BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0794300 Os02g0794300|J080013L22
(160 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G30710.1 | chr4:14965538-14967881 REVERSE LENGTH=645 140 3e-34
AT5G43160.1 | chr5:17329275-17330736 FORWARD LENGTH=262 134 3e-32
AT2G24070.1 | chr2:10231822-10233986 REVERSE LENGTH=610 130 4e-31
AT3G19570.2 | chr3:6797778-6801344 FORWARD LENGTH=645 125 7e-30
AT1G49890.1 | chr1:18470282-18473463 FORWARD LENGTH=660 105 1e-23
AT3G60000.2 | chr3:22160930-22162768 FORWARD LENGTH=452 80 4e-16
AT2G44190.1 | chr2:18272346-18274332 FORWARD LENGTH=475 66 6e-12
AT4G25190.2 | chr4:12914400-12916001 REVERSE LENGTH=396 65 2e-11
AT2G20815.1 | chr2:8959988-8961917 FORWARD LENGTH=483 55 1e-08
>AT4G30710.1 | chr4:14965538-14967881 REVERSE LENGTH=645
Length = 644
Score = 140 bits (353), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 77/155 (49%), Positives = 106/155 (68%)
Query: 3 LYSVWDANSSLCDSMVMKRSYVQRLRQEVKLGVVLKEQMDYLTHWAALETEHSTSLSSAI 62
L++VW A S L D + +R +Q+L+ E+KL +L +QM L WA LE +H +SL AI
Sbjct: 466 LFNVWHAISELQDHVTRQRIGLQQLKLEIKLNSLLNDQMVSLEDWATLERDHVSSLVGAI 525
Query: 63 EALRASTLRLPVTGGAKADVFTVKNAVSSAVDIMQAMGSSVCYLLSKLQATHSLVTELSA 122
L A+TLRLP TGG KAD ++K A+SSA+D+MQAMGSS+ LLSK++ + +VTEL+
Sbjct: 526 SDLEANTLRLPATGGTKADTESLKAAMSSALDVMQAMGSSIWSLLSKVEEMNIMVTELAV 585
Query: 123 VAANESSMLNEYRELLGTAAALQVLESSLRTQLIQ 157
V ESSM + +LL + A +Q+ E SLRT LIQ
Sbjct: 586 VVTKESSMQGKCEDLLASTAIMQIEECSLRTHLIQ 620
>AT5G43160.1 | chr5:17329275-17330736 FORWARD LENGTH=262
Length = 261
Score = 134 bits (336), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 100/155 (64%)
Query: 3 LYSVWDANSSLCDSMVMKRSYVQRLRQEVKLGVVLKEQMDYLTHWAALETEHSTSLSSAI 62
LY+ W + S+L +S+ MKR +Q L+Q +KL +L QM +L W ++ + SL A
Sbjct: 105 LYNAWRSISNLYNSVSMKRIEMQHLKQNLKLISILNMQMGHLEEWLVIDRNYMGSLVGAA 164
Query: 63 EALRASTLRLPVTGGAKADVFTVKNAVSSAVDIMQAMGSSVCYLLSKLQATHSLVTELSA 122
EAL+ STL LPV GA +V +VK+A+ SAVD+MQAM SS+C LL K+ SL EL
Sbjct: 165 EALKGSTLCLPVDCGAMVNVQSVKDAICSAVDVMQAMASSICLLLPKVGKISSLAAELGR 224
Query: 123 VAANESSMLNEYRELLGTAAALQVLESSLRTQLIQ 157
V A + ML+ R+LL T +ALQV E SLRTQ+ Q
Sbjct: 225 VNAKDEGMLDVCRDLLNTISALQVTECSLRTQVTQ 259
>AT2G24070.1 | chr2:10231822-10233986 REVERSE LENGTH=610
Length = 609
Score = 130 bits (326), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 69/158 (43%), Positives = 110/158 (69%)
Query: 3 LYSVWDANSSLCDSMVMKRSYVQRLRQEVKLGVVLKEQMDYLTHWAALETEHSTSLSSAI 62
LY+VW A S L D + +R +Q+L+ E+KL +L +QM L WA +E EH +SL+ AI
