BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0601300 Os02g0601300|AK099086
(337 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0601300 Similar to Glyceraldehyde-3-phosphate dehydrog... 657 0.0
Os04g0486600 Similar to Glyceraldehyde-3-phosphate dehydrog... 618 e-177
Os08g0126300 Similar to Glyceraldehyde-3-phosphate dehydrog... 578 e-165
AK100159 578 e-165
Os06g0666600 Similar to Glyceraldehyde-3-phosphate dehydrog... 486 e-138
Os02g0171100 Similar to Glyceraldehyde-3-phosphate dehydrog... 481 e-136
AK109097 459 e-130
AK108644 446 e-126
AK108431 445 e-125
Os03g0129300 Similar to Glyceraldehyde-3-phosphate dehydrog... 265 4e-71
AK109016 250 9e-67
Os04g0459500 Similar to GADPH (383 AA) (Fragment) 239 2e-63
D21280 188 5e-48
>Os02g0601300 Similar to Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3
(EC 1.2.1.12)
Length = 337
Score = 657 bits (1696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/337 (95%), Positives = 322/337 (95%)
Query: 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHE 60
MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHE
Sbjct: 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHE 60
Query: 61 VKVKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTXXXXXXXXXXXXXXX 120
VKVKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFT
Sbjct: 61 VKVKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTDKDKAAAHLKGGAKK 120
Query: 121 VVISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTV 180
VVISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTV
Sbjct: 121 VVISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTV 180
Query: 181 HAITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240
HAITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV
Sbjct: 181 HAITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240
Query: 241 DVSVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDAK 300
DVSVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDAK
Sbjct: 241 DVSVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDAK 300
Query: 301 AGIALSDTFVKLVSWYDNEWGYSTRVIDLIRHMHSTN 337
AGIALSDTFVKLVSWYDNEWGYSTRVIDLIRHMHSTN
Sbjct: 301 AGIALSDTFVKLVSWYDNEWGYSTRVIDLIRHMHSTN 337
>Os04g0486600 Similar to Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3
(EC 1.2.1.12)
Length = 337
Score = 618 bits (1593), Expect = e-177, Method: Compositional matrix adjust.
Identities = 299/337 (88%), Positives = 312/337 (92%)
Query: 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHE 60
M KIKIGINGFGRIGRLVARVALQS+DVELVAVNDPFITT+YMTYMFKYDTVHGQWKHHE
Sbjct: 1 MAKIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHHE 60
Query: 61 VKVKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTXXXXXXXXXXXXXXX 120
VKVKDSKTL+FG KEV VFGCRNPEEIPW GAE+VVESTGVFT
Sbjct: 61 VKVKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTDKDKAAAHLKGGAKK 120
Query: 121 VVISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTV 180
VVISAPSKDAPMFVVGVNEKEYK D++IVSNASCTTNCLAPLAKVINDRFGIVEGLMTTV
Sbjct: 121 VVISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTV 180
Query: 181 HAITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240
HAITATQKTVDGPS KDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV
Sbjct: 181 HAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240
Query: 241 DVSVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDAK 300
DVSVVDLTVRLEKPASYDQIKAAIKEE+EGKLKGILGYVEEDLVSTDFQGD+RSSIFDAK
Sbjct: 241 DVSVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFDAK 300
Query: 301 AGIALSDTFVKLVSWYDNEWGYSTRVIDLIRHMHSTN 337
AGIAL+D FVKLVSWYDNEWGYS+RV+DLIRHM++T
Sbjct: 301 AGIALNDNFVKLVSWYDNEWGYSSRVVDLIRHMYNTQ 337
>Os08g0126300 Similar to Glyceraldehyde-3-phosphate dehydrogenase (Fragment)
Length = 337
Score = 578 bits (1491), Expect = e-165, Method: Compositional matrix adjust.
