BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0655600 Os02g0655600|AK101560
         (138 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0655600  Protein of unknown function DUF676, hydrolase-...   216   3e-57
Os02g0787100  Protein of unknown function DUF676, hydrolase-...    87   3e-18
Os08g0447300  Protein of unknown function DUF676, hydrolase-...    83   6e-17
Os08g0143700  Protein of unknown function DUF676, hydrolase-...    82   9e-17
Os03g0726800  Protein of unknown function DUF676, hydrolase-...    65   1e-11

>Os02g0655600 Protein of unknown function DUF676, hydrolase-like domain
           containing protein
          Length = 138

 Score =  216 bits (551), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 108/108 (100%), Positives = 108/108 (100%)

Query: 31  DHLVVMVHGIVGSAADWKFGAEQFEKLLSDKVIVHRSNRNMYKLTLDGVDVMGERLAQEK 90
           DHLVVMVHGIVGSAADWKFGAEQFEKLLSDKVIVHRSNRNMYKLTLDGVDVMGERLAQEK
Sbjct: 31  DHLVVMVHGIVGSAADWKFGAEQFEKLLSDKVIVHRSNRNMYKLTLDGVDVMGERLAQEK 90

Query: 91  GRLLKKPTKDHRSERSLLLHILLEDWLQDMLLEDSIGHLNKHPKVLRI 138
           GRLLKKPTKDHRSERSLLLHILLEDWLQDMLLEDSIGHLNKHPKVLRI
Sbjct: 91  GRLLKKPTKDHRSERSLLLHILLEDWLQDMLLEDSIGHLNKHPKVLRI 138



>Os02g0787100 Protein of unknown function DUF676, hydrolase-like domain
           containing protein
          Length = 432

 Score = 87.4 bits (215), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 42/66 (63%), Positives = 52/66 (78%)

Query: 31  DHLVVMVHGIVGSAADWKFGAEQFEKLLSDKVIVHRSNRNMYKLTLDGVDVMGERLAQEK 90
           DHLVVMV+G+ GS+ADWKF AEQF K L  KV VHRS  N  KLT DGVD+MGERLA+E 
Sbjct: 135 DHLVVMVNGLYGSSADWKFAAEQFVKRLPGKVFVHRSQCNHSKLTYDGVDLMGERLAEEV 194

Query: 91  GRLLKK 96
            +++++
Sbjct: 195 RQVVQR 200



>Os08g0447300 Protein of unknown function DUF676, hydrolase-like domain
           containing protein
          Length = 315

 Score = 83.2 bits (204), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 39/59 (66%), Positives = 46/59 (77%)

Query: 31  DHLVVMVHGIVGSAADWKFGAEQFEKLLSDKVIVHRSNRNMYKLTLDGVDVMGERLAQE 89
           +HLVVMV+G+VGSA DWKF AEQF + + +KVIVHRS  N    T DGVD+MGERLA E
Sbjct: 91  EHLVVMVNGLVGSADDWKFAAEQFVRRMPEKVIVHRSQCNSATQTFDGVDLMGERLANE 149



>Os08g0143700 Protein of unknown function DUF676, hydrolase-like domain
           containing protein
          Length = 350

 Score = 82.4 bits (202), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 41/68 (60%), Positives = 52/68 (76%), Gaps = 1/68 (1%)

Query: 31  DHLVVMVHGIVGSAADWKFGAEQFEKLLSDKVIVHRSNRNMYKLTLDGVDVMGERLAQEK 90
           DHL+VMVHGI+GS ADW++ A +F K L D VIVH S +N+  LTL+GVDVMGERLA E 
Sbjct: 35  DHLLVMVHGILGSNADWQYAANEFVKQLPDDVIVHCSEKNINTLTLEGVDVMGERLADEV 94

Query: 91  -GRLLKKP 97
              +++KP
Sbjct: 95  IDVIIRKP 102



>Os03g0726800 Protein of unknown function DUF676, hydrolase-like domain
           containing protein
          Length = 386

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 33/65 (50%), Positives = 44/65 (67%)

Query: 32  HLVVMVHGIVGSAADWKFGAEQFEKLLSDKVIVHRSNRNMYKLTLDGVDVMGERLAQEKG 91
           HLVV V+GIVGSA +W++ A+ F K   + V+VH S  N    T DGVDVMG RLA+E  
Sbjct: 55  HLVVTVNGIVGSAENWRYAAKHFIKKHPEDVVVHCSGCNGAVRTFDGVDVMGTRLAEEVL 114

Query: 92  RLLKK 96
            L+++
Sbjct: 115 SLVQR 119



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.321    0.139    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,604,640
Number of extensions: 121344
Number of successful extensions: 277
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 277
Number of HSP's successfully gapped: 5
Length of query: 138
Length of database: 17,035,801
Length adjustment: 90
Effective length of query: 48
Effective length of database: 12,336,541
Effective search space: 592153968
Effective search space used: 592153968
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 150 (62.4 bits)