Sbjct: 430 LYNVWHAISDLRDLVTTQRICLQQLKLEIKLRSILNDQMVCLEDWAMVEREHISSLAGAI 489
Query: 63 EALRASTLRLPVTGGAKADVFTVKNAVSSAVDIMQAMGSSVCYLLSKLQATHSLVTELSA 122
L A+TLRLP+ GG KAD+ ++K A+SSA+D+MQ+MGSS+ L S+++ + LV++L+
Sbjct: 490 GDLEANTLRLPLAGGTKADLGSLKLAMSSALDVMQSMGSSIWSLHSQMEEMNKLVSDLAV 549
Query: 123 VAANESSMLNEYRELLGTAAALQVLESSLRTQLIQETE 160
+A E+ +L++ LL + A +++ E SL+T LIQ+ +
Sbjct: 550 IAKTENFLLDKCENLLASTAVMEIEERSLKTHLIQKKQ 587
>AT3G19570.2 | chr3:6797778-6801344 FORWARD LENGTH=645
Length = 644
Score = 125 bits (315), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 104/156 (66%)
Query: 2 MLYSVWDANSSLCDSMVMKRSYVQRLRQEVKLGVVLKEQMDYLTHWAALETEHSTSLSSA 61
+L++ W + S L S+ +KR + +RQ++KL +LKEQM YL W+ L+ HS SLS A
Sbjct: 485 ILWNAWVSISELRHSVTLKRIKLLLMRQKLKLASILKEQMCYLEEWSLLDRNHSNSLSGA 544
Query: 62 IEALRASTLRLPVTGGAKADVFTVKNAVSSAVDIMQAMGSSVCYLLSKLQATHSLVTELS 121
EAL+ASTLRLPV+G A D+ +K+AVSSAVD+M AM SS+ L SK++ +S++ E+
Sbjct: 545 TEALKASTLRLPVSGKAVVDIQDLKHAVSSAVDVMHAMVSSIFSLTSKVEEMNSVMAEMV 604
Query: 122 AVAANESSMLNEYRELLGTAAALQVLESSLRTQLIQ 157
+ E +L + + L AA+QV + S++T +IQ
Sbjct: 605 NITGKEEVLLEQCQGFLTRVAAMQVTDCSMKTHIIQ 640
>AT1G49890.1 | chr1:18470282-18473463 FORWARD LENGTH=660
Length = 659
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/122 (45%), Positives = 81/122 (66%)
Query: 36 VLKEQMDYLTHWAALETEHSTSLSSAIEALRASTLRLPVTGGAKADVFTVKNAVSSAVDI 95
+L+ QM +L W+ L+ +HS+SLS A E+L+ASTLRLP+ G D+ +K+AVSSAVD+
Sbjct: 524 ILRGQMGFLEEWSLLDRDHSSSLSGATESLKASTLRLPIVGKTVVDIQDLKHAVSSAVDV 583
Query: 96 MQAMGSSVCYLLSKLQATHSLVTELSAVAANESSMLNEYRELLGTAAALQVLESSLRTQL 155
MQAM SS+ L SK+ +S++ E V A E +L + L AA+QV + S++T +
Sbjct: 584 MQAMSSSIFSLTSKVDEMNSVMVETVNVTAKEKVLLERCQGCLSRVAAMQVTDCSMKTHI 643
Query: 156 IQ 157
IQ
Sbjct: 644 IQ 645
>AT3G60000.2 | chr3:22160930-22162768 FORWARD LENGTH=452
Length = 451
Score = 80.1 bits (196), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 91/160 (56%), Gaps = 2/160 (1%)
Query: 1 TMLYSVWDANSSLCDSMVMKRSYVQRLRQEVKLGVVLKEQMDYLTHWAALETEHSTSLSS 60
TM++S S L DS+ KR +QRL + L + + Q L W+A+E E+STS+S
Sbjct: 285 TMIHSFGSKISELHDSVQRKRIELQRLLKTKALLAITESQTPCLEQWSAIEEEYSTSVSQ 344
Query: 61 AIEALRASTLRLPVTGGAKADVFTVKNAVSSAVDIMQAMGSSVCYLLSKLQATHSLVTEL 120
I+A ++LRLP+ G D + + + +A I+ + +V + K + SL++EL
Sbjct: 345 TIQAFSNASLRLPLDGDIMVDSKQLGDGLVAASKIVDGITQNVGNYMPKAKEMESLLSEL 404
Query: 121 SAVAANESSML-NEYRELLGTAAALQVLESSLRTQLIQET 159
+ VA +E S+ N LL T A+ Q+ E S+R+QLIQ+T
Sbjct: 405 TRVARSERSLTENCVVALLKTQAS-QIEECSMRSQLIQQT 443
>AT2G44190.1 | chr2:18272346-18274332 FORWARD LENGTH=475
Length = 474
Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/156 (32%), Positives = 82/156 (52%)
Query: 2 MLYSVWDANSSLCDSMVMKRSYVQRLRQEVKLGVVLKEQMDYLTHWAALETEHSTSLSSA 61
M YS+ S L DS+ KR +Q L++ + +++ Q L WA LE E STSL
Sbjct: 305 MFYSLGLKMSELSDSVQRKRIELQHLQRVKAVTEIVESQTPSLEQWAVLEDEFSTSLLET 364
Query: 62 IEALRASTLRLPVTGGAKADVFTVKNAVSSAVDIMQAMGSSVCYLLSKLQATHSLVTELS 121
EAL ++LRLP+ K + + A+ A M+ + ++ L+ K Q +L++EL+
Sbjct: 365 TEALLNASLRLPLDSKIKVETKELAEALVVASKSMEGIVQNIGNLVPKTQEMETLMSELA 424
Query: 122 AVAANESSMLNEYRELLGTAAALQVLESSLRTQLIQ 157
V+ E + + + R L + Q+ E LR+QLIQ
Sbjct: 425 RVSGIEKASVEDCRVALLKTHSSQMEECYLRSQLIQ 460
>AT4G25190.2 | chr4:12914400-12916001 REVERSE LENGTH=396
Length = 395
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 1/159 (0%)
Query: 3 LYSVWDANSSLCDSMVMKRSYVQRLRQEVKLGVVLKEQMDYLTHWAALETEHSTSLSSAI 62
L+ VW + + +V +QRLRQ++K+ VL QM L W+ ++ ++S +LS
Sbjct: 234 LFWVWLRIYKMRNYVVENLIEIQRLRQDIKVREVLSLQMPLLNEWSKIDAKNSEALSKLT 293
Query: 63 EALRASTLRLPVTGGAKADVFTVKNAVSSAVDIMQAMGSSVC-YLLSKLQATHSLVTELS 121
L A ++RLP+ GA D+ ++ + A+++M + + +L +++ +TEL
Sbjct: 294 RKLHALSVRLPLVHGATIDMVSIHEEMVIAIEVMDEIEDVIIKFLPRQVEIILYELTELI 353
Query: 122 AVAANESSMLNEYRELLGTAAALQVLESSLRTQLIQETE 160
+ E E E L + ESSLR ++Q+TE
Sbjct: 354 GMFNQELLYFEEMDESLLSIPLFTAKESSLRVHILQKTE 392
>AT2G20815.1 | chr2:8959988-8961917 FORWARD LENGTH=483
Length = 482
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 77/152 (50%)
Query: 1 TMLYSVWDANSSLCDSMVMKRSYVQRLRQEVKLGVVLKEQMDYLTHWAALETEHSTSLSS 60
L WD L + ++ +R +Q+ E+KL V Q+ +L W +E +H +SLS
Sbjct: 313 NQLLCAWDTLIKLNNLVLQERIKLQKKNLEMKLNYVFLSQVKHLEAWEDMEIQHLSSLSI 372
Query: 61 AIEALRASTLRLPVTGGAKADVFTVKNAVSSAVDIMQAMGSSVCYLLSKLQATHSLVTEL 120
++L + RLP+ GAK ++ + + + +A + A+ S+V ++ L ++L
Sbjct: 373 IRDSLHSVLSRLPLKEGAKVNLESAVSIIKNAEAVTDAIISTVDDYAPTMEGIVPLASQL 432
Query: 121 SAVAANESSMLNEYRELLGTAAALQVLESSLR 152
+ V E ML + +LL + L++ E SL+
Sbjct: 433 AEVVVQEKLMLEKCHDLLRMISELEMQERSLK 464
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.314 0.122 0.324
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,537,256
Number of extensions: 74875
Number of successful extensions: 269
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 268
Number of HSP's successfully gapped: 9
Length of query: 160
Length of database: 11,106,569
Length adjustment: 91
Effective length of query: 69
Effective length of database: 8,611,713
Effective search space: 594208197
Effective search space used: 594208197
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 107 (45.8 bits)