BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0794300 Os02g0794300|J080013L22
(160 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0794300 Protein of unknown function DUF566 family protein 321 2e-88
Os09g0422600 Protein of unknown function DUF566 family protein 167 2e-42
Os03g0762900 Protein of unknown function DUF566 family protein 139 1e-33
Os03g0206100 Protein of unknown function DUF566 family protein 129 7e-31
Os07g0115600 124 3e-29
Os10g0345701 Protein of unknown function DUF566 family protein 73 7e-14
Os09g0286300 Protein of unknown function DUF566 family protein 71 4e-13
Os03g0581500 69 2e-12
>Os02g0794300 Protein of unknown function DUF566 family protein
Length = 160
Score = 321 bits (822), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 160/160 (100%), Positives = 160/160 (100%)
Query: 1 TMLYSVWDANSSLCDSMVMKRSYVQRLRQEVKLGVVLKEQMDYLTHWAALETEHSTSLSS 60
TMLYSVWDANSSLCDSMVMKRSYVQRLRQEVKLGVVLKEQMDYLTHWAALETEHSTSLSS
Sbjct: 1 TMLYSVWDANSSLCDSMVMKRSYVQRLRQEVKLGVVLKEQMDYLTHWAALETEHSTSLSS 60
Query: 61 AIEALRASTLRLPVTGGAKADVFTVKNAVSSAVDIMQAMGSSVCYLLSKLQATHSLVTEL 120
AIEALRASTLRLPVTGGAKADVFTVKNAVSSAVDIMQAMGSSVCYLLSKLQATHSLVTEL
Sbjct: 61 AIEALRASTLRLPVTGGAKADVFTVKNAVSSAVDIMQAMGSSVCYLLSKLQATHSLVTEL 120
Query: 121 SAVAANESSMLNEYRELLGTAAALQVLESSLRTQLIQETE 160
SAVAANESSMLNEYRELLGTAAALQVLESSLRTQLIQETE
Sbjct: 121 SAVAANESSMLNEYRELLGTAAALQVLESSLRTQLIQETE 160
>Os09g0422600 Protein of unknown function DUF566 family protein
Length = 579
Score = 167 bits (424), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 91/157 (57%), Positives = 115/157 (73%)
Query: 1 TMLYSVWDANSSLCDSMVMKRSYVQRLRQEVKLGVVLKEQMDYLTHWAALETEHSTSLSS 60
+++Y+V S+L D + M+R VQ ++QE+KL +LKEQ+DYL W ALE E+S SL
Sbjct: 414 SIIYNVLRNTSNLRDVVNMRRIMVQCIQQELKLHGILKEQIDYLEQWPALEKENSISLFH 473
Query: 61 AIEALRASTLRLPVTGGAKADVFTVKNAVSSAVDIMQAMGSSVCYLLSKLQATHSLVTEL 120
A EAL+ASTLRLPVT GAKADV +KNAVSSAVDIMQ +GS+V +L K++ LV+EL
Sbjct: 474 ATEALKASTLRLPVTSGAKADVVALKNAVSSAVDIMQGLGSAVRCMLPKVEDRTYLVSEL 533
Query: 121 SAVAANESSMLNEYRELLGTAAALQVLESSLRTQLIQ 157
S +A E +ML+E RELL AA LQV ESSLRT L Q
Sbjct: 534 SVIARQEKAMLDECRELLAMAAKLQVQESSLRTHLTQ 570
>Os03g0762900 Protein of unknown function DUF566 family protein
Length = 615
Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 102/157 (64%)
Query: 3 LYSVWDANSSLCDSMVMKRSYVQRLRQEVKLGVVLKEQMDYLTHWAALETEHSTSLSSAI 62
L W + S+ +KR +Q R KL VLK QMD+L W+ LE +H+ SLS +
Sbjct: 451 LSDAWITTLGMRKSVALKRFQLQLFRNNWKLMTVLKGQMDFLEEWSFLERDHANSLSGIV 510
Query: 63 EALRASTLRLPVTGGAKADVFTVKNAVSSAVDIMQAMGSSVCYLLSKLQATHSLVTELSA 122
EAL A+ L LPVT GAKAD+ VKNAV SAVDIMQ +GSS+C LL+KL T LV++L+
Sbjct: 511 EALTATILCLPVTDGAKADIQDVKNAVGSAVDIMQTIGSSICTLLAKLSGTSILVSDLAK 570
Query: 123 VAANESSMLNEYRELLGTAAALQVLESSLRTQLIQET 159
+A E +++++ RELL T A++ V SL+ Q +Q T
Sbjct: 571 IATQERTLMDQSRELLSTLASMHVKYCSLQGQRVQTT 607
>Os03g0206100 Protein of unknown function DUF566 family protein
Length = 589
Score = 129 bits (325), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/158 (48%), Positives = 109/158 (68%)
Query: 3 LYSVWDANSSLCDSMVMKRSYVQRLRQEVKLGVVLKEQMDYLTHWAALETEHSTSLSSAI 62
L+S W S L D++ KRS +Q L+Q++KL +L+ Q+ YL W+ +E HS++LS+AI
Sbjct: 398 LHSAWKEISKLRDNVSSKRSKLQLLKQKLKLFAILRRQIYYLDEWSHIEKHHSSALSAAI 457
