BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0558100 Os02g0558100|AK066353
(659 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0558100 Similar to C1C-Nt1 protein 1108 0.0
AK066027 983 0.0
Os12g0438600 Similar to Chloride channel protein CLC-a (AtC... 522 e-148
Os04g0644800 Cl- channel, voltage gated family protein 199 6e-51
Os03g0695700 Similar to Chloride channel protein CLC-d (AtC... 167 2e-41
AK110503 160 3e-39
Os01g0876100 Cl- channel, voltage gated family protein 132 8e-31
>Os02g0558100 Similar to C1C-Nt1 protein
Length = 659
Score = 1108 bits (2865), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/659 (84%), Positives = 557/659 (84%)
Query: 1 SYAKGKCRYLTAFFAYGGCNLVLXXXXXXXXXXXXXXXXGSGIPEVKAYLNGVDAYSILA 60
SYAKGKCRYLTAFFAYGGCNLVL GSGIPEVKAYLNGVDAYSILA
Sbjct: 1 SYAKGKCRYLTAFFAYGGCNLVLAAAAAAICAYIAPAAAGSGIPEVKAYLNGVDAYSILA 60
Query: 61 PSTLFVKIFGSILGVSAGFVLGKEGPMVHTGACIANLLGQGGSRKYRLTCNWLRYFKNDR 120
PSTLFVKIFGSILGVSAGFVLGKEGPMVHTGACIANLLGQGGSRKYRLTCNWLRYFKNDR
Sbjct: 61 PSTLFVKIFGSILGVSAGFVLGKEGPMVHTGACIANLLGQGGSRKYRLTCNWLRYFKNDR 120
Query: 121 DRRDLITCGSXXXXXXXXXXXXXXXLFALEEAASWWRSALLWRXXXXXXXXXXXLRSLIE 180
DRRDLITCGS LFALEEAASWWRSALLWR LRSLIE
Sbjct: 121 DRRDLITCGSAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRAFFTTAVVAVVLRSLIE 180
Query: 181 FCRSGKCGLFGQGGLIMFDLSSTVATYSTPDXXXXXXXXXXXXXXXXXXXXXXDKVLRVY 240
FCRSGKCGLFGQGGLIMFDLSSTVATYSTPD DKVLRVY
Sbjct: 181 FCRSGKCGLFGQGGLIMFDLSSTVATYSTPDLIAIIILGIIGGIFGGLFNFLLDKVLRVY 240
Query: 241 SIINERGAPFKXXXXXXXXXXXXMCSYGLPWLAACTPCPVDAVEQCPTIGRSGNFKNFQC 300
SIINERGAPFK MCSYGLPWLAACTPCPVDAVEQCPTIGRSGNFKNFQC
Sbjct: 241 SIINERGAPFKILLTITISIITSMCSYGLPWLAACTPCPVDAVEQCPTIGRSGNFKNFQC 300
Query: 301 PPGHYNDLASLFFNTNDDAIRNLFSNGTESEFHMSTLFIFFTAVYCLGILTYGVAVPSGL 360
PPGHYNDLASLFFNTNDDAIRNLFSNGTESEFHMSTLFIFFTAVYCLGILTYGVAVPSGL
Sbjct: 301 PPGHYNDLASLFFNTNDDAIRNLFSNGTESEFHMSTLFIFFTAVYCLGILTYGVAVPSGL 360
Query: 361 FIPVILAGATYGRIVGTLLGSISDLDPXXXXXXXXXXXXXXTMRMTVSVCVILLELTNDX 420
FIPVILAGATYGRIVGTLLGSISDLDP TMRMTVSVCVILLELTND
Sbjct: 361 FIPVILAGATYGRIVGTLLGSISDLDPGLFALLGAASFLGGTMRMTVSVCVILLELTNDL 420
Query: 421 XXXXXXXXXXXISKTIADNFNKGVYDQIVVMKGLPYMEAHAEPYMRHLVAGDVVSGPLIT 480
