Os03g0214400
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Digalactosyldiacylglycerol synthase 2.
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Os03g0214400 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Digalactosyldiacylglycerol synthase 2.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 59.04 | 0.361 | 10.1 | -0.0644 | 1.1 | 0.681 | 1.36 | -0.945 | 0.408 | 5.9 | 30.88 | 1229 | -- | -- |
| 59.09 | 0.358 | 10.1 | 0.0893 | 1.1 | 0.569 | 1.37 | -- | 0.41 | 5.93 | 31.14 | 1200 | -- | -- |
| 63.47 | 0.371 | 10.1 | -0.0333 | 1.1 | 0.684 | -- | -0.81 | 0.406 | 6.02 | 31.07 | 1229 | -- | -- |
| 63.48 | 0.371 | 10.1 | 0.0995 | 1.1 | 0.59 | -- | -- | 0.405 | 6.02 | 31.03 | 1229 | -- | -- |
| 124.02 | 0.519 | 10.1 | 0.62 | -- | 0.473 | -- | 2.26 | 0.412 | -- | 26.25 | 1292 | -- | -- |
| 74.9 | 0.406 | 10.1 | 0.241 | 1.13 | -- | 1.5 | -- | 0.3 | 5.61 | -- | -- | -- | -- |
| 80.33 | 0.42 | 10.1 | 0.249 | 1.14 | -- | -- | -- | 0.294 | 5.74 | -- | -- | -- | -- |
| 124.71 | 0.52 | 10.2 | 0.0095 | -- | 0.781 | -- | -- | 0.229 | -- | 24.4 | 1308 | -- | -- |
| 63.72 | 0.372 | 10.1 | -- | 1.1 | 0.604 | -- | -- | 0.4 | 6.02 | 30.8 | 1229 | -- | -- |
| 147.22 | 0.567 | 10.1 | 0.285 | -- | -- | -- | -- | 0.321 | -- | -- | -- | -- | -- |
| 81.97 | 0.424 | 10.1 | -- | 1.14 | -- | -- | -- | 0.266 | 5.73 | -- | -- | -- | -- |
| 124.46 | 0.52 | 10.2 | -- | -- | 0.796 | -- | -- | 0.2 | -- | 24.3 | 1288 | -- | -- |
| 149.36 | 0.57 | 10.1 | -- | -- | -- | -- | -- | 0.289 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 57.50 | temperature | 20 | 270 | > th | dose dependent | rect. | 1 | 6 |
| 2 | 57.89 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 8 |
| 4 | 58.25 | temperature | 20 | 30 | > th | dose dependent | rect. | 3 | 6 |
| 6 | 58.40 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 14 |
| 10 | 58.61 | temperature | 25 | 720 | > th | dose dependent | rect. | 21 | 1 |
| 20 | 59.09 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 8 |
| 21 | 59.11 | temperature | 10 | 720 | > th | dose dependent | sin | 14 | NA |
| 28 | 59.22 | radiation | 40 | 1440 | > th | dose dependent | sin | 14 | NA |
| 30 | 59.27 | temperature | 20 | 720 | > th | dose dependent | sin | 14 | NA |
| 33 | 59.31 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 37 | 59.35 | temperature | 20 | 720 | > th | dose dependent | rect. | 15 | 15 |
| 49 | 59.53 | radiation | 30 | 4320 | < th | dose independent | rect. | 21 | 11 |
| 51 | 59.54 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 52 | 59.55 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 57 | 59.56 | temperature | 30 | 1440 | > th | dose dependent | rect. | 14 | 5 |
| 87 | 59.59 | temperature | 30 | 1440 | > th | dose dependent | sin | 14 | NA |
| 102 | 59.60 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 12 |
| 109 | 59.61 | temperature | 30 | 1440 | > th | dose dependent | rect. | 15 | 2 |
| 137 | 59.66 | temperature | 10 | 720 | > th | dose dependent | rect. | 13 | 16 |
| 146 | 59.68 | radiation | 30 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 148 | 59.68 | temperature | 25 | 1440 | > th | dose dependent | rect. | 4 | 3 |
| 150 | 59.68 | radiation | 40 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 153 | 59.70 | radiation | 20 | 1440 | < th | dose independent | rect. | 16 | 9 |
| 156 | 59.70 | radiation | 40 | 1440 | > th | dose dependent | rect. | 13 | 3 |
| 217 | 59.79 | radiation | 30 | 4320 | < th | dose independent | rect. | 2 | 6 |
| 278 | 59.92 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 16 |
| 279 | 59.92 | radiation | 40 | 1440 | > th | dose dependent | rect. | 11 | 5 |
| 303 | 59.93 | wind | 9 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 340 | 59.97 | radiation | 30 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 430 | 60.04 | temperature | 30 | 1440 | > th | dose dependent | no | NA | NA |
| 589 | 60.12 | temperature | 20 | 270 | > th | dose independent | rect. | 1 | 7 |
| 663 | 60.27 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 10 |
| 669 | 60.28 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 6 |
| 693 | 60.32 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 842 | 60.55 | temperature | 30 | 1440 | > th | dose independent | sin | 13 | NA |
| 880 | 60.61 | temperature | 20 | 10 | > th | dose dependent | rect. | 24 | 9 |
| 916 | 60.65 | temperature | 30 | 1440 | < th | dose independent | sin | 12 | NA |
| 943 | 60.71 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 949 | 60.71 | humidity | 70 | 720 | > th | dose independent | rect. | 18 | 9 |