BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os03g0120100 Os03g0120100|AK110743
(340 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os03g0120100 Protein of unknown function DUF284, transmembr... 674 0.0
Os05g0529900 Protein of unknown function DUF284, transmembr... 492 e-139
Os02g0173800 Protein of unknown function DUF284, transmembr... 426 e-119
Os06g0665000 Protein of unknown function DUF284, transmembr... 416 e-117
Os03g0785500 Protein of unknown function DUF284, transmembr... 365 e-101
Os09g0560600 Protein of unknown function DUF284, transmembr... 359 2e-99
>Os03g0120100 Protein of unknown function DUF284, transmembrane eukaryotic family
protein
Length = 340
Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/340 (96%), Positives = 328/340 (96%)
Query: 1 MDPLESEGGSQKSNNKPKYSKFTQQELPACKPLLTPGIVVATFLLIGIIFVPIGLASLSA 60
MDPLESEGGSQKSNNKPKYSKFTQQELPACKPLLTPGIVVATFLLIGIIFVPIGLASLSA
Sbjct: 1 MDPLESEGGSQKSNNKPKYSKFTQQELPACKPLLTPGIVVATFLLIGIIFVPIGLASLSA 60
Query: 61 SQEIVELVDRYDTNCVSTLDKVGFIQNXXXXXXXXXXXXVPKHMKSPIQIYYQIGDFYQN 120
SQEIVELVDRYDTNCVSTLDKVGFIQN VPKHMKSPIQIYYQIGDFYQN
Sbjct: 61 SQEIVELVDRYDTNCVSTLDKVGFIQNTDTDKTCTRTLTVPKHMKSPIQIYYQIGDFYQN 120
Query: 121 HRRYVKSRSDKQLRYKNAVHLTKDCDPEGNTVDGAPIIPCGLIAWSLFNDTYTISVNKKA 180
HRRYVKSRSDKQLRYKNAVHLTKDCDPEGNTVDGAPIIPCGLIAWSLFNDTYTISVNKKA
Sbjct: 121 HRRYVKSRSDKQLRYKNAVHLTKDCDPEGNTVDGAPIIPCGLIAWSLFNDTYTISVNKKA 180
Query: 181 IEVNKKDIAWKSDKTDKFGSDIYPSNFQKGSLIGGAKLNESIPLSEQEDLIVWMRTAALP 240
IEVNKKDIAWKSDKTDKFGSDIYPSNFQKGSLIGGAKLNESIPLSEQEDLIVWMRTAALP
Sbjct: 181 IEVNKKDIAWKSDKTDKFGSDIYPSNFQKGSLIGGAKLNESIPLSEQEDLIVWMRTAALP 240
Query: 241 TFRKLYGRIETDIMANDQLTVVIQNNYNTYSFGGSKALVLSTTSWIGGKNNFIGVAYLTI 300
TFRKLYGRIETDIMANDQLTVVIQNNYNTYSFGGSKALVLSTTSWIGGKNNFIGVAYLTI
Sbjct: 241 TFRKLYGRIETDIMANDQLTVVIQNNYNTYSFGGSKALVLSTTSWIGGKNNFIGVAYLTI 300
Query: 301 GGLCIFLAVGFVVLLYMVKPRTLGDPSYLSWNRDTPDRPN 340
GGLCIFLAVGFVVLLYMVKPRTLGDPSYLSWNRDTPDRPN
Sbjct: 301 GGLCIFLAVGFVVLLYMVKPRTLGDPSYLSWNRDTPDRPN 340
>Os05g0529900 Protein of unknown function DUF284, transmembrane eukaryotic family
protein
Length = 325
Score = 492 bits (1267), Expect = e-139, Method: Compositional matrix adjust.
