BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0644000 Os02g0644000|AK070079
(446 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0644000 Similar to C13 endopeptidase NP1 (Fragment) 910 0.0
Os04g0537900 Similar to C13 endopeptidase NP1 (Fragment) 676 0.0
Os01g0559600 Similar to C13 endopeptidase NP1 precursor 561 e-160
Os05g0593900 Similar to C13 endopeptidase NP1 precursor 460 e-129
Os06g0105100 397 e-111
Os02g0219400 Similar to Yarrowia lipolytica chromosome F of... 74 3e-13
>Os02g0644000 Similar to C13 endopeptidase NP1 (Fragment)
Length = 446
Score = 910 bits (2353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/434 (100%), Positives = 434/434 (100%)
Query: 13 GEGLVARPTPLCRTPIWADVCHAYQILRKGGLKEENIVVFMYDDIANNILNPRPGVIVNH 72
GEGLVARPTPLCRTPIWADVCHAYQILRKGGLKEENIVVFMYDDIANNILNPRPGVIVNH
Sbjct: 13 GEGLVARPTPLCRTPIWADVCHAYQILRKGGLKEENIVVFMYDDIANNILNPRPGVIVNH 72
Query: 73 PQGEDVYAGVPKDYTGDEVTAKNFYAVLLGNKTAVTGGSRKVIDSKPNDHIFIFYSDHGG 132
PQGEDVYAGVPKDYTGDEVTAKNFYAVLLGNKTAVTGGSRKVIDSKPNDHIFIFYSDHGG
Sbjct: 73 PQGEDVYAGVPKDYTGDEVTAKNFYAVLLGNKTAVTGGSRKVIDSKPNDHIFIFYSDHGG 132
Query: 133 PGVLGMPNLPYLYAADFMKVLQEKHASNTYAKMVIYVEACESGSIFEGLMPEDLNIYVTT 192
PGVLGMPNLPYLYAADFMKVLQEKHASNTYAKMVIYVEACESGSIFEGLMPEDLNIYVTT
Sbjct: 133 PGVLGMPNLPYLYAADFMKVLQEKHASNTYAKMVIYVEACESGSIFEGLMPEDLNIYVTT 192
Query: 193 ASNAEESSWGTYCPGMEPSPPSEYITCLGDLYSVSWMEDSETHNLKEESIKKQYEVVKKR 252
ASNAEESSWGTYCPGMEPSPPSEYITCLGDLYSVSWMEDSETHNLKEESIKKQYEVVKKR
Sbjct: 193 ASNAEESSWGTYCPGMEPSPPSEYITCLGDLYSVSWMEDSETHNLKEESIKKQYEVVKKR 252
Query: 253 TSDMNSYGAGSHVMEYGDRTFKDDKLYLYQGFDPANAEVKNKLSWEGPKAAVNQRDADLL 312
TSDMNSYGAGSHVMEYGDRTFKDDKLYLYQGFDPANAEVKNKLSWEGPKAAVNQRDADLL
Sbjct: 253 TSDMNSYGAGSHVMEYGDRTFKDDKLYLYQGFDPANAEVKNKLSWEGPKAAVNQRDADLL 312
Query: 313 FLWRRYELLHDKSEEKLKALREISDTVMHRKLLDSSVDLVGKLLFGFGNGPSVLQAVRPS 372
FLWRRYELLHDKSEEKLKALREISDTVMHRKLLDSSVDLVGKLLFGFGNGPSVLQAVRPS
Sbjct: 313 FLWRRYELLHDKSEEKLKALREISDTVMHRKLLDSSVDLVGKLLFGFGNGPSVLQAVRPS 372
Query: 373 GQPLVDDWDCLKRMVRIFESHCGPLTQYGMKHMRAFANICNNGISGASMKEASIATCSSH 432
GQPLVDDWDCLKRMVRIFESHCGPLTQYGMKHMRAFANICNNGISGASMKEASIATCSSH
Sbjct: 373 GQPLVDDWDCLKRMVRIFESHCGPLTQYGMKHMRAFANICNNGISGASMKEASIATCSSH 432
Query: 433 NSGRWSSLVQGYSA 446
NSGRWSSLVQGYSA
Sbjct: 433 NSGRWSSLVQGYSA 446
>Os04g0537900 Similar to C13 endopeptidase NP1 (Fragment)
Length = 497
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/414 (77%), Positives = 367/414 (88%)
Query: 30 ADVCHAYQILRKGGLKEENIVVFMYDDIANNILNPRPGVIVNHPQGEDVYAGVPKDYTGD 89
