BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0787100 Os02g0787100|Os02g0787100
(432 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0787100 Protein of unknown function DUF676, hydrolase-... 682 0.0
Os03g0726800 Protein of unknown function DUF676, hydrolase-... 280 1e-75
Os08g0143700 Protein of unknown function DUF676, hydrolase-... 267 1e-71
Os08g0447300 Protein of unknown function DUF676, hydrolase-... 184 1e-46
Os02g0655600 Protein of unknown function DUF676, hydrolase-... 85 1e-16
>Os02g0787100 Protein of unknown function DUF676, hydrolase-like domain
containing protein
Length = 432
Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/351 (94%), Positives = 331/351 (94%)
Query: 82 KARTRSGGGKLDLANWLRCFVAPPLPQPSEAEASXXXXXXXXXXXXXXXXXXXXHLVVMV 141
KARTRSGGGKLDLANWLRCFVAPPLPQPSEAEAS HLVVMV
Sbjct: 82 KARTRSGGGKLDLANWLRCFVAPPLPQPSEAEASAEGRDAGNREEEEAGNEEADHLVVMV 141
Query: 142 NGLYGSSADWKFAAEQFVKRLPGKVFVHRSQCNHSKLTYDGVDLMGERLAEEVRQVVQRR 201
NGLYGSSADWKFAAEQFVKRLPGKVFVHRSQCNHSKLTYDGVDLMGERLAEEVRQVVQRR
Sbjct: 142 NGLYGSSADWKFAAEQFVKRLPGKVFVHRSQCNHSKLTYDGVDLMGERLAEEVRQVVQRR 201
Query: 202 SNLQKISFVAHSLGGLVTRYAIGKLYDPSINEEASLDKENFSNELRTSDGGKIAGLEPIN 261
SNLQKISFVAHSLGGLVTRYAIGKLYDPSINEEASLDKENFSNELRTSDGGKIAGLEPIN
Sbjct: 202 SNLQKISFVAHSLGGLVTRYAIGKLYDPSINEEASLDKENFSNELRTSDGGKIAGLEPIN 261
Query: 262 FIAVATPHLGSRWNKQLPFLFGVPLLERTAAVTAHFIVGRTGKHLFLTDSDDGKPPLLLR 321
FIAVATPHLGSRWNKQLPFLFGVPLLERTAAVTAHFIVGRTGKHLFLTDSDDGKPPLLLR
Sbjct: 262 FIAVATPHLGSRWNKQLPFLFGVPLLERTAAVTAHFIVGRTGKHLFLTDSDDGKPPLLLR 321
Query: 322 MAEDCDDGKFMSALRSFKRRVAYANLQLTPSDKKYPHIIHVDKGNSEHHQQEESVEASLT 381
MAEDCDDGKFMSALRSFKRRVAYANLQLTPSDKKYPHIIHVDKGNSEHHQQEESVEASLT
Sbjct: 322 MAEDCDDGKFMSALRSFKRRVAYANLQLTPSDKKYPHIIHVDKGNSEHHQQEESVEASLT 381
Query: 382 DSMEEVMIHGLTQVPWERVDVCFHKSWLRYNAHHNIQILFVKHNLRLITDQ 432
DSMEEVMIHGLTQVPWERVDVCFHKSWLRYNAHHNIQILFVKHNLRLITDQ
Sbjct: 382 DSMEEVMIHGLTQVPWERVDVCFHKSWLRYNAHHNIQILFVKHNLRLITDQ 432
>Os03g0726800 Protein of unknown function DUF676, hydrolase-like domain
containing protein
Length = 386
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/311 (49%), Positives = 200/311 (64%), Gaps = 28/311 (9%)
Query: 136 HLVVMVNGLYGSSADWKFAAEQFVKRLPGKVFVHRSQCNHSKLTYDGVDLMGERLAEEVR 195
HLVV VNG+ GS+ +W++AA+ F+K+ P V VH S CN + T+DGVD+MG RLAEEV
Sbjct: 55 HLVVTVNGIVGSAENWRYAAKHFIKKHPEDVVVHCSGCNGAVRTFDGVDVMGTRLAEEVL 114
Query: 196 QVVQRRSNLQKISFVAHSLGGLVTRYAIGKLYDPSINEEASLDKENFSNELRTS---DGG 252
+VQRR LQKISFVAHSLGGL+ RYAI LY + ++ + E ++ ++ D G
Sbjct: 115 SLVQRRPELQKISFVAHSLGGLIARYAIALLYKSATEIDSHEEHEKQITDVSSNQLIDRG 174
Query: 253 KIAGLEPINFIAVATPHLGSRWNKQLPFLFGVPLLERTAAVTAHFIVGRTGKHLFLTDSD 312
KIAGLEPINFI ATPHLG+R +KQ+P L G LE+ A + +I GR+GKHLFL D +
Sbjct: 175 KIAGLEPINFITFATPHLGTRSHKQIPLLRGSYKLEKMAYRIS-WIAGRSGKHLFLKDIE 233
Query: 313 DGKPPLLLRMAEDCDDGKFMSALRSFKRRVAYANL----------------------QLT 350
DGKPPLLL+M D D FMSALRSFKRRVAY+N+ Q
Sbjct: 234 DGKPPLLLQMVTDYGDLHFMSALRSFKRRVAYSNICNDFIVGWRTSSIRHQHELPKPQNF 293
Query: 351 PSDKKYPHIIHVDKGNSEHHQQEESV--EASLTDSMEEVMIHGLTQVPWERVDVCFHKSW 408
+ KYPH+++V+K + +S+ +A T MEE+M+ GL ++PWERVDV F KS
Sbjct: 294 INHVKYPHVVYVEKPKVQDTDFSDSMIYQAKNTSEMEELMLKGLNRIPWERVDVSFKKSR 353
Query: 409 LRYNAHHNIQI 419
R AH IQ+
Sbjct: 354 QRIFAHSTIQV 364
>Os08g0143700 Protein of unknown function DUF676, hydrolase-like domain
