Os08g0143700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF676, hydrolase-like domain containing protein.
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Os08g0143700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF676, hydrolase-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 50.84 | 0.335 | 7.09 | -0.218 | 0.636 | -1.44 | 0.733 | 0.453 | -0.158 | 4.74 | 29.99 | 14 | -- | -- |
| 51.08 | 0.333 | 7.08 | -0.148 | 0.645 | -1.45 | 0.858 | -- | -0.142 | 4.68 | 29.88 | 13 | -- | -- |
| 51.94 | 0.336 | 7.1 | -0.287 | 0.637 | -1.45 | -- | 0.838 | -0.182 | 4.51 | 29.9 | 13 | -- | -- |
| 52.84 | 0.341 | 7.08 | -0.142 | 0.639 | -1.44 | -- | -- | -0.141 | 4.45 | 29.88 | 13 | -- | -- |
| 67.53 | 0.385 | 7.09 | -0.123 | -- | -0.993 | -- | 0.59 | -0.0919 | -- | 27.25 | 8 | -- | -- |
| 79.78 | 0.419 | 7.02 | 0.18 | 0.362 | -- | 0.749 | -- | 0.141 | 7.59 | -- | -- | -- | -- |
| 81.33 | 0.422 | 7.02 | 0.198 | 0.362 | -- | -- | -- | 0.141 | 7.76 | -- | -- | -- | -- |
| 68.04 | 0.384 | 7.08 | -0.0274 | -- | -1.02 | -- | -- | -0.073 | -- | 26.76 | 2 | -- | -- |
| 53.32 | 0.342 | 7.08 | -- | 0.62 | -1.38 | -- | -- | -0.115 | 4.52 | 29.88 | 13 | -- | -- |
| 88.4 | 0.439 | 7.03 | 0.203 | -- | -- | -- | -- | 0.146 | -- | -- | -- | -- | -- |
| 82.37 | 0.425 | 7.02 | -- | 0.363 | -- | -- | -- | 0.119 | 7.72 | -- | -- | -- | -- |
| 68.06 | 0.384 | 7.08 | -- | -- | -1.01 | -- | -- | -0.0684 | -- | 26.76 | 2 | -- | -- |
| 89.49 | 0.442 | 7.03 | -- | -- | -- | -- | -- | 0.123 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 49.26 | temperature | 10 | 1440 | > th | dose dependent | rect. | 8 | 11 |
| 24 | 49.43 | temperature | 10 | 1440 | > th | dose dependent | sin | 22 | NA |
| 67 | 49.56 | temperature | 30 | 90 | < th | dose dependent | rect. | 21 | 23 |
| 145 | 49.86 | temperature | 30 | 1440 | < th | dose dependent | rect. | 7 | 13 |
| 155 | 49.88 | temperature | 10 | 270 | > th | dose dependent | rect. | 14 | 23 |
| 170 | 49.93 | temperature | 30 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 180 | 49.97 | temperature | 10 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 181 | 49.97 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 16 |
| 191 | 50.01 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 200 | 50.01 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 18 |
| 226 | 50.07 | temperature | 30 | 1440 | < th | dose dependent | sin | 22 | NA |
| 257 | 50.16 | temperature | 30 | 1440 | < th | dose dependent | rect. | 11 | 10 |
| 266 | 50.17 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 22 |
| 385 | 50.39 | temperature | 30 | 10 | < th | dose dependent | rect. | 11 | 23 |
| 399 | 50.42 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 1 |
| 441 | 50.47 | temperature | 30 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 452 | 50.48 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 23 |
| 519 | 50.60 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 5 |
| 693 | 50.86 | temperature | 25 | 1440 | > th | dose independent | rect. | 7 | 15 |
| 710 | 50.88 | temperature | 30 | 10 | < th | dose dependent | no | NA | NA |
| 732 | 50.91 | temperature | 25 | 1440 | < th | dose independent | rect. | 7 | 16 |
| 755 | 50.93 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 784 | 50.96 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 855 | 51.03 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 909 | 51.10 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 931 | 51.14 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 945 | 51.15 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 999 | 51.21 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |