BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0597900 Os02g0597900|J080030B09
(147 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0597900 Similar to B-keto acyl reductase (Beta-ketoacy... 271 1e-73
Os04g0483500 Similar to B-keto acyl reductase 230 3e-61
Os11g0432600 Similar to Beta-keto acyl reductase (Fragment) 179 4e-46
Os04g0116600 Glucose/ribitol dehydrogenase family protein 130 3e-31
Os06g0300000 Glucose/ribitol dehydrogenase family protein 129 9e-31
Os06g0300200 128 2e-30
Os06g0299100 Glucose/ribitol dehydrogenase family protein 121 1e-28
Os06g0299300 Glucose/ribitol dehydrogenase family protein 115 2e-26
Os06g0299200 Glucose/ribitol dehydrogenase family protein 109 8e-25
Os06g0298700 Glucose/ribitol dehydrogenase family protein 65 3e-11
>Os02g0597900 Similar to B-keto acyl reductase (Beta-ketoacyl reductase)
Length = 147
Score = 271 bits (693), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 131/131 (100%), Positives = 131/131 (100%)
Query: 1 AVLPAMVERKRGAIVNIGSGSSSVMPSDPLYSVYAATKAYVDQFSRCLYVEYKSKGIDVQ 60
AVLPAMVERKRGAIVNIGSGSSSVMPSDPLYSVYAATKAYVDQFSRCLYVEYKSKGIDVQ
Sbjct: 1 AVLPAMVERKRGAIVNIGSGSSSVMPSDPLYSVYAATKAYVDQFSRCLYVEYKSKGIDVQ 60
Query: 61 CQVPLYVATKMASIRKSSFFVPSADTYARAAIRHIGYEPRCTPYWPHSVMWFLISILPES 120
CQVPLYVATKMASIRKSSFFVPSADTYARAAIRHIGYEPRCTPYWPHSVMWFLISILPES
Sbjct: 61 CQVPLYVATKMASIRKSSFFVPSADTYARAAIRHIGYEPRCTPYWPHSVMWFLISILPES 120
Query: 121 LIDSIRLGMCI 131
LIDSIRLGMCI
Sbjct: 121 LIDSIRLGMCI 131
>Os04g0483500 Similar to B-keto acyl reductase
Length = 318
Score = 230 bits (586), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 104/131 (79%), Positives = 119/131 (90%)
Query: 1 AVLPAMVERKRGAIVNIGSGSSSVMPSDPLYSVYAATKAYVDQFSRCLYVEYKSKGIDVQ 60
AVLP MVERKRGAIVNIGSG+SS++PS PLYSVYAATKAYVDQFSRCLYVEYK+KGIDVQ
Sbjct: 172 AVLPGMVERKRGAIVNIGSGASSILPSYPLYSVYAATKAYVDQFSRCLYVEYKNKGIDVQ 231
Query: 61 CQVPLYVATKMASIRKSSFFVPSADTYARAAIRHIGYEPRCTPYWPHSVMWFLISILPES 120
CQVPLY ATKMASI+K+SFF PS +TYARAA+R+IGYEPRCTPYWPH+V+WFLIS PE
Sbjct: 232 CQVPLYAATKMASIKKASFFAPSPETYARAAVRYIGYEPRCTPYWPHAVLWFLISAFPEP 291
Query: 121 LIDSIRLGMCI 131
++D + L M +
Sbjct: 292 IVDRLLLNMSV 302
>Os11g0432600 Similar to Beta-keto acyl reductase (Fragment)
Length = 339
Score = 179 bits (455), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 81/131 (61%), Positives = 107/131 (81%)
Query: 1 AVLPAMVERKRGAIVNIGSGSSSVMPSDPLYSVYAATKAYVDQFSRCLYVEYKSKGIDVQ 60
A++PAM + RGA+VN+GSGSS V+P+ PLY+VYAATKAYVDQ SR L+VEYK G+DVQ
Sbjct: 191 ALVPAMAAKGRGAVVNVGSGSSVVVPAFPLYAVYAATKAYVDQLSRSLHVEYKHHGVDVQ 250
Query: 61 CQVPLYVATKMASIRKSSFFVPSADTYARAAIRHIGYEPRCTPYWPHSVMWFLISILPES 120
CQ+PLYVATKM+ ++ +S F+PS + YA+AA+R IGYEPRC PYW HS+ WF S+LP+S
Sbjct: 251 CQIPLYVATKMSPVQGNSPFIPSPEEYAKAAVRCIGYEPRCVPYWRHSIQWFFASLLPDS 310
Query: 121 LIDSIRLGMCI 131
+++ RL + I
Sbjct: 311 VLNLWRLQVGI 321
>Os04g0116600 Glucose/ribitol dehydrogenase family protein
Length = 319
Score = 130 bits (327), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/132 (52%), Positives = 86/132 (65%), Gaps = 5/132 (3%)
Query: 1 AVLPAMVERKRGAIVNIGSGSSSVMPSDPLYSVYAATKAYVDQFSRCLYVEYKSKGIDVQ 60
AVLPAM R RGAIVN+GSGS+ +PS PLY+VY++TK YV+Q S+ LYVEYK KGIDVQ
Sbjct: 174 AVLPAMARRGRGAIVNVGSGSTVAVPSFPLYTVYSSTKRYVEQLSKSLYVEYKGKGIDVQ 233
Query: 61 CQVPLYVATKM--ASIRKSSF---FVPSADTYARAAIRHIGYEPRCTPYWPHSVMWFLIS 115
QVP YV T M A+I+ FV +AD Y RAA R +G+ P + WFL +
Sbjct: 234 LQVPFYVHTNMLSAAIKDRMLLPAFVATADDYTRAAARWVGHGHIAVPDAGQQLQWFLAA 293
Query: 116 ILPESLIDSIRL 127
+P+ D RL
Sbjct: 294 FVPDFAHDWYRL 305
>Os06g0300000 Glucose/ribitol dehydrogenase family protein
Length = 365
Score = 129 bits (324), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 78/149 (52%), Positives = 93/149 (62%), Gaps = 22/149 (14%)
Query: 1 AVLPAMVERKRGAIVNIGSGSSSVMPSDPLYSVYAATKAYVDQFSRCLYVEYKSKGIDVQ 60
AVLP MV R RGA+VNIGSGS+ +PS PLYSVYAATK YV +FSR LYVEYKSKGIDVQ
Sbjct: 187 AVLPGMVARGRGAVVNIGSGSTEAIPSFPLYSVYAATKRYVAEFSRSLYVEYKSKGIDVQ 246
Query: 61 CQVPLYVATKMA-----------------SIRK-----SSFFVPSADTYARAAIRHIGYE 98
CQ PL+VAT M S R+ S FVP+AD YA AA R IG+
Sbjct: 247 CQAPLFVATNMTSGVAKAGGGGDDAAAKGSKRRQRRWLSPLFVPTADAYAAAAARWIGHG 306
Query: 99 PRCTPYWPHSVMWFLISILPESLIDSIRL 127
C P H + W + +P+++ D +RL
Sbjct: 307 AVCMPNLCHRLQWCVSRAVPDAVHDRVRL 335
>Os06g0300200
Length = 457
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/131 (54%), Positives = 84/131 (64%), Gaps = 4/131 (3%)
Query: 1 AVLPAMVERKRGAIVNIGSGSSSVMPSDPLYSVYAATKAYVDQFSRCLYVEYKSKGIDVQ 60
AVLP MV R RGA+VNIGS S+ +PS PLYSVYA TKAYV +FSR L VEYK KGIDVQ
Sbjct: 172 AVLPGMVMRGRGAVVNIGSASAEALPSFPLYSVYAGTKAYVGEFSRGLSVEYKRKGIDVQ 231
Query: 61 CQVPLYVATKMAS-IRKSSF---FVPSADTYARAAIRHIGYEPRCTPYWPHSVMWFLISI 116
CQVP V T M S K F FV + + YARAA+R IG+ C P H V +
Sbjct: 232 CQVPCLVETNMISRAMKDIFLSQFVVTPEEYARAAVRSIGHGRMCVPNMAHRVQLLGMRS 291
Query: 117 LPESLIDSIRL 127
P+ +++ RL
Sbjct: 292 TPDFVLNWYRL 302
>Os06g0299100 Glucose/ribitol dehydrogenase family protein
Length = 329
Score = 121 bits (304), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 69/136 (50%), Positives = 89/136 (65%), Gaps = 9/136 (6%)
Query: 1 AVLPAMVERKRG-AIVNIGSGSSSVMPSDPLYSVYAATKAYVDQFSRCLYVEYKSKGIDV 59
AVLP MVER RG A+VN+GS +S +PS PLY++YA+TK YV QFSR L+VEY +KGI V
Sbjct: 185 AVLPGMVERGRGGAVVNLGSAASEAIPSFPLYTMYASTKRYVAQFSRSLHVEYANKGIHV 244
Query: 60 QCQVPLYVATKMASIRKSSFFVP------SADTYARAAIRHIGY-EPRCTP-YWPHSVMW 111