Query: 63 EALRASTLRLPVTGGAKADVFTVKNAVSSAVDIMQAMGSSVCYLLSKLQATHSLVTELSA 122
EAL+ASTLRLPV GGAKAD VK AV+SAVD+M M SS+C LLSK++ T S+V+EL+
Sbjct: 458 EALKASTLRLPVVGGAKADAQGVKEAVNSAVDVMHTMASSMCTLLSKVEGTSSVVSELAK 517
Query: 123 VAANESSMLNEYRELLGTAAALQVLESSLRTQLIQETE 160
+A E +L++ R+LL AA+ + S T+ E +
Sbjct: 518 LATQEQMLLDQSRDLLSMVAAIHLASSYATTKAKAEPD 555
>Os07g0115600
Length = 462
Score = 124 bits (311), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/155 (45%), Positives = 99/155 (63%)
Query: 3 LYSVWDANSSLCDSMVMKRSYVQRLRQEVKLGVVLKEQMDYLTHWAALETEHSTSLSSAI 62
L W + + S+ +K+ +Q LRQ K+ LK QM YL W+ LE +++ SLS +
Sbjct: 291 LCGAWVSILGMSKSIALKKLELQLLRQNCKVMNTLKGQMAYLEEWSLLENKYANSLSGTV 350
Query: 63 EALRASTLRLPVTGGAKADVFTVKNAVSSAVDIMQAMGSSVCYLLSKLQATHSLVTELSA 122
EAL A+ LRLPV+ GA AD +VKNAV SAVD+MQ M +S+ YLL KL T+ LV++LS
Sbjct: 351 EALNATVLRLPVSDGAVADFQSVKNAVGSAVDVMQTMRNSMSYLLPKLARTNVLVSQLSI 410
Query: 123 VAANESSMLNEYRELLGTAAALQVLESSLRTQLIQ 157
+ E ++ + RELL T A + V SSL+ Q+IQ
Sbjct: 411 ITRQEQVLMAQCRELLSTLALMHVKYSSLQGQMIQ 445
>Os10g0345701 Protein of unknown function DUF566 family protein
Length = 91
Score = 73.2 bits (178), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%)
Query: 40 QMDYLTHWAALETEHSTSLSSAIEALRASTLRLPVTGGAKADVFTVKNAVSSAVDIMQAM 99
Q+ YL W+ +E HS+S+S AI+AL AST+RLP+ GAKAD VK VSSA+ M M
Sbjct: 3 QISYLEEWSDVENNHSSSMSEAIKALEASTIRLPIVCGAKADAQGVKKVVSSALTKMDTM 62
Query: 100 GSSVCYLLSKLQ 111
SS+ LLSK+
Sbjct: 63 ASSMWSLLSKVH 74
>Os09g0286300 Protein of unknown function DUF566 family protein
Length = 484
Score = 70.9 bits (172), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 81/149 (54%)
Query: 3 LYSVWDANSSLCDSMVMKRSYVQRLRQEVKLGVVLKEQMDYLTHWAALETEHSTSLSSAI 62
L+ + + ++L S+ K+ V+R+R+E L V+ Q+ +L W LE +HS+SL
Sbjct: 335 LFGLEERITALRVSVAEKKMEVERMRREQTLRSVVDAQVPHLDQWCDLEGDHSSSLIGLT 394
Query: 63 EALRASTLRLPVTGGAKADVFTVKNAVSSAVDIMQAMGSSVCYLLSKLQATHSLVTELSA 122
AL S+LRLPV G +A+ + ++S+V +++ + S V L K+Q + +L+
Sbjct: 395 SALYNSSLRLPVIGNVRANSEEITEVLNSSVQLLEPVSSCVKNFLPKVQEVDDVAAKLAQ 454
Query: 123 VAANESSMLNEYRELLGTAAALQVLESSL 151
V A+E + E LL A LQ ++ L
Sbjct: 455 VIASERVAIEECGNLLYQAHNLQKIQRRL 483
>Os03g0581500
Length = 525
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%)
Query: 3 LYSVWDANSSLCDSMVMKRSYVQRLRQEVKLGVVLKEQMDYLTHWAALETEHSTSLSSAI 62
W S L + +R +++ + ++KL VL QM L W LE++H+ +L S +
Sbjct: 344 FMGAWARISELQGKVARRRVQLEKEKLKIKLNSVLSSQMRGLESWGQLESKHAVALDSTV 403
Query: 63 EALRASTLRLPVTGGAKADVFTVKNAVSSAVDIMQAMGSSVCYLLSKLQATHSLVTELSA 122
+A+ +LP+T GAK + ++ + A+D+ + V T L+TEL A
Sbjct: 404 VCTQAAICKLPLTNGAKISLPSMGIILQQALDLTMTTKTIVRSFTPMAHDTTLLITELVA 463
Query: 123 VAANESSMLNEYRELLGTAAALQVL 147
VA E ++L E ELLG +ALQ +
Sbjct: 464 VAREEHALLQECLELLGRVSALQTI 488
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.122 0.324
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,910,518
Number of extensions: 112405
Number of successful extensions: 418
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 418
Number of HSP's successfully gapped: 9
Length of query: 160
Length of database: 17,035,801
Length adjustment: 93
Effective length of query: 67
Effective length of database: 12,179,899
Effective search space: 816053233
Effective search space used: 816053233
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 152 (63.2 bits)