Identities = 281/337 (83%), Positives = 299/337 (88%)
Query: 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHE 60
MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITT+YMTYMFKYDTVHGQWKH +
Sbjct: 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSD 60
Query: 61 VKVKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTXXXXXXXXXXXXXXX 120
+K+KDSKTL+ G K V VFG RNP+EIPWA AGAEYVVESTGVFT
Sbjct: 61 IKIKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKK 120
Query: 121 VVISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTV 180
VVISAPSKDAPMFV GVNE +Y SD++IVSNASCTTNCLAPLAKVI+D FGI+EGLMTTV
Sbjct: 121 VVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTV 180
Query: 181 HAITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240
HAITATQKTVDGPS KDWRGGRAASFNIIPSSTGAAKAVGKVLP LNGKLTGM+FRVPTV
Sbjct: 181 HAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTV 240
Query: 241 DVSVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDAK 300
DVSVVDLTVR+EK ASYD IK+AIK +EGKLKGI+GYVEEDLVSTDF GDSRSSIFDAK
Sbjct: 241 DVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAK 300
Query: 301 AGIALSDTFVKLVSWYDNEWGYSTRVIDLIRHMHSTN 337
AGIAL+D FVKLV+WYDNEWGYS RVIDLIRHM T
Sbjct: 301 AGIALNDNFVKLVAWYDNEWGYSNRVIDLIRHMAKTQ 337
>AK100159
Length = 337
Score = 578 bits (1491), Expect = e-165, Method: Compositional matrix adjust.
Identities = 281/337 (83%), Positives = 299/337 (88%)
Query: 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHE 60
MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITT+YMTYMFKYDTVHGQWKH +
Sbjct: 1 MGKIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSD 60
Query: 61 VKVKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTXXXXXXXXXXXXXXX 120
+K+KDSKTL+ G K V VFG RNP+EIPWA AGAEYVVESTGVFT
Sbjct: 61 IKIKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKK 120
Query: 121 VVISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTV 180
VVISAPSKDAPMFV GVNE +Y SD++IVSNASCTTNCLAPLAKVI+D FGI+EGLMTTV
Sbjct: 121 VVISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTV 180
Query: 181 HAITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTV 240
HAITATQKTVDGPS KDWRGGRAASFNIIPSSTGAAKAVGKVLP LNGKLTGM+FRVPTV
Sbjct: 181 HAITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTV 240
Query: 241 DVSVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDAK 300
DVSVVDLTVR+EK ASYD IK+AIK +EGKLKGI+GYVEEDLVSTDF GDSRSSIFDAK
Sbjct: 241 DVSVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAK 300
Query: 301 AGIALSDTFVKLVSWYDNEWGYSTRVIDLIRHMHSTN 337
AGIAL+D FVKLV+WYDNEWGYS RVIDLIRHM T
Sbjct: 301 AGIALNDNFVKLVAWYDNEWGYSNRVIDLIRHMAKTQ 337
>Os06g0666600 Similar to Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3
(EC 1.2.1.12)
Length = 415
Score = 486 bits (1252), Expect = e-138, Method: Compositional matrix adjust.
Identities = 236/335 (70%), Positives = 267/335 (79%), Gaps = 1/335 (0%)
Query: 3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHEVK 62
K K+GINGFGRIGRLV R+A +D+E+VAVNDPFI +YM YMFKYD+ HG +K +K
Sbjct: 79 KTKVGINGFGRIGRLVLRIATNRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKG-TIK 137
Query: 63 VKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTXXXXXXXXXXXXXXXVV 122
V D TL K+++V R+P +IPW GAEYVVES+GVFT VV
Sbjct: 138 VVDESTLEINGKKISVTSKRDPSDIPWGNFGAEYVVESSGVFTTTEKASAHLKGGARKVV 197
Query: 123 ISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHA 182
ISAPS DAPMFVVGVNEK Y +N+VSNASCTTNCLAPLAK++++ FGI EGLMTTVHA
Sbjct: 198 ISAPSADAPMFVVGVNEKNYNPSMNVVSNASCTTNCLAPLAKIVHEEFGIAEGLMTTVHA 257
Query: 183 ITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 242
TATQKTVDGPSMKDWRGGR AS NIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPT +V
Sbjct: 258 TTATQKTVDGPSMKDWRGGRGASQNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTPNV 317
Query: 243 SVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDAKAG 302
SVVDLT RLEK ASY+ +KAAIKE +EG LKGILGY +ED+VS DF GD+RSSIFDAKAG
Sbjct: 318 SVVDLTCRLEKSASYEDVKAAIKEASEGSLKGILGYTDEDVVSNDFIGDTRSSIFDAKAG 377
Query: 303 IALSDTFVKLVSWYDNEWGYSTRVIDLIRHMHSTN 337
I LS +F+KLVSWYDNEWGYS RV+DLI HM N
Sbjct: 378 IGLSSSFMKLVSWYDNEWGYSNRVLDLIGHMALVN 412
>Os02g0171100 Similar to Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
(GAPDH)
Length = 411
Score = 481 bits (1239), Expect = e-136, Method: Compositional matrix adjust.
Identities = 235/335 (70%), Positives = 265/335 (79%), Gaps = 1/335 (0%)
Query: 3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHEVK 62
K K+GINGFGRIGRLV R+A +D+E+VAVNDPFI +YM YMFKYD+ HG +K +K
Sbjct: 75 KTKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKG-SIK 133
Query: 63 VKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTXXXXXXXXXXXXXXXVV 122
V D TL K+V + R+P +IPW GAEYVVES+GVFT VV
Sbjct: 134 VVDDSTLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKVV 193
Query: 123 ISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHA 182
ISAPS DAPMFVVGVNEK Y +N+VSNASCTTNCLAPLAKV+++ FGIVEGLMTTVHA
Sbjct: 194 ISAPSADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAKVVHEEFGIVEGLMTTVHA 253
Query: 183 ITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 242
TATQKTVDGPSMKDWRGGR A+ NIIPSSTGAAKAVGKVLP LNGKLTGMAFRVPT +V
Sbjct: 254 TTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNV 313
Query: 243 SVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDAKAG 302
SVVDLT R+EK ASYD +KAAIK +EG LKGILGY +ED+VS DF GD+RSSIFDAKAG
Sbjct: 314 SVVDLTCRIEKSASYDDVKAAIKAASEGALKGILGYTDEDVVSNDFVGDARSSIFDAKAG 373
Query: 303 IALSDTFVKLVSWYDNEWGYSTRVIDLIRHMHSTN 337
I LS +F+KLVSWYDNEWGYS RV+DLI HM N
Sbjct: 374 IGLSSSFMKLVSWYDNEWGYSNRVLDLIAHMALVN 408
>AK109097
Length = 334
Score = 459 bits (1182), Expect = e-130, Method: Compositional matrix adjust.
