BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0206100 Os03g0206100|Os03g0206100
(589 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0206100 Protein of unknown function DUF566 family protein 701 0.0
Os03g0762900 Protein of unknown function DUF566 family protein 213 2e-55
Os07g0115600 157 2e-38
Os09g0422600 Protein of unknown function DUF566 family protein 154 2e-37
Os02g0794300 Protein of unknown function DUF566 family protein 123 3e-28
Os10g0345600 Protein of unknown function DUF566 family protein 120 4e-27
Os09g0286300 Protein of unknown function DUF566 family protein 105 1e-22
Os10g0345701 Protein of unknown function DUF566 family protein 96 8e-20
Os03g0581500 79 8e-15
>Os03g0206100 Protein of unknown function DUF566 family protein
Length = 589
Score = 701 bits (1810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 359/471 (76%), Positives = 359/471 (76%)
Query: 119 MRSLSVSFQGESFFYQTXXXXXXXXXXXXXXXXXXTPERRKSVSSVPEAENTRPQHRWPA 178
MRSLSVSFQGESFFYQT TPERRKSVSSVPEAENTRPQHRWPA
Sbjct: 119 MRSLSVSFQGESFFYQTSRAPRAASPSSPGGRRGPTPERRKSVSSVPEAENTRPQHRWPA 178
Query: 179 AKPKASDPLARSLDCSLDRKDSILAAVHLLRRSMAFXXXXXXXXXXXXXXXXXXXXXXXX 238
AKPKASDPLARSLDCSLDRKDSILAAVHLLRRSMAF
Sbjct: 179 AKPKASDPLARSLDCSLDRKDSILAAVHLLRRSMAFDSTTSLSPSDPAAAAAAAHDLSAS 238
Query: 239 XXXXXXXXXXXXXXXXPPRRGISVPARFWQETNXXXXXXXXXXXXXXXXXXXXXFSDSQM 298
PPRRGISVPARFWQETN FSDSQM
Sbjct: 239 SDTDSVSSGSNSGAGDPPRRGISVPARFWQETNSRLRRLPEPGLPLPSSSGRRSFSDSQM 298
Query: 299 XXXXXXXXXXXXXXXXXMASPARGRSGEASPNGHTMQAPANAPSIISFAAEVRRAKKGEN 358
MASPARGRSGEASPNGHTMQAPANAPSIISFAAEVRRAKKGEN
Sbjct: 299 SPRLPGRSPSPSRGSRGMASPARGRSGEASPNGHTMQAPANAPSIISFAAEVRRAKKGEN 358
Query: 359 RIEEAHRLRLLDNRHLQWRCINARTDAALLVQSFNAEKTLHSAWKEISKLRDNVXXXXXX 418
RIEEAHRLRLLDNRHLQWRCINARTDAALLVQSFNAEKTLHSAWKEISKLRDNV
Sbjct: 359 RIEEAHRLRLLDNRHLQWRCINARTDAALLVQSFNAEKTLHSAWKEISKLRDNVSSKRSK 418
Query: 419 XXXXXXXXXXFAILRRQIYYLDEWSHIEKHHSSALSAAIEALKASTLRLPVVGGAKADAQ 478
FAILRRQIYYLDEWSHIEKHHSSALSAAIEALKASTLRLPVVGGAKADAQ
Sbjct: 419 LQLLKQKLKLFAILRRQIYYLDEWSHIEKHHSSALSAAIEALKASTLRLPVVGGAKADAQ 478
Query: 479 GVKEAVNSAVDVMHTMASSMCTLLSKVEGTSSVVSELAKLATQEQMLLDQSRDLLSMVAA 538
GVKEAVNSAVDVMHTMASSMCTLLSKVEGTSSVVSELAKLATQEQMLLDQSRDLLSMVAA
Sbjct: 479 GVKEAVNSAVDVMHTMASSMCTLLSKVEGTSSVVSELAKLATQEQMLLDQSRDLLSMVAA 538
Query: 539 IHLASSYATTKAKAEPDTGVDQFVLPHWWSTNITRPHLFTLETVLQTWLAA 589
IHLASSYATTKAKAEPDTGVDQFVLPHWWSTNITRPHLFTLETVLQTWLAA
Sbjct: 539 IHLASSYATTKAKAEPDTGVDQFVLPHWWSTNITRPHLFTLETVLQTWLAA 589
>Os03g0762900 Protein of unknown function DUF566 family protein