ADVCHAYQIL+KGG+KEENIVVFMYDDIA+NILNPRPG I+NHP+G DVYAGVPKDYTG
Sbjct: 80 ADVCHAYQILQKGGVKEENIVVFMYDDIAHNILNPRPGTIINHPKGGDVYAGVPKDYTGH 139
Query: 90 EVTAKNFYAVLLGNKTAVTGGSRKVIDSKPNDHIFIFYSDHGGPGVLGMPNLPYLYAADF 149
+VT +NF+AVLLGNKTAVTGGS KVIDSKP DHIFI+YSDHGGPGVLGMPNLPYLYA DF
Sbjct: 140 QVTTENFFAVLLGNKTAVTGGSGKVIDSKPEDHIFIYYSDHGGPGVLGMPNLPYLYAGDF 199
Query: 150 MKVLQEKHASNTYAKMVIYVEACESGSIFEGLMPEDLNIYVTTASNAEESSWGTYCPGME 209
+KVLQ+KHASN+Y+KMVIYVEACESGSIFEGLMPE+LNIYVTTASNA E+SWGTYCPG E
Sbjct: 200 IKVLQKKHASNSYSKMVIYVEACESGSIFEGLMPENLNIYVTTASNAVENSWGTYCPGEE 259
Query: 210 PSPPSEYITCLGDLYSVSWMEDSETHNLKEESIKKQYEVVKKRTSDMNSYGAGSHVMEYG 269
PSPP EYITCLGD+YSV+WMEDSETHNLK+E+I+ QYE+VKKRTS+ N GSHVMEYG
Sbjct: 260 PSPPPEYITCLGDMYSVAWMEDSETHNLKKETIEDQYELVKKRTSNANKLNEGSHVMEYG 319
Query: 270 DRTFKDDKLYLYQGFDPANAEVKNKLSWEGPKAAVNQRDADLLFLWRRYELLHDKSEEKL 329
D+TFKD+KL+LYQGF+PAN + N+L W PKA VNQRDADLLF+W+RYE L+ SE+KL
Sbjct: 320 DKTFKDEKLFLYQGFNPANGNITNELIWPVPKATVNQRDADLLFMWKRYEQLNGVSEDKL 379
Query: 330 KALREISDTVMHRKLLDSSVDLVGKLLFGFGNGPSVLQAVRPSGQPLVDDWDCLKRMVRI 389
+ALREI DT+ HRK LDSS+D +GKL+FGF NGP L+A R SGQPLVD+WDCLK+MVRI
Sbjct: 380 RALREIEDTIAHRKHLDSSIDFIGKLVFGFENGPLALEAARSSGQPLVDNWDCLKKMVRI 439
Query: 390 FESHCGPLTQYGMKHMRAFANICNNGISGASMKEASIATCSSHNSGRWSSLVQG 443
FES CG LTQYGMK+MRAFANICNNG+S A M EASI C +NS RWS + +G
Sbjct: 440 FESQCGSLTQYGMKYMRAFANICNNGVSEAKMMEASINACGRYNSARWSPMTEG 493
>Os01g0559600 Similar to C13 endopeptidase NP1 precursor
Length = 501
Score = 561 bits (1446), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/419 (63%), Positives = 323/419 (77%), Gaps = 2/419 (0%)
Query: 30 ADVCHAYQILRKGGLKEENIVVFMYDDIANNILNPRPGVIVNHPQGEDVYAGVPKDYTGD 89
ADVCHAYQI+++GGLK+ENI+VFMYDDIA+N NPRPGVI+NHPQG DVYAGVPKDYTG
Sbjct: 83 ADVCHAYQIMKRGGLKDENIIVFMYDDIAHNPENPRPGVIINHPQGGDVYAGVPKDYTGK 142
Query: 90 EVTAKNFYAVLLGNKTAVTGGSRKVIDSKPNDHIFIFYSDHGGPGVLGMPNLPYLYAADF 149
EV KN +AVLLGNKTAV GGS KV+DS PNDHIFIFYSDHGGPGVLGMP PYLY D
Sbjct: 143 EVNVKNLFAVLLGNKTAVKGGSGKVLDSGPNDHIFIFYSDHGGPGVLGMPTYPYLYGDDL 202
Query: 150 MKVLQEKHASNTYAKMVIYVEACESGSIFEGLMPEDLNIYVTTASNAEESSWGTYCPGME 209
+ VL++KHA+ TY +V Y+EACESGSIFEGL+P +N+Y TTASNA+ESSWGTYCPG
Sbjct: 203 VDVLKKKHAAGTYKSLVFYLEACESGSIFEGLLPNGINVYATTASNADESSWGTYCPGEY 262
Query: 210 PSPPSEYITCLGDLYSVSWMEDSETHNLKEESIKKQYEVVKKRTSDMNSYGAGSHVMEYG 269
PSPP EY TCLGDLYSV+WMEDS+ HNL+ ES+K+QY +VK+RTS ++Y +GSHVMEYG
Sbjct: 263 PSPPPEYDTCLGDLYSVAWMEDSDVHNLRTESLKQQYNLVKERTSVQHTYYSGSHVMEYG 322
Query: 270 DRTFKDDKLYLYQGFDPA--NAEVKNKLSWEGPKAAVNQRDADLLFLWRRYELLHDKSEE 327