Identities = 225/333 (67%), Positives = 264/333 (79%), Gaps = 9/333 (2%)
Query: 6 IGINGFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWK---HHEVK 62
IGINGFGRIGR+V R AL+ + V +VA+NDPFI +YM YMFKYD+ HG++K HH
Sbjct: 5 IGINGFGRIGRIVLRAALE-KGVNVVAINDPFIPLDYMVYMFKYDSTHGRFKGDIHHA-- 61
Query: 63 VKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTXXXXXXXXXXXXXXXVV 122
+ L +++VF ++P +IPW +GAEYVVE+ GVFT V+
Sbjct: 62 ---NGFLYVNGHQISVFTEKDPTQIPWGKSGAEYVVEAAGVFTTIDKCQAHITGGAKKVI 118
Query: 123 ISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHA 182
I+APS DAPMFV GVNEK Y +NI+SNASCTTNCLAPLAKVIND+FGIVEGLMTTVH+
Sbjct: 119 ITAPSADAPMFVCGVNEKTYNPSINILSNASCTTNCLAPLAKVINDKFGIVEGLMTTVHS 178
Query: 183 ITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 242
TATQKTVDGPS KDWRGGR A+ NIIPSSTGAAKAVGKV+P LNGKLTGMAFRVPT DV
Sbjct: 179 YTATQKTVDGPSNKDWRGGRTAATNIIPSSTGAAKAVGKVIPDLNGKLTGMAFRVPTADV 238
Query: 243 SVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDAKAG 302
SVVDLTVRL KPA YD+IKAA+K +EG+LKGIL Y E+++VS+DF GD SSIFDAKAG
Sbjct: 239 SVVDLTVRLAKPAKYDEIKAAVKAASEGELKGILAYTEDEVVSSDFIGDHHSSIFDAKAG 298
Query: 303 IALSDTFVKLVSWYDNEWGYSTRVIDLIRHMHS 335
I+L+D FVKLVSWYDNE+GYS RVIDLI+H+HS
Sbjct: 299 ISLNDNFVKLVSWYDNEFGYSCRVIDLIKHVHS 331
>AK108644
Length = 333
Score = 446 bits (1148), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/332 (67%), Positives = 256/332 (77%), Gaps = 2/332 (0%)
Query: 4 IKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHEVKV 63
+K+G+NGFGRIGRLV R A+ S V++VA+NDPFI YM YMFKYD+ HG +K VK
Sbjct: 2 VKVGVNGFGRIGRLVTRAAVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFKG-TVKA 60
Query: 64 KDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTXXXXXXXXXXXXXXXVVI 123
++ K +I G + +F R+P I WA AGAEYVVESTGVFT V+I
Sbjct: 61 ENGKLVING-HAITIFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGGAKRVII 119
Query: 124 SAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAI 183
SAPS DAPMFV+GVN ++Y + IVSNASCTTNCLAPLAKVI+D FGIVEGLMTTVHAI
Sbjct: 120 SAPSADAPMFVMGVNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAI 179
Query: 184 TATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVS 243
TATQKTVDGPS K WR GR A+ NIIP+STGAAKAVGKV+P LNGKLTGMAFRVPT +VS
Sbjct: 180 TATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVS 239
Query: 244 VVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDAKAGI 303
VVDLT RLEKPA YD IK +K A+G LKGILGY E+ +VS DF GDS SS FDA AGI
Sbjct: 240 VVDLTCRLEKPAKYDDIKRVVKAAADGPLKGILGYTEDQVVSCDFNGDSHSSTFDAGAGI 299
Query: 304 ALSDTFVKLVSWYDNEWGYSTRVIDLIRHMHS 335
AL+D FVKLVSWYDNE+GYS RV+DL+ HM S
Sbjct: 300 ALNDHFVKLVSWYDNEFGYSNRVVDLMVHMAS 331
>AK108431
Length = 337
Score = 445 bits (1144), Expect = e-125, Method: Compositional matrix adjust.
