQFISSREADIAIL 452
Query: 123 EEPEHLNWYHHGRKWKNKFRRVIGVVHTNYIAYVKREKNGQAIACFMKYMNTWVTRIYCH 182
EEPEHLNWYHHG +W +KF V+GVVHTNY+ Y+KREKNG A +K++N WVTR YC
Sbjct: 453 EEPEHLNWYHHGNRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFLVKHINNWVTRAYCD 512
Query: 183 KIIRLSGATQDLPRSVVCNVHGVNPKFLEVGKLKLKQLRNGEIAFTKGAYYIGKMVWSKG 242
K++RLS ATQDLP+S++CNVHGVNPKFL++G + NG+ +F+KGAY++GKMVW+KG
Sbjct: 513 KVLRLSAATQDLPKSIICNVHGVNPKFLKIGDKIMADRENGQQSFSKGAYFLGKMVWAKG 572
Query: 243 YRELLDLLSKYQSKLVGLEVDLYGSGEDSDEVRKSAELLSLAVKVHPGRDHADPLFHDYK 302
YRELLDLL K +S L G ++D+YGSGEDS EV+ +A+ L+L + GRDHAD H YK
Sbjct: 573 YRELLDLLDKRKSDLQGFKLDVYGSGEDSQEVQSTAKKLNLNLNFFKGRDHADDSLHGYK 632
Query: 303 VFINPSTTDVVCTTTAEALAMGKIVICANHPSNEFFKQFPNCRTYDSGEEFVQLTLDALA 362
VFINPS +DV+CT TAEALAMGK VICA HPSNEFF FPNC TY + EEFV +A+A
Sbjct: 633 VFINPSISDVLCTATAEALAMGKFVICAEHPSNEFFMSFPNCLTYRTPEEFVARVNEAMA 692
Query: 363 EQPAPLTDMQSHDLSWEAATERFMEAAELNLPISAEPRIHQTSKVSLPAFMRT--RKLKQ 420
+P PLT Q ++LSWEAATERFME ++L+ +S +P T V RT L
Sbjct: 693 REPQPLTPEQRYNLSWEAATERFMEYSDLDKVLS-QP---VTEGVHRSKTRRTIQSNLSD 748
Query: 421 SLEDASVYLHQALSGLEVTRRAFGAVPKTLQPDEQLCND 459
+++ + H L+G EV R A GA+P T D+Q C D
Sbjct: 749 AMDGGLAFAHHCLTGSEVLRLATGAIPGTRDYDKQHCVD 787
>Os11g0158400 Similar to Digalactosyldiacylglycerol synthase 1
Length = 736
Score = 562 bits (1448), Expect = e-160, Method: Compositional matrix adjust.
Identities = 259/468 (55%), Positives = 341/468 (72%), Gaps = 20/468 (4%)
Query: 2 STRRHLAVFTTASLPWMTGTAINPLFRAAYLAKDGDREVTLVIPWLSLRDQELVYPNKIV 61
+ +RH+A+ TTASLPWMTGTA+NPLFRAAYLAK ++VTLV+PWL DQELVYPN +
Sbjct: 256 ADKRHVAIVTTASLPWMTGTAVNPLFRAAYLAKSSKQDVTLVVPWLCKSDQELVYPNSMT 315
Query: 62 FGSPLEHEAYVRRWIEERISFRPSFSIKFYPAKFSKELRSILPVGDITECIPDEVADVAV 121
F SP E EAY+R W+EER+ F+ F I FYP KF KE RSI+P GD ++ IP + AD+A+
Sbjct: 316 FSSPQEQEAYMRSWLEERVGFKTDFKISFYPGKFQKERRSIIPAGDTSQFIPSKEADIAI 375
Query: 122 LEEPEHLNWYHHGRKWKNKFRRVIGVVHTNYIAYVKREKNGQAIACFMKYMNTWVTRIYC 181
LEEPEHLNWYHHG++W +KF V+GVVHTNY+ Y+KREKNG A F+K++N V R YC
Sbjct: 376 LEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYLEYIKREKNGVIQAFFVKHINNLVARAYC 435
Query: 182 HKIIRLSGATQDLPRSVVCNVHGVNPKFLEVGKLKLKQLRNGEIAFTKGAYYIGKMVWSK 241