Length = 615
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 155/453 (34%), Positives = 217/453 (47%), Gaps = 34/453 (7%)
Query: 120 RSLSVSFQGESFFYQTXXXXXXXXXXXX---XXXXXXTPERRK-SVSSVPEA----ENTR 171
RSLSV+FQG ++F +T TPERR+ S+ +VPE E
Sbjct: 145 RSLSVAFQGRAYFLETSKAKPATSPSPVRRPVAAASTTPERRRPSMGTVPERGKVFEGGH 204
Query: 172 PQHRWP----AAKPKASDPLARSLDCSLDRKDS-ILAAVHLLRRSMAFXXXXXXXXXXXX 226
Q RWP AA +PL +SLDCSLD++ + +LAAV LR+SM F
Sbjct: 205 SQQRWPMSARAAHGFEGNPLTKSLDCSLDKRGAAVLAAVRSLRQSMVFEEGVRRASFDSG 264
Query: 227 XXXXXXXXXXXXXXXXXXXXXXXXXXXXPPRRGISVPARFWQET---------------- 270
+G+SVPARF Q+
Sbjct: 265 DYLMSSDTESVSSGSNSGSQDAGMGRARSSPKGMSVPARFLQDAAASRPNRLADPSTPFM 324
Query: 271 NXXXXXXXXXXXXXXXXXXXXXFSDSQMXXXXXXXXXXXXXXXXXMASPA--RGRSGEAS 328
F S + M+SP+ RG G ++
Sbjct: 325 THSSGFASSPRTAPVKKSLLNGFVSSPLNRPIRQPSPSKLVGSRRMSSPSQPRGSVGVSA 384
Query: 329 PNGHTMQAPANAPSIISFAAEVRRAKKGENRIEEAHRLRLLDNRHLQWRCINARTDAALL 388
G + S ++V+R G ++++ H LR+L NRHLQWRC+NA+ DAAL
Sbjct: 385 SYGDQH---GRSSSGYGLDSQVKRRWLGCSKVDCEHLLRILCNRHLQWRCVNAQADAALA 441
Query: 389 VQSFNAEKTLHSAWKEISKLRDNVXXXXXXXXXXXXXXXXFAILRRQIYYLDEWSHIEKH 448
Q AEK L AW +R +V +L+ Q+ +L+EWS +E+
Sbjct: 442 AQKMTAEKYLSDAWITTLGMRKSVALKRFQLQLFRNNWKLMTVLKGQMDFLEEWSFLERD 501
Query: 449 HSSALSAAIEALKASTLRLPVVGGAKADAQGVKEAVNSAVDVMHTMASSMCTLLSKVEGT 508
H+++LS +EAL A+ L LPV GAKAD Q VK AV SAVD+M T+ SS+CTLL+K+ GT
Sbjct: 502 HANSLSGIVEALTATILCLPVTDGAKADIQDVKNAVGSAVDIMQTIGSSICTLLAKLSGT 561
Query: 509 SSVVSELAKLATQEQMLLDQSRDLLSMVAAIHL 541
S +VS+LAK+ATQE+ L+DQSR+LLS +A++H+
Sbjct: 562 SILVSDLAKIATQERTLMDQSRELLSTLASMHV 594
>Os07g0115600
Length = 462
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 114/187 (60%)
Query: 355 KGENRIEEAHRLRLLDNRHLQWRCINARTDAALLVQSFNAEKTLHSAWKEISKLRDNVXX 414
+ + + EE H+LRLL NRHLQWR NA AA+ Q NAEK L AW I + ++
Sbjct: 248 QAQGKAEEEHQLRLLHNRHLQWRLANAVAGAAISAQELNAEKQLCGAWVSILGMSKSIAL 307
Query: 415 XXXXXXXXXXXXXXFAILRRQIYYLDEWSHIEKHHSSALSAAIEALKASTLRLPVVGGAK 474
L+ Q+ YL+EWS +E ++++LS +EAL A+ LRLPV GA
Sbjct: 308 KKLELQLLRQNCKVMNTLKGQMAYLEEWSLLENKYANSLSGTVEALNATVLRLPVSDGAV 367
Query: 475 ADAQGVKEAVNSAVDVMHTMASSMCTLLSKVEGTSSVVSELAKLATQEQMLLDQSRDLLS 534
AD Q VK AV SAVDVM TM +SM LL K+ T+ +VS+L+ + QEQ+L+ Q R+LLS
Sbjct: 368 ADFQSVKNAVGSAVDVMQTMRNSMSYLLPKLARTNVLVSQLSIITRQEQVLMAQCRELLS 427
Query: 535 MVAAIHL 541
+A +H+
Sbjct: 428 TLALMHV 434
>Os09g0422600 Protein of unknown function DUF566 family protein
Length = 579
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 135/229 (58%), Gaps = 3/229 (1%)