containing protein
Length = 350
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 151/314 (48%), Positives = 195/314 (62%), Gaps = 46/314 (14%)
Query: 136 HLVVMVNGLYGSSADWKFAAEQFVKRLPGKVFVHRSQCNHSKLTYDGVDLMGERLAEEVR 195
HL+VMV+G+ GS+ADW++AA +FVK+LP V VH S+ N + LT +GVD+MGERLA+EV
Sbjct: 36 HLLVMVHGILGSNADWQYAANEFVKQLPDDVIVHCSEKNINTLTLEGVDVMGERLADEVI 95
Query: 196 QVVQRRSNLQKISFVAHSLGGLVTRYAIGKLYDPSINEEASLDKENFSNELRTSDGGKIA 255
V+ R+ L KISF+AHS+GGL RYAI KLY + S+ ++ G I
Sbjct: 96 DVIIRKPELTKISFLAHSVGGLAARYAIAKLY------------RHPSDTSKSETKGTIG 143
Query: 256 GLEPINFIAVATPHLGSRWNKQLPFLFGVPLLERTAAVTAHFIVGRTGKHLFLTDSDDGK 315
GLE +NFI VATPHLGSR N Q+P LFG +E A+ H+I RTGKHLFLTD D+G+
Sbjct: 144 GLEAMNFITVATPHLGSRGNNQVPLLFGSIAMENFASRVVHWIFRRTGKHLFLTDDDEGE 203
Query: 316 PPLLLRMAEDCDDGKFMSALRSFKRRVAYANLQL-------TPS--------------DK 354
PPLL RMAED D F+SAL +F+RRVAYAN T S +
Sbjct: 204 PPLLQRMAEDYGDLYFISALHAFRRRVAYANADCDHIVGWRTSSIRRKTELPKWEESISE 263
Query: 355 KYPHIIHVDKGNSEHHQQE---ESVEASLT----DSMEEVMIHGLTQVPWERVDVCFHKS 407
KYPHI+H E + +E E+ + S T D +EE M+ GL +V WE+VDV FH S
Sbjct: 264 KYPHIVH------EEYSEELGDETCQNSATVCDSDILEEKMVTGLRRVSWEKVDVSFHTS 317
Query: 408 WLRYNAHHNIQILF 421
R+ AH IQ+ +
Sbjct: 318 MQRFAAHSIIQVKY 331
>Os08g0447300 Protein of unknown function DUF676, hydrolase-like domain
containing protein
Length = 315
Score = 184 bits (467), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 109/142 (76%), Gaps = 3/142 (2%)
Query: 136 HLVVMVNGLYGSSADWKFAAEQFVKRLPGKVFVHRSQCNHSKLTYDGVDLMGERLAEEVR 195
HLVVMVNGL GS+ DWKFAAEQFV+R+P KV VHRSQCN + T+DGVDLMGERLA EV
Sbjct: 92 HLVVMVNGLVGSADDWKFAAEQFVRRMPEKVIVHRSQCNSATQTFDGVDLMGERLANEVL 151
Query: 196 QVVQRRSNLQKISFVAHSLGGLVTRYAIGKLYDPSINEEASLDKENFSNELRTSDGGKIA 255
VV++R ++KISFVAHSLGGLV RYAIG+LY+P+ ++S +K E G IA
Sbjct: 152 SVVEQRRGVKKISFVAHSLGGLVARYAIGRLYEPNNKTKSSSEKSRDEGERLE---GFIA 208
Query: 256 GLEPINFIAVATPHLGSRWNKQ 277
GLEP+NFI A+PHLGS NKQ
Sbjct: 209 GLEPMNFITFASPHLGSSGNKQ 230
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 353 DKKYPHIIHVDKGNSEHHQQEESVEASLTDSMEEVMIHGLTQVPWERVDVCFHKSWLRYN 412
D+KYPHI+HVDKG + ++ E + L D EE MI GLTQVPWERVDV F KS R
Sbjct: 237 DEKYPHIVHVDKGATNSNEAE--ARSDLYDPEEE-MIRGLTQVPWERVDVSFQKSSQRLV 293
Query: 413 AHHNIQ 418
AH+ IQ
Sbjct: 294 AHNTIQ 299
>Os02g0655600 Protein of unknown function DUF676, hydrolase-like domain
containing protein
Length = 138
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 51/65 (78%)
Query: 136 HLVVMVNGLYGSSADWKFAAEQFVKRLPGKVFVHRSQCNHSKLTYDGVDLMGERLAEEVR 195
HLVVMV+G+ GS+ADWKF AEQF K L KV VHRS N KLT DGVD+MGERLA+E
Sbjct: 32 HLVVMVHGIVGSAADWKFGAEQFEKLLSDKVIVHRSNRNMYKLTLDGVDVMGERLAQEKG 91
Query: 196 QVVQR 200
+++++
Sbjct: 92 RLLKK 96
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.135 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,287,644
Number of extensions: 479124
Number of successful extensions: 1127
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1117
Number of HSP's successfully gapped: 6
Length of query: 432
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 328
Effective length of database: 11,605,545
Effective search space: 3806618760
Effective search space used: 3806618760
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 157 (65.1 bits)