Identities = 234/322 (72%), Positives = 267/322 (82%), Gaps = 1/322 (0%)
Query: 16 KPKYSKFTQQELPACKPLLTPGIVVATFLLIGIIFVPIGLASLSASQEIVELVDRYDTNC 75
KPKYSKFTQQELPA KPL TPGIV+ F LIGIIF+PIGL S++ASQE+VELVD+YD C
Sbjct: 2 KPKYSKFTQQELPAWKPLYTPGIVIGAFSLIGIIFIPIGLVSIAASQEVVELVDKYDGEC 61
Query: 76 VSTLDKVGFIQNXXXXXXXXXXXXVPKHMKSPIQIYYQIGDFYQNHRRYVKSRSDKQLRY 135
V+ DKVGFIQ+ VPK MK PIQ+YYQ+ +FYQNHRRYVKSRSDKQLR
Sbjct: 62 VTANDKVGFIQDTKTDKACTRTITVPKPMKGPIQVYYQLENFYQNHRRYVKSRSDKQLRS 121
Query: 136 KNAVHLTKDCDPEGNTVDGAPIIPCGLIAWSLFNDTYTISVNKKAIEVNKKDIAWKSDKT 195
K + K CDPE + GAPI+PCGLIAWSLFNDT+T SVNKK ++VNKK+IAW SD+T
Sbjct: 122 KEFSSVIKTCDPEAISEGGAPIVPCGLIAWSLFNDTFTFSVNKKTVQVNKKNIAWSSDRT 181
Query: 196 DKFGSDIYPSNFQKGSLIGGAKLNESIPLSEQEDLIVWMRTAALPTFRKLYGRIETDIMA 255
KFGSD++P NFQKG LIGG +LNE +PLSEQEDLIVWMRTAALPTFRKLYGRIETDIMA
Sbjct: 182 IKFGSDVFPENFQKGGLIGGGQLNEKLPLSEQEDLIVWMRTAALPTFRKLYGRIETDIMA 241
Query: 256 NDQLTVVIQNNYNTYSFGGSKALVLSTTSWIGGKNNFIGVAYLTIGGLCIFLAVGFVVLL 315
+D++TVVIQNNYNTYSFGG+KALVLSTTSWIGGKNNFIG AY+ IG + +A+ FV L
Sbjct: 242 SDEITVVIQNNYNTYSFGGTKALVLSTTSWIGGKNNFIGFAYVAIGTISFLIALAFVG-L 300
Query: 316 YMVKPRTLGDPSYLSWNRDTPD 337
MVKPRTLGDPSYLSWN++ PD
Sbjct: 301 NMVKPRTLGDPSYLSWNKENPD 322
>Os02g0173800 Protein of unknown function DUF284, transmembrane eukaryotic family
protein
Length = 350
Score = 426 bits (1094), Expect = e-119, Method: Compositional matrix adjust.
Identities = 201/330 (60%), Positives = 252/330 (76%), Gaps = 4/330 (1%)
Query: 11 QKSNNKPKYSKFTQQELPACKPLLTPGIVVATFLLIGIIFVPIGLASLSASQEIVELVDR 70
+++ KPKYSKFTQQELPACKP+LTP V++ F+L+G+IFVPIGL SL AS+++VE+VDR
Sbjct: 23 RRNTRKPKYSKFTQQELPACKPILTPKWVISVFVLVGVIFVPIGLVSLKASRKVVEIVDR 82
Query: 71 YDTNCV--STLDKVGFIQNXXXXXXXXXXXXVPKHMKSPIQIYYQIGDFYQNHRRYVKSR 128
YD CV +T DK+ +IQN VPK M +PI +YYQ+ +FYQNHRRYVKSR
Sbjct: 83 YDDACVPANTTDKLAYIQNPTISKNCRRTLKVPKDMDAPIFVYYQLDNFYQNHRRYVKSR 142
Query: 129 SDKQLRYKNAVHLTKDCDPEGNTVDGAPIIPCGLIAWSLFNDTYTISVNKKAIEVNKKDI 188
SD QLR + T CDPEG T +G I+PCGLIAWS+FNDTY N K + V+KK+I
Sbjct: 143 SDAQLRDPKKANDTSTCDPEG-TANGMAIVPCGLIAWSIFNDTYGFVRNSKNLPVDKKNI 201
Query: 189 AWKSDKTDKFGSDIYPSNFQKGSLIGGAKLNESIPLSEQEDLIVWMRTAALPTFRKLYGR 248
+WKSD+ KFG D++P NFQ GSLIGG L+ + LS+QEDLIVWMRTAALPTFRKLYGR
Sbjct: 202 SWKSDREHKFGRDVFPKNFQNGSLIGGKTLDPNKSLSKQEDLIVWMRTAALPTFRKLYGR 261
Query: 249 IETDIMANDQLTVVIQNNYNTYSFGGSKALVLSTTSWIGGKNNFIGVAYLTIGGLCIFLA 308
I TD+ D +TV ++NNYNTYSF G K LVLST++W+GGKN+F+G+AYL++GGLC FLA
Sbjct: 262 IHTDLKKGDTITVTLENNYNTYSFSGKKKLVLSTSTWLGGKNDFLGLAYLSVGGLCFFLA 321
Query: 309 VGFVVLLYMVKPRTLGDPSYLSWNRDTPDR 338
F LLY++KPR +GD +YLSWNR+ R
Sbjct: 322 FAF-TLLYLIKPRKMGDNNYLSWNRNPAGR 350
>Os06g0665000 Protein of unknown function DUF284, transmembrane eukaryotic family
protein
Length = 358
Score = 416 bits (1070), Expect = e-117, Method: Compositional matrix adjust.