Query: 318 SPARGR--SGEASPNGHTMQAPANAPSIISFAAEVRRAKKGENRIEEAHRLRLLDNRHLQ 375
SP+R R + S + ++Q+ +P IIS+ + ++ KK ++IE H+L L NR+LQ
Sbjct: 335 SPSRTRPSTPSRSQSAGSIQSGVASP-IISYMVDAKKGKKNSSQIENIHQLHLSYNRYLQ 393
Query: 376 WRCINARTDAALLVQSFNAEKTLHSAWKEISKLRDNVXXXXXXXXXXXXXXXXFAILRRQ 435
W +NA + + Q AE +++ + S LRD V IL+ Q
Sbjct: 394 WIFVNAYAEDTMSFQKVTAESIIYNVLRNTSNLRDVVNMRRIMVQCIQQELKLHGILKEQ 453
Query: 436 IYYLDEWSHIEKHHSSALSAAIEALKASTLRLPVVGGAKADAQGVKEAVNSAVDVMHTMA 495
I YL++W +EK +S +L A EALKASTLRLPV GAKAD +K AV+SAVD+M +
Sbjct: 454 IDYLEQWPALEKENSISLFHATEALKASTLRLPVTSGAKADVVALKNAVSSAVDIMQGLG 513
Query: 496 SSMCTLLSKVEGTSSVVSELAKLATQEQMLLDQSRDLLSMVAAIHLASS 544
S++ +L KVE + +VSEL+ +A QE+ +LD+ R+LL+M A + + S
Sbjct: 514 SAVRCMLPKVEDRTYLVSELSVIARQEKAMLDECRELLAMAAKLQVQES 562
>Os02g0794300 Protein of unknown function DUF566 family protein
Length = 160
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/158 (43%), Positives = 97/158 (61%)
Query: 398 LHSAWKEISKLRDNVXXXXXXXXXXXXXXXXFAILRRQIYYLDEWSHIEKHHSSALSAAI 457
L+S W S L D++ +L+ Q+ YL W+ +E HS++LS+AI
Sbjct: 3 LYSVWDANSSLCDSMVMKRSYVQRLRQEVKLGVVLKEQMDYLTHWAALETEHSTSLSSAI 62
Query: 458 EALKASTLRLPVVGGAKADAQGVKEAVNSAVDVMHTMASSMCTLLSKVEGTSSVVSELAK 517
EAL+ASTLRLPV GGAKAD VK AV+SAVD+M M SS+C LLSK++ T S+V+EL+
Sbjct: 63 EALRASTLRLPVTGGAKADVFTVKNAVSSAVDIMQAMGSSVCYLLSKLQATHSLVTELSA 122
Query: 518 LATQEQMLLDQSRDLLSMVAAIHLASSYATTKAKAEPD 555
+A E +L++ R+LL AA+ + S T+ E +
Sbjct: 123 VAANESSMLNEYRELLGTAAALQVLESSLRTQLIQETE 160
>Os10g0345600 Protein of unknown function DUF566 family protein
Length = 322
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/262 (36%), Positives = 105/262 (40%), Gaps = 58/262 (22%)
Query: 119 MRSLSVSFQGESFFYQTXXXXXXXXXXXXXXXXXXTPERRKSVSSVPEAENTRPQHRWPA 178
MRSLSVSFQGESF Y+T + EAEN RP P
Sbjct: 85 MRSLSVSFQGESFVYETPRAAAPRRAPAAAAARPRP-----TTRRRGEAENERPS---PP 136
Query: 179 AKPKASDPLARSLDCSLDRKDSILAAVHLLRRSMAFXXXXXXXXXXXXXXXXXXXXXXXX 238
KA+D LARSLDCSL RK+SILAAV LLR S++
Sbjct: 137 PASKATDALARSLDCSLHRKESILAAVRLLRSSISPGNAAAAAAPDADAATDTDTDAAPP 196
Query: 239 XXXXXXXXXXXXXXXXPPRRGISVPARFWQETNXXXXXXXXXXXXXXXXXXXXXFSDSQM 298
I RFWQETN F D +
Sbjct: 197 --------------------SIPTQTRFWQETNSRLRRLPESGLPHPISTSRKPFLDGPI 236
Query: 299 XXXXXXXXXXXXXXXXXMASPARGRSGEASPNGHTMQAPANAPSIISFAAEVRRAKKGEN 358
E SP ANAPSIISFA VRRA KGE+
Sbjct: 237 SPTLL----------------------ETSP--------ANAPSIISFATAVRRANKGED 266
Query: 359 RIEEAHRLRLLDNRHLQWRCIN 380
+IEEAHRLRLLDNR LQWRC+N
Sbjct: 267 KIEEAHRLRLLDNRQLQWRCLN 288