ISKTIADNFNKGVYDQIVVMKGLPYMEAHAEPYMRHLVAGDVVSGPLIT
Sbjct: 421 AMLPLVMLVLLISKTIADNFNKGVYDQIVVMKGLPYMEAHAEPYMRHLVAGDVVSGPLIT 480
Query: 481 FSGVEKVGNIVHALRFTGHNGFPVVDEPPLTEAPELVGLVTRSHLLVLLNGKMFMKDQLK 540
FSGVEKVGNIVHALRFTGHNGFPVVDEPPLTEAPELVGLVTRSHLLVLLNGKMFMKDQLK
Sbjct: 481 FSGVEKVGNIVHALRFTGHNGFPVVDEPPLTEAPELVGLVTRSHLLVLLNGKMFMKDQLK 540
Query: 541 TSGSFVLQRFGAFDFAKPGSGKGLKIQDLDFTDEEMEMYVDLHPVTNTSPYTVVETMSLA 600
TSGSFVLQRFGAFDFAKPGSGKGLKIQDLDFTDEEMEMYVDLHPVTNTSPYTVVETMSLA
Sbjct: 541 TSGSFVLQRFGAFDFAKPGSGKGLKIQDLDFTDEEMEMYVDLHPVTNTSPYTVVETMSLA 600
Query: 601 KAAILFRALGLRHLLVVPKTPDRPPIVGILTRHDFVEEHIHGLFPNLNPHKFHSTSMGG 659
KAAILFRALGLRHLLVVPKTPDRPPIVGILTRHDFVEEHIHGLFPNLNPHKFHSTSMGG
Sbjct: 601 KAAILFRALGLRHLLVVPKTPDRPPIVGILTRHDFVEEHIHGLFPNLNPHKFHSTSMGG 659
>AK066027
Length = 773
Score = 983 bits (2542), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/642 (75%), Positives = 515/642 (80%)
Query: 6 KCRYLTAFFAYGGCNLVLXXXXXXXXXXXXXXXXGSGIPEVKAYLNGVDAYSILAPSTLF 65
K RY TAF AYGGCNLVL GSGIPEVKAYLNGVDAYSILAPSTLF
Sbjct: 128 KQRYFTAFLAYGGCNLVLATTAAAICAYIAPAAAGSGIPEVKAYLNGVDAYSILAPSTLF 187
Query: 66 VKIFGSILGVSAGFVLGKEGPMVHTGACIANLLGQGGSRKYRLTCNWLRYFKNDRDRRDL 125
VKIFGSILGVSAGFVLGKEGPMVHTGACIANLLGQGGSRKY LT NWLRYFKNDRDRRDL
Sbjct: 188 VKIFGSILGVSAGFVLGKEGPMVHTGACIANLLGQGGSRKYHLTWNWLRYFKNDRDRRDL 247
Query: 126 ITCGSXXXXXXXXXXXXXXXLFALEEAASWWRSALLWRXXXXXXXXXXXLRSLIEFCRSG 185
ITCGS LFALEEAASWWRSALLWR LR LIEFCRSG
Sbjct: 248 ITCGSAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAVVAVVLRGLIEFCRSG 307
Query: 186 KCGLFGQGGLIMFDLSSTVATYSTPDXXXXXXXXXXXXXXXXXXXXXXDKVLRVYSIINE 245
KCGLFGQGGLIMFDLSST+ TY+ D D++LR YSIINE
Sbjct: 308 KCGLFGQGGLIMFDLSSTIPTYTAQDVVAIIVLGIIGGVFGGLFNFLLDRILRAYSIINE 367
Query: 246 RGAPFKXXXXXXXXXXXXMCSYGLPWLAACTPCPVDAVEQCPTIGRSGNFKNFQCPPGHY 305
RG PFK CSYGLPWLA CTPCP DA E+CPTIGRSGNFKNFQCPPGHY
Sbjct: 368 RGPPFKILLTMIISIITSACSYGLPWLAPCTPCPADAAEECPTIGRSGNFKNFQCPPGHY 427
Query: 306 NDLASLFFNTNDDAIRNLFSNGTESEFHMSTLFIFFTAVYCLGILTYGVAVPSGLFIPVI 365
N LASLFFNTNDDAIRNLFS+GTE EFHMSTLF+FFTA+YCLG++TYG+AVPSGLFIPVI
Sbjct: 428 NGLASLFFNTNDDAIRNLFSSGTEKEFHMSTLFVFFTAIYCLGLVTYGIAVPSGLFIPVI 487
Query: 366 LAGATYGRIVGTLLGSISDLDPXXXXXXXXXXXXXXTMRMTVSVCVILLELTNDXXXXXX 425
LAGATYGRIVGTLLG ISDLDP TMRMTVSVCVILLELTND
Sbjct: 488 LAGATYGRIVGTLLGPISDLDPGLFALLGAASFLGGTMRMTVSVCVILLELTNDLHMLPL 547
Query: 426 XXXXXXISKTIADNFNKGVYDQIVVMKGLPYMEAHAEPYMRHLVAGDVVSGPLITFSGVE 485
ISKTIAD+FNKGVYDQIVVMKGLP+MEAHAEP+MR+LVAGDVVSGPLITFSGVE
Sbjct: 548 VMLVLLISKTIADSFNKGVYDQIVVMKGLPFMEAHAEPFMRNLVAGDVVSGPLITFSGVE 607
Query: 486 KVGNIVHALRFTGHNGFPVVDEPPLTEAPELVGLVTRSHLLVLLNGKMFMKDQLKTSGSF 545
KVGNIVHALR TGHNGFPVVDEPP++EAPELVGLV RSHLLVLL G+ FMK+++KTSGSF
Sbjct: 608 KVGNIVHALRITGHNGFPVVDEPPVSEAPELVGLVLRSHLLVLLKGRSFMKEKVKTSGSF 667
Query: 546 VLQRFGAFDFAKPGSGKGLKIQDLDFTDEEMEMYVDLHPVTNTSPYTVVETMSLAKAAIL 605
VL+RFGAFDFAKPGSGKGLKI+DLD TDEE++MYVDLHP+TNTSPYTVVETMSLAKAA+L
Sbjct: 668 VLRRFGAFDFAKPGSGKGLKIEDLDLTDEELDMYVDLHPITNTSPYTVVETMSLAKAAVL 727
Query: 606 FRALGLRHLLVVPKTPDRPPIVGILTRHDFVEEHIHGLFPNL 647
FRALGLRHLLVVPKTP RPPIVGILTRHDF+ EHIHGLFPNL
Sbjct: 728 FRALGLRHLLVVPKTPGRPPIVGILTRHDFMHEHIHGLFPNL 769
>Os12g0438600 Similar to Chloride channel protein CLC-a (AtCLC-a)
Length = 707
Score = 522 bits (1344), Expect = e-148, Method: Compositional matrix adjust.
Identities = 293/654 (44%), Positives = 379/654 (57%), Gaps = 11/654 (1%)
Query: 3 AKGKCRYLTAFFAYGGCNLVLXXXXXXXXXXXXXXXXGSGIPEVKAYLNGVDAYSILAPS 62
A+ + +Y F + G N L G GIPE+KAYLNGVD ++
Sbjct: 57 ARPQEKYWAGFLYFAGVNFGLTFIAAMLCVVFAPTAAGPGIPEIKAYLNGVDTPNMFGAP 116
Query: 63 TLFVKIFGSILGVSAGFVLGKEGPMVHTGACIANLLGQGGSRKYRLTCNWLRYFKNDRDR 122
L VKI GSI VS+G LGKEGP+VH GAC+ANLL QGGS ++RL WLRYF NDRDR
Sbjct: 117 QLIVKIIGSICAVSSGLDLGKEGPLVHIGACLANLLSQGGSGRHRLRLRWLRYFDNDRDR 176
Query: 123 RDLITCGSXXXXXXXXXXXXXXXLFALEEAASWWRSALLWRXXXXXXXXXXXLRSLIEFC 182
RDLITCG+ LFALEE A+WWRSALLWR LR IE C
Sbjct: 177 RDLITCGASSGVCAAFRAPVGGVLFALEEVATWWRSALLWRTFFSTATVVVVLRGFIEVC 236
Query: 183 RSGKCGLFGQGGLIMFDLSSTVATYSTPDXXXXXXXXXXXXXXXXXXXXXXDKVLRVYSI 242
R+G+CGLFG+GGLI+FD+ Y D KVLRVY++
Sbjct: 237 RNGRCGLFGEGGLILFDVGDVAVRYHAGDLLPVTIVGVLGGVLGALYNHVLHKVLRVYNL 296
Query: 243 INERGAPFKXXXXXXXXXXXXMCSYGLPWLAACTPCPVDAVEQCPTIGRSGNFKNFQCPP 302
INE+G K Y P+ CTPC CPT+G+SGNFK F CP
