Os03g0268300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Digalactosyldiacylglycerol synthase 2.
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Os03g0268300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Digalactosyldiacylglycerol synthase 2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28.93 | 0.253 | 13.1 | -0.54 | 1.02 | 0.594 | 0.338 | -5.26 | 0.296 | 2.34 | 25.15 | 4081 | -- | -- |
| 35.38 | 0.279 | 13 | 0.633 | 1.14 | 0.363 | 0.255 | -- | 0.508 | 2.26 | 15.08 | 23503 | -- | -- |
| 29.29 | 0.252 | 13.1 | -0.547 | 1.02 | 0.598 | -- | -5.26 | 0.304 | 2.33 | 25.4 | 4200 | -- | -- |
| 35.6 | 0.28 | 13 | 0.628 | 1.13 | 0.364 | -- | -- | 0.507 | 2.26 | 7.29 | 47520 | -- | -- |
| 76.41 | 0.409 | 13 | 0.891 | -- | -1.02 | -- | 0.158 | 0.64 | -- | 25.4 | 4200 | -- | -- |
| 36.71 | 0.284 | 13 | 0.704 | 1.03 | -- | 0.201 | -- | 0.56 | 2.25 | -- | -- | -- | -- |
| 36.86 | 0.284 | 13 | 0.699 | 1.03 | -- | -- | -- | 0.559 | 2.25 | -- | -- | -- | -- |
| 76.42 | 0.409 | 13 | 0.874 | -- | -1.01 | -- | -- | 0.636 | -- | 25.4 | 4200 | -- | -- |
| 36.51 | 0.281 | 13 | -- | 1.02 | 0.585 | -- | -- | 0.306 | 2.26 | 2.258 | 47520 | -- | -- |
| 100.07 | 0.467 | 13 | 0.742 | -- | -- | -- | -- | 0.584 | -- | -- | -- | -- | -- |
| 49.72 | 0.33 | 13 | -- | 1.04 | -- | -- | -- | 0.481 | 2.26 | -- | -- | -- | -- |
| 96.18 | 0.458 | 13 | -- | -- | -0.878 | -- | -- | 0.534 | -- | 25.4 | 4200 | -- | -- |
| 114.59 | 0.5 | 13 | -- | -- | -- | -- | -- | 0.501 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 25.89 | wind | 1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 2 | 26.13 | wind | 1 | 43200 | < th | dose independent | rect. | 4 | 4 |
| 3 | 26.14 | wind | 1 | 43200 | > th | dose independent | rect. | 4 | 4 |
| 4 | 26.29 | wind | 1 | 43200 | < th | dose dependent | rect. | 4 | 4 |
| 8 | 26.66 | wind | 1 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 12 | 27.06 | radiation | 10 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 30 | 27.27 | radiation | 10 | 43200 | < th | dose independent | rect. | 9 | 1 |
| 31 | 27.27 | radiation | 20 | 43200 | < th | dose dependent | rect. | 7 | 3 |
| 32 | 27.38 | radiation | 10 | 43200 | > th | dose independent | rect. | 17 | 16 |
| 79 | 27.59 | radiation | 40 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 129 | 27.72 | radiation | 20 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 179 | 27.79 | radiation | 20 | 43200 | < th | dose dependent | sin | 7 | NA |
| 203 | 27.82 | radiation | 20 | 43200 | > th | dose independent | sin | 9 | NA |
| 223 | 27.84 | radiation | 40 | 43200 | > th | dose independent | rect. | 11 | 4 |
| 280 | 27.88 | radiation | 30 | 43200 | > th | dose independent | rect. | 11 | 1 |
| 306 | 27.90 | radiation | 40 | 43200 | < th | dose dependent | rect. | 11 | 1 |
| 335 | 27.94 | radiation | 40 | 43200 | > th | dose independent | sin | 16 | NA |
| 354 | 27.94 | radiation | 1 | 43200 | > th | dose dependent | rect. | 11 | 1 |
| 445 | 28.00 | radiation | 20 | 43200 | > th | dose independent | rect. | 7 | 9 |
| 606 | 28.06 | radiation | 20 | 43200 | > th | dose independent | no | NA | NA |
| 897 | 28.12 | radiation | 40 | 43200 | > th | dose independent | no | NA | NA |