Identities = 213/329 (64%), Positives = 257/329 (78%), Gaps = 1/329 (0%)
Query: 5 KIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHEVKVK 64
K+GINGFGRIGR+V R A Q+ V++VAVNDPFI Y YM +YD+ HGQ+K +++
Sbjct: 4 KVGINGFGRIGRIVFRNATQAGTVDVVAVNDPFIEVHYAAYMLRYDSTHGQFKG-TIEIN 62
Query: 65 DSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTXXXXXXXXXXXXXXXVVIS 124
++ LI K++ + R+P IPW GA+YVVESTGVFT V+IS
Sbjct: 63 GTEGLIVNGKKIRFYAERDPAAIPWGKEGADYVVESTGVFTTTDKASAHIKGGAKKVIIS 122
Query: 125 APSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAIT 184
APS DAPMFV+GVN Y DVN++SNASCTTNCLAPLAKVIND++G+VEGLMTTVH+ T
Sbjct: 123 APSADAPMFVMGVNNDSYTKDVNVLSNASCTTNCLAPLAKVINDKYGLVEGLMTTVHSYT 182
Query: 185 ATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSV 244
ATQKTVDGPS KDWRGGR A+ NIIPSSTGAAKAVGKV+P+LNGKLTGM+ RVPT +VSV
Sbjct: 183 ATQKTVDGPSGKDWRGGRTAAQNIIPSSTGAAKAVGKVIPSLNGKLTGMSMRVPTANVSV 242
Query: 245 VDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDAKAGIA 304
VDLT R+EK A+Y++IKA IK +E +LKGILGY E+D+VSTD GD SSIFDAKAGIA
Sbjct: 243 VDLTCRIEKGATYEEIKATIKAASENELKGILGYTEDDIVSTDLNGDDHSSIFDAKAGIA 302
Query: 305 LSDTFVKLVSWYDNEWGYSTRVIDLIRHM 333
L+ F+KLVSWYDNEWGYS RV+DLI ++
Sbjct: 303 LNANFIKLVSWYDNEWGYSHRVVDLISYI 331
>Os03g0129300 Similar to Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
(Fragment)
Length = 444
Score = 265 bits (676), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 154/333 (46%), Positives = 210/333 (63%), Gaps = 9/333 (2%)
Query: 3 KIKIGINGFGRIGRLVARVALQSED--VELVAVNDPFITTEYMTYMFKYDTVHGQWKHHE 60
K+K+ INGFGRIGR R + E+ +E+V VND +++ KYD++ G +K +
Sbjct: 77 KLKVAINGFGRIGRNFLRCWHERENSPLEVVVVNDSG-GVRNASHLLKYDSMLGTFKA-D 134
Query: 61 VKVKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTXXXXXXXXXXXXXXX 120
VK+ D +T+ K + V R+P ++PWA G + V+E TGVF
Sbjct: 135 VKIVDDQTISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKK 194
Query: 121 VVISAPSK--DAPMFVVGVNEKEYKSDV-NIVSNASCTTNCLAPLAKVINDRFGIVEGLM 177
V+I+AP+K D P +V+GVNE +Y +V NI+SNASCTTNCLAP K++++ FGIV+G M
Sbjct: 195 VIITAPAKGADIPTYVLGVNEGDYSHEVANIISNASCTTNCLAPFVKILDEEFGIVKGTM 254
Query: 178 TTVHAITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRV 237
TT H+ T Q+ +D S +D R RAA+ NI+P+STGAAKAV VLP L GKL G+A RV
Sbjct: 255 TTTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVALVLPQLKGKLNGIALRV 313
Query: 238 PTVDVSVVDLTVRLEKPA-SYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSI 296
PT +VSVVDL + K + D + AA ++ A G L GIL + LVS DF+ SS
Sbjct: 314 PTPNVSVVDLVINTVKTGITADDVNAAFRKAAAGPLSGILDVCDVPLVSVDFRCSDVSST 373
Query: 297 FDAKAGIALSDTFVKLVSWYDNEWGYSTRVIDL 329
DA + + D VK+V+WYDNEWGYS RV+DL
Sbjct: 374 IDASLTMVMGDDMVKVVAWYDNEWGYSQRVVDL 406
>AK109016
Length = 377
Score = 250 bits (639), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 152/331 (45%), Positives = 206/331 (62%), Gaps = 7/331 (2%)
Query: 3 KIKIGINGFGRIGRLVARVALQSED--VELVAVNDPFITTEYMTYMFKYDTVHGQWKHHE 60
KIK+ INGFGRIGR R D +++VA+ND + +++ KYD+ G++ E
Sbjct: 41 KIKVAINGFGRIGRNFMRCLETRTDSLLDVVAINDSG-GVKQASHLLKYDSTLGKF-DAE 98
Query: 61 VKVKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTXXXXXXXXXXXXXXX 120
VKV D + K + V R+P ++PW + V+E TGVF
Sbjct: 99 VKVVDDGHISVNGKVIRVVSSRDPTKLPWGDLDIDLVIEGTGVFIDTPGASKHIQAGAKK 158
Query: 121 VVISAPSK--DAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMT 178
