Os02g0794300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF566 family protein.
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Os02g0794300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF566 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 53.73 | 0.344 | 7.96 | 1.79 | 1.18 | -0.0506 | -0.243 | 1.55 | 0.858 | 3.69 | 21.72 | 3380 | -- | -- |
| 56.93 | 0.351 | 8.02 | 1.58 | 1.19 | -0.369 | -0.187 | -- | 0.812 | 3.6 | 18.8 | 19770 | -- | -- |
| 53.91 | 0.342 | 7.96 | 1.79 | 1.18 | -0.0485 | -- | 1.55 | 0.859 | 3.7 | 21.71 | 3379 | -- | -- |
| 56.34 | 0.35 | 8.03 | 1.58 | 1.17 | -0.39 | -- | -- | 0.759 | 3.71 | 15.1 | 41981 | -- | -- |
| 126.69 | 0.527 | 8.01 | 1.57 | -- | -0.321 | -- | 0.614 | 0.85 | -- | 21.71 | 3379 | -- | -- |
| 58.88 | 0.36 | 8.04 | 1.26 | 1.18 | -- | -0.236 | -- | 0.694 | 3.71 | -- | -- | -- | -- |
| 59.04 | 0.36 | 8.04 | 1.27 | 1.18 | -- | -- | -- | 0.695 | 3.71 | -- | -- | -- | -- |
| 129.06 | 0.531 | 8.02 | 1.41 | -- | -0.33 | -- | -- | 0.814 | -- | 21.71 | 3379 | -- | -- |
| 71.04 | 0.393 | 8.11 | -- | 1.15 | 0.816 | -- | -- | 0.333 | 3.82 | 21.7 | 47520 | -- | -- |
| 135.71 | 0.544 | 8.04 | 1.31 | -- | -- | -- | -- | 0.727 | -- | -- | -- | -- | -- |
| 101.23 | 0.471 | 8.07 | -- | 1.2 | -- | -- | -- | 0.554 | 3.7 | -- | -- | -- | -- |
| 145.6 | 0.562 | 8.14 | -- | -- | 0.875 | -- | -- | 0.276 | -- | 22.01 | 47520 | -- | -- |
| 181.27 | 0.628 | 8.08 | -- | -- | -- | -- | -- | 0.581 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 53.03 | humidity | 80 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 3 | 53.05 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 3 |
| 4 | 53.13 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 5 | 53.16 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 12 |
| 6 | 53.18 | humidity | 80 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 8 | 53.19 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 12 | 53.23 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 36 | 53.32 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 4 | 1 |
| 61 | 53.34 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 4 | 1 |
| 85 | 53.35 | temperature | 20 | 720 | > th | dose independent | rect. | 6 | 1 |
| 106 | 53.36 | atmosphere | 995 | 43200 | > th | dose dependent | sin | 11 | NA |
| 141 | 53.37 | atmosphere | 995 | 43200 | > th | dose dependent | sin | 9 | NA |
| 183 | 53.38 | atmosphere | 1015 | 43200 | < th | dose dependent | sin | 11 | NA |
| 297 | 53.40 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 299 | 53.40 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 18 | 1 |
| 389 | 53.41 | atmosphere | 995 | 43200 | > th | dose dependent | no | NA | NA |
| 448 | 53.41 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 4 | 20 |
| 606 | 53.43 | atmosphere | 1015 | 43200 | < th | dose dependent | no | NA | NA |
| 659 | 53.43 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 4 | 20 |
| 704 | 53.44 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 723 | 53.44 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 11 |
| 744 | 53.44 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 1 | 18 |
| 780 | 53.45 | atmosphere | 995 | 43200 | > th | dose dependent | sin | 2 | NA |
| 784 | 53.45 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 858 | 53.46 | wind | 1 | 14400 | < th | dose dependent | rect. | 2 | 2 |
| 895 | 53.46 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 1 | 18 |
| 956 | 53.47 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 4 | 15 |
| 969 | 53.48 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 977 | 53.48 | atmosphere | 995 | 43200 | > th | dose dependent | rect. | 15 | 1 |
| 979 | 53.48 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 980 | 53.48 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 15 | 1 |