>Os09g0286300 Protein of unknown function DUF566 family protein
Length = 484
Score = 105 bits (262), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 104/181 (57%)
Query: 353 AKKGENRIEEAHRLRLLDNRHLQWRCINARTDAALLVQSFNAEKTLHSAWKEISKLRDNV 412
+K + E+ H+LR+L+N +LQ+R +NAR +A ++ AEK+L + I+ LR +V
Sbjct: 290 GRKVPGKQEDVHQLRMLENSYLQYRFMNARAEAVARAKASVAEKSLFGLEERITALRVSV 349
Query: 413 XXXXXXXXXXXXXXXXFAILRRQIYYLDEWSHIEKHHSSALSAAIEALKASTLRLPVVGG 472
+++ Q+ +LD+W +E HSS+L AL S+LRLPV+G
Sbjct: 350 AEKKMEVERMRREQTLRSVVDAQVPHLDQWCDLEGDHSSSLIGLTSALYNSSLRLPVIGN 409
Query: 473 AKADAQGVKEAVNSAVDVMHTMASSMCTLLSKVEGTSSVVSELAKLATQEQMLLDQSRDL 532
+A+++ + E +NS+V ++ ++S + L KV+ V ++LA++ E++ +++ +L
Sbjct: 410 VRANSEEITEVLNSSVQLLEPVSSCVKNFLPKVQEVDDVAAKLAQVIASERVAIEECGNL 469
Query: 533 L 533
L
Sbjct: 470 L 470
>Os10g0345701 Protein of unknown function DUF566 family protein
Length = 91
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 61/71 (85%)
Query: 435 QIYYLDEWSHIEKHHSSALSAAIEALKASTLRLPVVGGAKADAQGVKEAVNSAVDVMHTM 494
QI YL+EWS +E +HSS++S AI+AL+AST+RLP+V GAKADAQGVK+ V+SA+ M TM
Sbjct: 3 QISYLEEWSDVENNHSSSMSEAIKALEASTIRLPIVCGAKADAQGVKKVVSSALTKMDTM 62
Query: 495 ASSMCTLLSKV 505
ASSM +LLSKV
Sbjct: 63 ASSMWSLLSKV 73
>Os03g0581500
Length = 525
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 1/190 (0%)
Query: 351 RRAKKGENRIEEAHRLRLLDNRHLQWRCINARTDAALLVQSFNAEKTLHSAWKEISKLRD 410
RR+ G NR E H+++++ R LQWR NA+ +A + E AW IS+L+
Sbjct: 298 RRSGGGGNR-EIGHQMKMMHCRLLQWRFANAKAEAVSKNKLSIFEVEFMGAWARISELQG 356
Query: 411 NVXXXXXXXXXXXXXXXXFAILRRQIYYLDEWSHIEKHHSSALSAAIEALKASTLRLPVV 470
V ++L Q+ L+ W +E H+ AL + + +A+ +LP+
Sbjct: 357 KVARRRVQLEKEKLKIKLNSVLSSQMRGLESWGQLESKHAVALDSTVVCTQAAICKLPLT 416
Query: 471 GGAKADAQGVKEAVNSAVDVMHTMASSMCTLLSKVEGTSSVVSELAKLATQEQMLLDQSR 530
GAK + + A+D+ T + + + T+ +++EL +A +E LL +
Sbjct: 417 NGAKISLPSMGIILQQALDLTMTTKTIVRSFTPMAHDTTLLITELVAVAREEHALLQECL 476
Query: 531 DLLSMVAAIH 540
+LL V+A+
Sbjct: 477 ELLGRVSALQ 486
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.126 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,462,254
Number of extensions: 362371
Number of successful extensions: 1277
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 1268
Number of HSP's successfully gapped: 12
Length of query: 589
Length of database: 17,035,801
Length adjustment: 106
Effective length of query: 483
Effective length of database: 11,501,117
Effective search space: 5555039511
Effective search space used: 5555039511
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 159 (65.9 bits)