+++Y G +PA NA S AVNQRDADL++ W++Y L + S E
Sbjct: 323 SLELNAHHVFMYMGSNPANDNATFVEDNSLPSFSRAVNQRDADLVYFWQKYRKLPESSPE 382
Query: 328 KLKALREISDTVMHRKLLDSSVDLVGKLLFGFGNGPSVLQAVRPSGQPLVDDWDCLKRMV 387
K +A +++ + + HR +D+SV+L+G LLFG GP VL+AVR +G+PLVDDW CLK MV
Sbjct: 383 KNEARKQLLEMMAHRSHVDNSVELIGNLLFGSEEGPRVLKAVRATGEPLVDDWSCLKSMV 442
Query: 388 RIFESHCGPLTQYGMKHMRAFANICNNGISGASMKEASIATCSSHNSGRWSSLVQGYSA 446
R FE+ CG L QYGMKHMR+FANICN GIS +M + + C+S S WSS +G+SA
Sbjct: 443 RTFEAQCGSLAQYGMKHMRSFANICNAGISAEAMAKVAAQACTSIPSNPWSSTHRGFSA 501
>Os05g0593900 Similar to C13 endopeptidase NP1 precursor
Length = 474
Score = 460 bits (1183), Expect = e-129, Method: Compositional matrix adjust.
Identities = 231/414 (55%), Positives = 292/414 (70%), Gaps = 16/414 (3%)
Query: 30 ADVCHAYQILRKGGLKEENIVVFMYDDIANNILNPRPGVIVNHPQGEDVYAGVPKDYTGD 89
ADVCHAYQI+RKGG++E+NIVV MYDDIA+N NPRPG+I NHP G DVYAGVPKDYTGD
Sbjct: 59 ADVCHAYQIMRKGGVEEQNIVVMMYDDIAHNPDNPRPGLIFNHPSGPDVYAGVPKDYTGD 118
Query: 90 EVTAKNFYAVLLGNKTAVTG-GSRKVIDSKPNDHIFIFYSDHGGPGVLGMP-NLPYLYAA 147
+V NF AVLLGN++A+TG GS KV+ S PNDH+F++Y+DHGGPGVL MP + YLYA
Sbjct: 119 DVNVNNFLAVLLGNRSALTGSGSGKVVASGPNDHVFVYYADHGGPGVLSMPADGEYLYAD 178
Query: 148 DFMKVLQEKHASNTYAKMVIYVEACESGSIFEGLMPEDLNIYVTTASNAEESSWGTYCPG 207
D +K L++KHA Y +V+YVEACESGSIFEGL+P D+++Y TTASNAEESSWGTYCPG
Sbjct: 179 DLVKALKKKHAGGGYKSLVVYVEACESGSIFEGLLPSDISVYATTASNAEESSWGTYCPG 238
Query: 208 ME-PSPPSEYITCLGDLYSVSWMEDSETHNLKE--ESIKKQYEVVKKRTSDMNSYGAGSH 264
+ +P +E+ TCLGDLYSV+WMED+E H E++++QY VK RTSD +Y GSH
Sbjct: 239 DDHDAPAAEFDTCLGDLYSVAWMEDAEAHQEGRLAETLRQQYRTVKNRTSDEGTYTLGSH 298
Query: 265 VMEYGDRTFKDDKLYL-YQGFDPANAEVKNKLSWEGPKA------AVNQRDADLLFLWRR 317
VM+YGD L L Y PA A +KL+ G K +VNQRDADLL+LWR+
Sbjct: 299 VMQYGDMALAPQSLDLYYMDTSPATAN-DHKLAAAGAKGSHSYTVSVNQRDADLLYLWRK 357
Query: 318 YELLHDKSEEKLKALREISDTVMHRKLLDSSVDLVGKLLFGFGNGPSVLQAVRPSGQPLV 377
Y + + EK++A + + R +D SV+++G LL G G Q V LV
Sbjct: 358 YRRAGEGTAEKVEARERLVQEMGRRSRVDRSVEMIGGLLLG---GAKHKQQVVRERAALV 414
Query: 378 DDWDCLKRMVRIFESHCGPLTQYGMKHMRAFANICNNGISGASMKEASIATCSS 431
+DW+CL+ MVR FE CG L QYG+KHMR+FANICN G+ +M +A+ C S
Sbjct: 415 EDWECLRSMVRTFEDQCGSLGQYGIKHMRSFANICNAGVPHHAMAKAASLACPS 468
>Os06g0105100
Length = 452
Score = 397 bits (1020), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/404 (50%), Positives = 268/404 (66%), Gaps = 22/404 (5%)
Query: 30 ADVCHAYQILRKGGLKEENIVVFMYDDIANNILNPRPGVIVNHPQGEDVYAGVPKDYTGD 89
ADVCHAYQI++KGGLK++NIVV MYDDIA N NP GVI+N P G +VYAGVPKDY G+
Sbjct: 59 ADVCHAYQIMKKGGLKDQNIVVMMYDDIAYNPENPHKGVIINKPNGPNVYAGVPKDYNGN 118
