Os03g0206100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF566 family protein.
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Os03g0206100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF566 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 472.03 | 1.02 | 6.39 | -5.66 | 2.01 | -3.29 | -2.87 | 1.33 | -1.97 | 14.5 | 26.1 | 2390 | -- | -- |
| 470.9 | 1.01 | 6.37 | -5.3 | 1.91 | -3.29 | -2.67 | -- | -1.9 | 14.3 | 26.2 | 2260 | -- | -- |
| 497.88 | 1.04 | 6.37 | -5.64 | 1.93 | -3.27 | -- | 0.972 | -1.92 | 14.3 | 26.3 | 2308 | -- | -- |
| 497.92 | 1.04 | 6.34 | -5.33 | 1.89 | -3.2 | -- | -- | -1.84 | 14.3 | 26.4 | 2285 | -- | -- |
| 632.96 | 1.17 | 6.42 | -5.54 | -- | -3.06 | -- | 1.07 | -2.03 | -- | 26.3 | 1768 | -- | -- |
| 814 | 1.34 | 6.15 | -4.08 | 1.63 | -- | -3.31 | -- | -0.947 | 15.4 | -- | -- | -- | -- |
| 847.86 | 1.36 | 6.16 | -4.14 | 1.62 | -- | -- | -- | -0.966 | 15.6 | -- | -- | -- | -- |
| 632.66 | 1.17 | 6.35 | -5.34 | -- | -2.99 | -- | -- | -1.79 | -- | 26.7 | 1759 | -- | -- |
| 1180.27 | 1.6 | 6.15 | -- | 1.83 | -1.87 | -- | -- | -0.955 | 14.8 | 25.9 | 2258 | -- | -- |
| 993.79 | 1.47 | 6.16 | -4.21 | -- | -- | -- | -- | -1.01 | -- | -- | -- | -- | -- |
| 1299.35 | 1.69 | 6.06 | -- | 1.7 | -- | -- | -- | -0.505 | 15.6 | -- | -- | -- | -- |
| 1296.79 | 1.68 | 6.11 | -- | -- | -2.03 | -- | -- | -0.774 | -- | 28.7 | 1780 | -- | -- |
| 1460.59 | 1.78 | 6.05 | -- | -- | -- | -- | -- | -0.542 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 465.74 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 7 | 7 |
| 12 | 467.65 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 11 | 22 |
| 17 | 468.43 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 10 |
| 18 | 468.48 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 6 | 13 |
| 20 | 468.73 | temperature | 20.0 | 1440 | > th | dose dependent | sin | 1 | NA |
| 49 | 469.52 | wind | 5.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 188 | 472.47 | temperature | 15.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 253 | 473.63 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 20 | 3 |
| 295 | 474.74 | wind | 5.0 | 43200 | > th | dose independent | rect. | 20 | 1 |
| 345 | 475.70 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 7 | 23 |
| 353 | 475.88 | wind | 5.0 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 439 | 477.35 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 11 |
| 444 | 477.44 | temperature | 20.0 | 1440 | > th | dose dependent | no | NA | NA |
| 456 | 477.70 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 18 | 23 |
| 464 | 477.88 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 466 | 477.89 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 16 | 23 |
| 473 | 478.00 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 520 | 478.81 | temperature | 15.0 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 586 | 480.04 | wind | 9.0 | 43200 | > th | dose independent | rect. | 19 | 3 |
| 608 | 480.49 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 6 | 6 |
| 662 | 481.44 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 679 | 481.67 | temperature | 15.0 | 90 | > th | dose dependent | no | NA | NA |
| 708 | 482.11 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 7 | 1 |
| 732 | 482.63 | wind | 9.0 | 43200 | < th | dose independent | rect. | 19 | 3 |
| 740 | 482.72 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 17 | 5 |
| 763 | 483.08 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 17 | 5 |
| 784 | 483.43 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 797 | 483.54 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |
| 816 | 483.80 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 6 | 15 |
| 817 | 483.82 | temperature | 10.0 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 854 | 484.27 | humidity | 60.0 | 14400 | < th | dose dependent | rect. | 17 | 2 |
| 903 | 484.75 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 922 | 484.92 | humidity | 50.0 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 926 | 484.96 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 927 | 484.96 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 940 | 485.09 | temperature | 30.0 | 4320 | < th | dose dependent | rect. | 18 | 1 |