QCQ P +V T M + + + S DTYARAA+ IG P CTP H +MW
Sbjct: 245 QCQTPFFVETTMLAKLEEEVGLSVSPLKVSTDTYARAAVAWIGRGGPLCTPGGLLHQLMW 304
Query: 112 FLISILPESLIDSIRL 127
+ + +PES++D I L
Sbjct: 305 CITAAVPESVLDWIVL 320
>Os06g0299300 Glucose/ribitol dehydrogenase family protein
Length = 330
Score = 115 bits (287), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/132 (49%), Positives = 82/132 (62%), Gaps = 6/132 (4%)
Query: 2 VLPAMVERKRGAIVNIGSGSSSVMPSDPLYSVYAATKAYVDQFSRCLYVEYKSKGIDVQC 61
VLP MV R RGAIVNIGS S +P+ PLY++YAATK YV QFSR L+VEY SKGI VQC
Sbjct: 184 VLPGMVSRGRGAIVNIGSAGSEYIPTLPLYTMYAATKRYVAQFSRSLHVEYASKGIHVQC 243
Query: 62 QVPLYVATKM-----ASIRKSSFFVPSADTYARAAIRHIGY-EPRCTPYWPHSVMWFLIS 115
Q P +V T++ + S F + D YARAA+ IG CTP H ++ + +
Sbjct: 244 QAPFFVDTRLMFRFEEAAGGVSLFTVTPDAYARAAVAWIGRGGALCTPAVRHQLLRRMAA 303
Query: 116 ILPESLIDSIRL 127
P+S+ D I L
Sbjct: 304 AAPDSVHDWILL 315
>Os06g0299200 Glucose/ribitol dehydrogenase family protein
Length = 296
Score = 109 bits (272), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/137 (46%), Positives = 85/137 (62%), Gaps = 7/137 (5%)
Query: 1 AVLPAMVERKRG-AIVNIGSGSSSVMPSDPLYSVYAATKAYVDQFSRCLYVEYKSKGIDV 59
AVLP MV R RG A+VNIGS +S +PS PLY++Y++TK YV QFSR L+VEY SKGI V
Sbjct: 148 AVLPGMVARGRGGAVVNIGSAASESIPSLPLYTMYSSTKRYVAQFSRSLHVEYASKGIHV 207
Query: 60 QCQVPLYVATKM-----ASIRKSSFFVPSADTYARAAIRHIGY-EPRCTPYWPHSVMWFL 113
QCQ P V T++ + S F + D YARAA+ IG CTP H ++ +
Sbjct: 208 QCQAPFLVDTRLMFRFEEAAGGVSLFTVTPDAYARAAVAWIGRGGALCTPGVRHQLLRRM 267
Query: 114 ISILPESLIDSIRLGMC 130
+ +P+S+ D I L +
Sbjct: 268 AAAVPDSVHDWILLHLT 284
>Os06g0298700 Glucose/ribitol dehydrogenase family protein
Length = 345
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 55/94 (58%), Gaps = 14/94 (14%)
Query: 1 AVLPAMVERKRGAIVNIGSGSSSVMPSDPLYSVYAATKAYVDQFSRCLYVEYKSKGIDVQ 60
AVLP MVER RGA+VNIGS SS +PS PL ++Y+ATK +V R ++ S
Sbjct: 184 AVLPGMVERGRGAVVNIGSASSQAIPSFPLCTIYSATKRHV----RGSFLPEPSP----- 234
Query: 61 CQVPLYVATKM----ASIRKSSFFVPSADTYARA 90
+ P +VAT+M A R+ S F + YARA
Sbjct: 235 -RAPFFVATRMVENLAEARRLSPFTVTPGAYARA 267
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.135 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,237,319
Number of extensions: 153719
Number of successful extensions: 427
Number of sequences better than 1.0e-10: 10
Number of HSP's gapped: 418
Number of HSP's successfully gapped: 10
Length of query: 147
Length of database: 17,035,801
Length adjustment: 91
Effective length of query: 56
Effective length of database: 12,284,327
Effective search space: 687922312
Effective search space used: 687922312
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 151 (62.8 bits)