Identities = 195/333 (58%), Positives = 245/333 (73%), Gaps = 4/333 (1%)
Query: 9 GSQKSNNKPKYSKFTQQELPACKPLLTPGIVVATFLLIGIIFVPIGLASLSASQEIVELV 68
++++ PKYSKFTQQELPACKP+LTP VV+ F L+G+IFVP+G+ SL A+Q +VE+V
Sbjct: 27 AARRNTKMPKYSKFTQQELPACKPILTPKWVVSVFFLVGVIFVPVGVVSLLAAQNVVEIV 86
Query: 69 DRYDTNCVS---TLDKVGFIQNXXXXXXXXXXXXVPKHMKSPIQIYYQIGDFYQNHRRYV 125
DRYD CV T +K+ +IQN + + M PI +YYQ+ +FYQNHRRYV
Sbjct: 87 DRYDDACVPANMTDNKLAYIQNPNISKECTRTLTITEDMNQPIFVYYQLDNFYQNHRRYV 146
Query: 126 KSRSDKQLRYKNAVHLTKDCDPEGNTVDGAPIIPCGLIAWSLFNDTYTISVNKKAIEVNK 185
KSR+D QLR + T C+PE T DG PI+PCGLIAWSLFNDTY+ + + + V+K
Sbjct: 147 KSRNDGQLRDAAKANQTSACEPEKTTADGKPIVPCGLIAWSLFNDTYSFTRGNENLTVDK 206
Query: 186 KDIAWKSDKTDKFGSDIYPSNFQKGSLIGGAKLNESIPLSEQEDLIVWMRTAALPTFRKL 245
KDI+WKSD+ KFG ++YPSNFQ G L GG L+ +IPLSEQEDLIVWMRTAALPTFRKL
Sbjct: 207 KDISWKSDREHKFGKNVYPSNFQNGLLKGGGTLDPAIPLSEQEDLIVWMRTAALPTFRKL 266
Query: 246 YGRIETDIMANDQLTVVIQNNYNTYSFGGSKALVLSTTSWIGGKNNFIGVAYLTIGGLCI 305
YGRI D+ ND +TV + NNYNTY+FGG K LVLST +W+GGKN+F+G AY+ +GG+C
Sbjct: 267 YGRIYVDLKKNDTITVKLSNNYNTYNFGGKKKLVLSTATWLGGKNDFLGFAYVIVGGVCF 326
Query: 306 FLAVGFVVLLYMVKPRTLGDPSYLSWNRDTPDR 338
FLA F LLY++KPR LGD +YLSWNR R
Sbjct: 327 FLAFAF-TLLYLIKPRKLGDHNYLSWNRHPGGR 358
>Os03g0785500 Protein of unknown function DUF284, transmembrane eukaryotic family
protein
Length = 351
Score = 365 bits (936), Expect = e-101, Method: Compositional matrix adjust.