HK++RLSGATQDLP+S++CNVHGVNPKFLEVG+ + +G+ +F+KGAY++GKMVW+K
Sbjct: 436 HKVLRLSGATQDLPKSMICNVHGVNPKFLEVGERIAAERESGQHSFSKGAYFLGKMVWAK 495
Query: 242 GYRELLDLLSKYQSKLVGLEVDLYGSGEDSDEVRKSAELLSLAVKVHPGRDHADPLFHDY 301
GYREL+DL +K++S L G+++D+YG+GEDS EV+ +A L+L + H GRDHAD H Y
Sbjct: 496 GYRELIDLYAKHKSDLEGIKLDIYGNGEDSHEVQSAAMKLNLNLNFHKGRDHADDSLHGY 555
Query: 302 KVFINPSTTDVVCTTTAEALAMGKIVICANHPSNEFFKQFPNCRTYDSGEEFVQLTLDAL 361
KVFINPS +DV+CT TAEALAMGK V+CA+HPSN+FF+ FPNC TY + E+FV +A+
Sbjct: 556 KVFINPSISDVLCTATAEALAMGKFVVCADHPSNDFFRSFPNCLTYKTSEDFVAKVKEAM 615
Query: 362 AEQPAPLTDMQSHDLSWEAATERFMEAAELNLPISAEPRIHQTS--------------KV 407
A P PLT Q ++LSWEAAT+RFME +EL+ +S+ R TS
Sbjct: 616 ARDPQPLTPEQRYNLSWEAATQRFMEHSELDKVLSSSNRDCTTSTSGCGKSGDNKMEKSA 675
Query: 408 SLPAFMRTRKLKQSLEDASVYLHQALSGLEVTRRAFGAVPKTLQPDEQ 455
SLP + ++ + H +G E+ R + GA+P TL ++Q
Sbjct: 676 SLP------NMSDMVDGGLAFAHYCFTGNELLRLSTGAIPGTLNYNKQ 717
>Os04g0416900 Similar to Digalactosyldiacylglycerol synthase 1
Length = 204
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/164 (52%), Positives = 107/164 (65%), Gaps = 8/164 (4%)
Query: 301 YKVFINPSTTDVVCTTTAEALAMGKIVICANHPSNEFFKQFPNCRTYDSGEEFVQLTLDA 360
YKVFINPS +DV+CT TAEALAMGK VICA+HPSNEFFK FPNC TY + EEFV +A
Sbjct: 29 YKVFINPSVSDVLCTATAEALAMGKFVICADHPSNEFFKSFPNCLTYKTSEEFVARVKEA 88
Query: 361 LAEQPAPLTDMQSHDLSWEAATERFMEAAE----LNLPISAEPRIHQTSKV-SLPAFMRT 415
+A +P+PLT Q + LSWEAATERFME +E LN I + + SKV +P R
Sbjct: 89 MASEPSPLTPEQRYSLSWEAATERFMEYSELDKVLNNKIGYSGQDGKRSKVRKIPLLPR- 147
Query: 416 RKLKQSLEDASVYLHQALSGLEVTRRAFGAVPKTLQPDEQLCND 459
L + ++ + H L+G E+ R A GA+P T D+Q C D
Sbjct: 148 --LSEVVDGGLAFAHHCLTGNEILRLATGAIPGTRDYDKQQCMD 189
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.135 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 15,770,624
Number of extensions: 653943
Number of successful extensions: 1662
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1659
Number of HSP's successfully gapped: 5
Length of query: 476
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 371
Effective length of database: 11,553,331
Effective search space: 4286285801
Effective search space used: 4286285801
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 158 (65.5 bits)