Os03g0726800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF676, hydrolase-like domain containing protein.
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Os03g0726800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF676, hydrolase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.86 | 0.234 | 9.31 | 0.0669 | 0.113 | 0.307 | 0.236 | -5.26 | 0.218 | 12.8 | 30.01 | 1291 | -- | -- |
| 27.88 | 0.246 | 9.18 | 1.12 | 0.105 | -0.28 | 0.32 | -- | 0.3 | 12.5 | 29.9 | 1233 | -- | -- |
| 25.09 | 0.233 | 9.32 | 0.0537 | 0.112 | 0.316 | -- | -5.37 | 0.217 | 12.8 | 30 | 1291 | -- | -- |
| 27.99 | 0.246 | 9.19 | 1.15 | 0.114 | -0.375 | -- | -- | 0.27 | 12.9 | 31.42 | 3954 | -- | -- |
| 25.78 | 0.236 | 9.32 | 0.079 | -- | 0.297 | -- | -5.53 | 0.211 | -- | 30 | 1203 | -- | -- |
| 31.87 | 0.265 | 9.17 | 1.04 | 0.151 | -- | 0.384 | -- | 0.331 | 13.5 | -- | -- | -- | -- |
| 32.47 | 0.267 | 9.17 | 1.06 | 0.151 | -- | -- | -- | 0.333 | 13.5 | -- | -- | -- | -- |
| 28.63 | 0.249 | 9.19 | 1.15 | -- | -0.34 | -- | -- | 0.265 | -- | 31.5 | 2571 | -- | -- |
| 60.97 | 0.364 | 9.21 | -- | 0.114 | -0.169 | -- | -- | 0.184 | 12.6 | 31.41 | 3474 | -- | -- |
| 33.87 | 0.272 | 9.17 | 1.05 | -- | -- | -- | -- | 0.33 | -- | -- | -- | -- | -- |
| 61.84 | 0.368 | 9.2 | -- | 0.133 | -- | -- | -- | 0.215 | 13.2 | -- | -- | -- | -- |
| 61.56 | 0.367 | 9.21 | -- | -- | 0.115 | -- | -- | 0.182 | -- | 26.1 | 4523 | -- | -- |
| 62.93 | 0.37 | 9.2 | -- | -- | -- | -- | -- | 0.213 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.38 | temperature | 25 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 2 | 24.38 | temperature | 25 | 4320 | < th | dose independent | rect. | 5 | 2 |
| 5 | 24.63 | temperature | 25 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 6 | 24.71 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 21 |
| 7 | 24.72 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 9 | 24.74 | temperature | 25 | 4320 | > th | dose dependent | rect. | 19 | 4 |
| 30 | 24.80 | temperature | 25 | 4320 | > th | dose dependent | rect. | 18 | 13 |
| 38 | 24.85 | temperature | 30 | 1440 | > th | dose independent | sin | 3 | NA |
| 58 | 24.90 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 70 | 24.90 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 21 |
| 75 | 24.91 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 97 | 24.93 | temperature | 30 | 1440 | < th | dose independent | sin | 4 | NA |
| 105 | 24.94 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 219 | 24.95 | temperature | 30 | 1440 | > th | dose independent | rect. | 13 | 23 |
| 242 | 24.97 | temperature | 30 | 4320 | > th | dose independent | rect. | 13 | 3 |
| 245 | 24.97 | temperature | 30 | 1440 | < th | dose independent | rect. | 5 | 10 |
| 252 | 24.97 | temperature | 30 | 1440 | < th | dose independent | rect. | 1 | 14 |
| 269 | 24.98 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 3 |
| 273 | 24.98 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 23 |
| 301 | 25.02 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 339 | 25.04 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 6 |
| 378 | 25.06 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 381 | 25.06 | temperature | 30 | 1440 | < th | dose independent | rect. | 4 | 15 |
| 394 | 25.06 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 19 |
| 405 | 25.06 | temperature | 30 | 1440 | < th | dose independent | rect. | 22 | 21 |
| 421 | 25.06 | temperature | 30 | 1440 | < th | dose independent | rect. | 20 | 23 |
| 541 | 25.13 | temperature | 30 | 4320 | < th | dose independent | sin | 19 | NA |
| 545 | 25.13 | temperature | 30 | 4320 | > th | dose independent | rect. | 13 | 6 |
| 595 | 25.14 | temperature | 30 | 4320 | < th | dose independent | sin | 17 | NA |
| 904 | 25.24 | temperature | 25 | 4320 | > th | dose dependent | sin | 11 | NA |