Os11g0158400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Digalactosyldiacylglycerol synthase 1.
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Os11g0158400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Digalactosyldiacylglycerol synthase 1.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 71.4 | 0.397 | 11.9 | 1.06 | 3.34 | 0.895 | 1.24 | 0.453 | -0.112 | 5.93 | 20.1 | 1390 | -- | -- |
| 71.59 | 0.394 | 11.8 | 1.14 | 3.35 | 0.8 | 1.21 | -- | -0.0894 | 5.93 | 20.4 | 1396 | -- | -- |
| 75 | 0.403 | 11.9 | 1.09 | 3.32 | 0.887 | -- | 0.338 | -0.0994 | 5.9 | 20.3 | 1396 | -- | -- |
| 75.18 | 0.404 | 11.8 | 1.15 | 3.34 | 0.826 | -- | -- | -0.0929 | 5.92 | 20.4 | 1397 | -- | -- |
| 534.24 | 1.08 | 11.9 | 1.11 | -- | 1.11 | -- | 0.204 | 0.116 | -- | 25.8 | 1891 | -- | -- |
| 85.34 | 0.433 | 11.9 | 0.796 | 3.32 | -- | 1.38 | -- | -0.269 | 5.96 | -- | -- | -- | -- |
| 89.94 | 0.444 | 11.9 | 0.807 | 3.33 | -- | -- | -- | -0.275 | 5.93 | -- | -- | -- | -- |
| 379.32 | 0.907 | 11.5 | 1.94 | -- | 2.13 | -- | -- | 1.05 | -- | 26.28 | 313 | -- | -- |
| 105 | 0.477 | 11.8 | -- | 3.26 | 0.376 | -- | -- | -0.179 | 5.81 | 22.4 | 2243 | -- | -- |
| 663.18 | 1.2 | 11.9 | 0.906 | -- | -- | -- | -- | -0.198 | -- | -- | -- | -- | -- |
| 107.12 | 0.484 | 11.9 | -- | 3.34 | -- | -- | -- | -0.364 | 5.92 | -- | -- | -- | -- |
| 385.89 | 0.915 | 11.9 | -- | -- | 2.17 | -- | -- | 0.259 | -- | 26.4 | 350 | -- | -- |
| 684.85 | 1.22 | 12 | -- | -- | -- | -- | -- | -0.299 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 66.89 | temperature | 10 | 270 | > th | dose dependent | rect. | 5 | 19 |
| 9 | 69.38 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 12 | 69.60 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 9 |
| 13 | 69.62 | temperature | 20 | 1440 | < th | dose independent | rect. | 2 | 5 |
| 15 | 69.64 | temperature | 20 | 1440 | < th | dose independent | rect. | 1 | 9 |
| 24 | 69.70 | temperature | 20 | 1440 | > th | dose independent | rect. | 1 | 6 |
| 29 | 69.72 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 43 | 69.78 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 13 |
| 47 | 69.79 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 13 |
| 48 | 69.80 | temperature | 20 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 62 | 69.85 | temperature | 20 | 1440 | > th | dose independent | sin | 6 | NA |
| 72 | 69.89 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 9 |
| 78 | 69.91 | temperature | 20 | 1440 | < th | dose independent | sin | 6 | NA |
| 93 | 69.95 | temperature | 20 | 1440 | > th | dose independent | rect. | 22 | 17 |
| 102 | 69.97 | temperature | 20 | 1440 | < th | dose independent | rect. | 22 | 17 |
| 124 | 70.04 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 1 |
| 128 | 70.05 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 1 |
| 156 | 70.14 | temperature | 15 | 10 | > th | dose dependent | rect. | 6 | 20 |
| 213 | 70.36 | wind | 9 | 43200 | > th | dose independent | rect. | 10 | 4 |
| 335 | 71.00 | humidity | 60 | 43200 | < th | dose independent | rect. | 21 | 12 |
| 344 | 71.04 | wind | 9 | 43200 | < th | dose independent | rect. | 10 | 4 |
| 346 | 71.04 | temperature | 20 | 1440 | < th | dose independent | rect. | 15 | 16 |
| 374 | 71.12 | wind | 9 | 43200 | > th | dose independent | rect. | 9 | 8 |
| 378 | 71.12 | temperature | 20 | 4320 | < th | dose dependent | rect. | 5 | 2 |
| 380 | 71.13 | humidity | 60 | 43200 | > th | dose independent | rect. | 21 | 12 |
| 391 | 71.16 | temperature | 20 | 1440 | > th | dose independent | rect. | 15 | 16 |
| 402 | 71.18 | wind | 3 | 43200 | > th | dose independent | rect. | 1 | 1 |
| 417 | 71.21 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 18 |
| 447 | 71.27 | humidity | 60 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 459 | 71.30 | humidity | 60 | 43200 | > th | dose independent | rect. | 8 | 1 |
| 472 | 71.32 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 481 | 71.33 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 486 | 71.33 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 10 |
| 493 | 71.35 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 24 | 1 |
| 526 | 71.39 | humidity | 50 | 14400 | > th | dose dependent | rect. | 5 | 1 |
| 530 | 71.40 | humidity | 60 | 43200 | < th | dose independent | rect. | 2 | 7 |
| 538 | 71.41 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 19 | 6 |
| 593 | 71.48 | wind | 3 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 641 | 71.53 | temperature | 20 | 1440 | < th | dose independent | no | NA | NA |
| 646 | 71.53 | wind | 3 | 43200 | < th | dose dependent | rect. | 22 | 2 |
| 667 | 71.55 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 9 |
| 671 | 71.56 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 19 | 12 |
| 699 | 71.59 | temperature | 20 | 1440 | > th | dose independent | no | NA | NA |
| 734 | 71.63 | atmosphere | 1015 | 43200 | < th | dose independent | sin | 13 | NA |
| 766 | 71.65 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 19 | 13 |
| 779 | 71.67 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 813 | 71.69 | humidity | 60 | 43200 | < th | dose dependent | rect. | 20 | 14 |
| 838 | 71.71 | wind | 9 | 43200 | < th | dose independent | rect. | 9 | 8 |
| 847 | 71.71 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 19 | 19 |
| 878 | 71.73 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 6 | 19 |
| 881 | 71.73 | humidity | 70 | 43200 | < th | dose dependent | rect. | 21 | 12 |
| 884 | 71.74 | atmosphere | 1015 | 43200 | > th | dose independent | sin | 13 | NA |
| 944 | 71.76 | wind | 3 | 43200 | < th | dose dependent | rect. | 22 | 4 |
| 950 | 71.77 | atmosphere | 1015 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 966 | 71.77 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 992 | 71.78 | atmosphere | 1015 | 43200 | > th | dose dependent | rect. | 6 | 7 |
| 1000 | 71.79 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 6 | 1 |