V+I+AP+K D P +VVGVN +YK I+SNASCTTNCLAP KV++++FGIV+G MT
Sbjct: 159 VLITAPAKGSDIPTYVVGVNAHDYKHSDAIISNASCTTNCLAPFVKVLDEKFGIVKGTMT 218
Query: 179 TVHAITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP 238
T H+ T Q+ +D S +D R RAA+ NI+P++TGAAKAV VLP L GKL G+A RVP
Sbjct: 219 TTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTTTGAAKAVALVLPKLKGKLNGIALRVP 277
Query: 239 TVDVSVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFD 298
T +VSVVDL V++EK +++ A KE A G L G+L +E LVS DF+ SS D
Sbjct: 278 TPNVSVVDLVVQVEKKTFAEEVNNAFKEAANGALNGVLAVGDEPLVSVDFRCTDVSSTID 337
Query: 299 AKAGIALSDTFVKLVSWYDNEWGYSTRVIDL 329
+ + + D VK+V+WYDNEWGYS RV+DL
Sbjct: 338 SSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL 368
>Os04g0459500 Similar to GADPH (383 AA) (Fragment)
Length = 402
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 145/331 (43%), Positives = 200/331 (60%), Gaps = 7/331 (2%)
Query: 3 KIKIGINGFGRIGRLVARV---ALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHH 59
K+K+ INGFGRIGR R S ++++A+ND + +++ KYD+ G +
Sbjct: 66 KLKVAINGFGRIGRNFLRCWHGRGDSSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDAD 124
Query: 60 EVKVKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTXXXXXXXXXXXXXX 119
V D+ + G K + V RNP +PW G + V+E TGVF
Sbjct: 125 VKPVGDNAISVDG-KVIKVVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQAGAK 183
Query: 120 XVVISAPSK-DAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMT 178
V+I+AP K D P +VVGVN +Y D I+SNASCTTNCLAP K+++ +FGI++G MT
Sbjct: 184 KVLITAPGKGDIPTYVVGVNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGIIKGTMT 243
Query: 179 TVHAITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVP 238
T H+ T Q+ +D S +D R RAA+ NI+P+STGAAKAV VLP L GKL G+A RVP
Sbjct: 244 TTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVP 302
Query: 239 TVDVSVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFD 298
T +VSVVDL V++ K +++ A ++ A +LKGIL + LVS DF+ S D
Sbjct: 303 TPNVSVVDLVVQVSKKTLAEEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSDVSCTID 362
Query: 299 AKAGIALSDTFVKLVSWYDNEWGYSTRVIDL 329
A + + D VK+++WYDNEWGYS RV+DL
Sbjct: 363 ASLSMVMGDDMVKVIAWYDNEWGYSQRVVDL 393
>D21280
Length = 95
Score = 188 bits (477), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 88/92 (95%), Positives = 88/92 (95%)
Query: 7 GINGFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHEVKVKDS 66
GINGFGRIGRL ARVALQSEDVELVAVN PFITT YMTYMFKYDTVHGQWKHHEVKVKDS
Sbjct: 4 GINGFGRIGRLXARVALQSEDVELVAVNXPFITTXYMTYMFKYDTVHGQWKHHEVKVKDS 63
Query: 67 KTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVV 98
KTLIFGTKEVAVFGCRNPEEIPWAAAGAEYV
Sbjct: 64 KTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVC 95
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.133 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,289,667
Number of extensions: 390383
Number of successful extensions: 1006
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 989
Number of HSP's successfully gapped: 13
Length of query: 337
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 236
Effective length of database: 11,762,187
Effective search space: 2775876132
Effective search space used: 2775876132
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 156 (64.7 bits)