Identities = 174/319 (54%), Positives = 228/319 (71%), Gaps = 8/319 (2%)
Query: 19 YSKFTQQELPACKPLLTPGIVVATFLLIGIIFVPIGLASLSASQEIVELVDRYDTNCVST 78
+ +FTQQ LPA KP +TPG V+ FL+IG+ FVP+GL L AS + E+ RYD +CV
Sbjct: 32 FYRFTQQNLPAWKPAMTPGCVITIFLMIGVTFVPVGLVCLHASNHVAEIAHRYDIDCVPN 91
Query: 79 L---DKVGFIQNXXXXXXXXXXXXVPKHMKSPIQIYYQIGDFYQNHRRYVKSRSDKQLRY 135
++ +I++ V M++PI +YY++ +FYQNHRRYVKSRSDKQLRY
Sbjct: 92 AYKRNRQAYIKDSSISKNCTQEVKVKYLMRAPIYVYYELDNFYQNHRRYVKSRSDKQLRY 151
Query: 136 KNAVHLTKDCDP-EGNTVDGAPIIPCGLIAWSLFNDTYTISVNKKAIEVNKKDIAWKSDK 194
+ CDP E N DG PI+PCGLIAWSLFNDTY + I+VN+K+I+WKSD+
Sbjct: 152 GQK-YTHSSCDPIERN--DGLPIVPCGLIAWSLFNDTYGFTCGSTEIKVNRKNISWKSDR 208
Query: 195 TDKFGSDIYPSNFQKGSLIGGAKLNESIPLSEQEDLIVWMRTAALPTFRKLYGRIETDIM 254
KFG D+YP NFQ GSLIGG KL+ ++PL++QEDLIVWMRTAALP FRKLYG IE D+
Sbjct: 209 EHKFGKDVYPFNFQNGSLIGGGKLDPALPLNQQEDLIVWMRTAALPQFRKLYGVIEEDLQ 268
Query: 255 ANDQLTVVIQNNYNTYSFGGSKALVLSTTSWIGGKNNFIGVAYLTIGGLCIFLAVGFVVL 314
A++ +T+ I NNYNTYSFGG K+L+L+T++W+GGKN+F+G AYL G L +FL + F L
Sbjct: 269 ADEIITMHIANNYNTYSFGGKKSLILTTSTWLGGKNDFLGYAYLITGSLSLFLTILF-AL 327
Query: 315 LYMVKPRTLGDPSYLSWNR 333
+++ PR GD +YLSWNR
Sbjct: 328 IHVKNPRPHGDANYLSWNR 346
>Os09g0560600 Protein of unknown function DUF284, transmembrane eukaryotic family
protein
Length = 351
Score = 359 bits (921), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 175/307 (57%), Positives = 215/307 (70%), Gaps = 9/307 (2%)
Query: 3 PLESEGGSQ---KSNNKPKYSKFTQQELPACKPLLTPGIVVATFLLIGIIFVPIGLASLS 59
P E GS K N+PKY +FTQQEL ACKP+L P V+ + +G+IF+PIGLA ++
Sbjct: 11 PSSGEDGSAAAVKKRNRPKYHRFTQQELQACKPILIPQTVILVLVFVGLIFIPIGLACIA 70
Query: 60 ASQEIVELVDRYDTNCVST---LDKVGFIQNXXXXXXXXXXXXVPKHMKSPIQIYYQIGD 116
AS ++VELVDRYDT CV +KV FIQN VPK MK PI IYYQ+
Sbjct: 71 ASNKVVELVDRYDTKCVPRNMLRNKVAFIQNSSIDKTCTRVFKVPKDMKKPIYIYYQLDK 130
Query: 117 FYQNHRRYVKSRSDKQLRYKNAVHLTKDCDPEGNTVDGAPIIPCGLIAWSLFNDTYTISV 176
FYQNHRRYVKS +D QLR V T+ C PE T +G PI+PCGLIAWSLFNDTY+ +
Sbjct: 131 FYQNHRRYVKSLNDMQLRNPKKVADTQYCSPEA-TANGRPIVPCGLIAWSLFNDTYSFTR 189
Query: 177 NK--KAIEVNKKDIAWKSDKTDKFGSDIYPSNFQKGSLIGGAKLNESIPLSEQEDLIVWM 234
+ + VNK I+WKS++ +FG ++YP NFQ G+LIGG +LN S PLSEQEDLIVWM
Sbjct: 190 GHGNETLRVNKDGISWKSERNRRFGKNVYPKNFQNGTLIGGGQLNPSKPLSEQEDLIVWM 249
Query: 235 RTAALPTFRKLYGRIETDIMANDQLTVVIQNNYNTYSFGGSKALVLSTTSWIGGKNNFIG 294
R AALPTFRKLYGRI+ D+ A D++ V +QNNYN+YSF G K+LVLST W+GGKN F+G
Sbjct: 250 RIAALPTFRKLYGRIDMDLQAGDRVEVTMQNNYNSYSFNGKKSLVLSTAGWLGGKNAFLG 309
Query: 295 VAYLTIG 301
AY +G
Sbjct: 310 RAYAIVG 316
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.137 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 11,421,183
Number of extensions: 449716
Number of successful extensions: 877
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 865
Number of HSP's successfully gapped: 6
Length of query: 340
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 238
Effective length of database: 11,709,973
Effective search space: 2786973574
Effective search space used: 2786973574
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)