Query: 90 EVTAKNFYAVLLGNKTAVTG-GSRKVIDSKPNDHIFIFYSDHGGPGVLGMPNLPYLYAAD 148
+V NF AVLLG K+A+TG GS KVI S PNDHIF++YSDHG PG + MP+ L+A D
Sbjct: 119 DVNKNNFLAVLLGKKSALTGAGSGKVISSGPNDHIFVYYSDHGSPGYVCMPSGGNLHAND 178
Query: 149 FMKVLQEKHASNTYAKMVIYVEACESGSIFEG-LMPEDLNIYVTTASNAEESSWGTYCPG 207
+ L+ K+A+ Y +V+YVEACESGS+FEG L+P ++ +Y TASNA E+SW TYC
Sbjct: 179 LSQALKNKNAAGAYKNLVVYVEACESGSMFEGQLLPSNIGVYAMTASNATENSWATYC-- 236
Query: 208 MEPSPPSEYITCLGDLYSVSWMEDSETHNLKE-ESIKKQYEVVKKRTSDMNSYGAGSHVM 266
+P EY TCLGDL+SV+WMED++ + E++ + Y++V KRT+ SHV
Sbjct: 237 --DTP--EYNTCLGDLFSVAWMEDADARRPGDPETLGQLYDIVAKRTNL-------SHVS 285
Query: 267 EYGDRTFKDDKLYLYQ-GFDPANAEVKNKLSWEGPKAAVNQRDADLLFLWRRYELLHDKS 325
YGD + + LY P + + EG VNQRDA L++LWR+Y
Sbjct: 286 RYGDLSLSSQPVSLYYLPPGPGTSTASAVIDDEGRVGGVNQRDAGLVYLWRKY-----YE 340
Query: 326 EEKLKALREISDTVMHRKLLDSSVDLVGKLLFGFGNGPSVLQAVRPSGQPLVDDWDCLKR 385
E+ ++A + + R +DSSVDL+G +L G + +L RP+GQPLVDDWDCLK
Sbjct: 341 EKSVEAWERLLREMERRSRVDSSVDLIGDILLGDSSKKKLLHIRRPAGQPLVDDWDCLKS 400
Query: 386 MVRIFESHCGPLTQYGMKHMRAFANICNNGISGASMKEASIATC 429
MVR FE+HCGPL QYGMKH RAFAN+CN + M +A+ C
Sbjct: 401 MVRTFEAHCGPLGQYGMKHTRAFANMCNAALDHNHMAKAASKAC 444
>Os02g0219400 Similar to Yarrowia lipolytica chromosome F of strain CLIB99 of
Yarrowia lipolytica
Length = 404
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 88/170 (51%), Gaps = 15/170 (8%)
Query: 23 LCRTPIW------ADVCHAYQILRKGGLKEENIVVFMYDDIANNILNPRPGVIVNHPQGE 76
+C + W A+ Y+ +++ G+ +E I++ + DD+A N N P + N+ +
Sbjct: 52 VCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNPRNNYPAQVFNNENHQ 111
Query: 77 -DVYA-GVPKDYTGDEVTAKNFYAVLLGNKTAVTGGSRKVIDSKPNDHIFIFYSDHGGPG 134
++Y V DY G EVT +NF VL G + S++++ S HI ++ + HGG
Sbjct: 112 LNLYGDNVEVDYRGYEVTVENFLRVLTGRHESAVPRSKRLL-SDEGSHILLYMTGHGGDE 170
Query: 135 VLGMPNLPYLYA---ADFMKVLQEKHASNTYAKMVIYVEACESGSIFEGL 181
L + L + AD +K ++EKH + +++I V+ C++ ++F L
Sbjct: 171 FLKFQDSEELQSHDLADAVKQMKEKH---RFKELLIMVDTCQAATLFSQL 217
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.135 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,661,954
Number of extensions: 750009
Number of successful extensions: 1705
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1691
Number of HSP's successfully gapped: 6
Length of query: 446
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 342
Effective length of database: 11,605,545
Effective search space: 3969096390
Effective search space used: 3969096390
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 158 (65.5 bits)