Sbjct: 297 INEKGRAAKLALALAVCALTSALLYVTPFAVPCTPCDPAFGGACPTLGKSGNFKRFNCPE 356
Query: 303 GHYNDLASLFFNTNDDAIRNLFSNGTESEFHMSTLFIFFTAVYC-LGILTYGVAVPSGLF 361
GHYNDLA+L TN DA RN+FS GT EF + +L IFF AVYC LG+ T+G+AVPSGLF
Sbjct: 357 GHYNDLATLLHATNVDATRNIFSTGTAGEFRLDSLLIFF-AVYCVLGLFTFGIAVPSGLF 415
Query: 362 IPVILAGATYGRIVGTLLGSISDLDPXXXXXXXXXXXXXXTMRMTVSVCVILLELTNDXX 421
+P+IL G+ YGR+ +L + +D +MRMTVS+ VI LELTN+
Sbjct: 416 LPIILMGSAYGRVTALVLSRFARIDHGLYAVLGAAALMSGSMRMTVSLVVIFLELTNNLL 475
Query: 422 XXXXXXXXXXISKTIADNFNKGVYDQIVVMKGLPYMEAHAEPYMRHLVAGDVVSGP--LI 479
I+KT+ D FN +Y+ I+ +KGLP++EA EP+M+ L G++ + +
Sbjct: 476 LLPITMFVLLIAKTVGDAFNPSIYEIILDLKGLPFLEAKPEPWMKDLTVGELAAAKPRAV 535
Query: 480 TFSGVEKVGNIVHALRFTGHNGFPVVDEPPLTEAPELVGLVTRSHLLVLLNGKMFMKDQL 539
VE+V +V ALR T HNGFPV+D P EL GLV RSHL+ L + F+ ++
Sbjct: 536 ALQVVERVSTVVEALRATRHNGFPVLDR-PRPGVSELHGLVLRSHLVAALRKRWFLPERR 594
Query: 540 KTSGSFVLQRFGAFDFAKPGSGKGLKIQDLDFTDEEMEMYVDLHPVTNTSPYTVVETMSL 599
+T + F + + A G + +L+ + EEM MYVDLHP+TNT+PYTVVETMS+
Sbjct: 595 RTEEWEAREMFSSAELADKCGG----VDELEISPEEMGMYVDLHPLTNTTPYTVVETMSV 650
Query: 600 AKAAILFRALGLRHLLVVPK--TPDRPPIVGILTRHDFVEEHIHGLFPNLNPHK 651
AKA +LFR++ LRH+L++PK P+ PIVGILTR D + +I G FP+L +
Sbjct: 651 AKAVVLFRSVALRHMLIMPKFQGPEISPIVGILTRQDLIAHNILGAFPHLASKR 704
>Os04g0644800 Cl- channel, voltage gated family protein
Length = 201
Score = 199 bits (506), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 103/195 (52%), Positives = 120/195 (61%)
Query: 51 NGVDAYSILAPSTLFVKIFGSILGVSAGFVLGKEGPMVHTGACIANLLGQGGSRKYRLTC 110
NGVDA I + TL VKI G I VS+ +GK GP+VHTGACIA++LGQGGS KY LTC
Sbjct: 1 NGVDAPDIFSLKTLVVKIVGCIAAVSSSLHVGKAGPLVHTGACIASILGQGGSSKYHLTC 60
Query: 111 NWLRYFKNDRDRRDLITCGSXXXXXXXXXXXXXXXLFALEEAASWWRSALLWRXXXXXXX 170
WLRYFKNDRDRRDL+TCG+ LFALE +SWWRSALLWR
Sbjct: 61 KWLRYFKNDRDRRDLVTCGAGAGIAAAFRAPVGGVLFALEAVSSWWRSALLWRAFFTTAM 120
Query: 171 XXXXLRSLIEFCRSGKCGLFGQGGLIMFDLSSTVATYSTPDXXXXXXXXXXXXXXXXXXX 230
LR+LI+FC+S KCGLFG+GGLIMFD++S TY D
Sbjct: 121 VAVVLRALIDFCKSDKCGLFGKGGLIMFDVTSDYITYHLVDLPPVITLGVLGGVLGSLHN 180
Query: 231 XXXDKVLRVYSIINE 245
DKVLR+Y+ INE
Sbjct: 181 FFLDKVLRLYNFINE 195
>Os03g0695700 Similar to Chloride channel protein CLC-d (AtCLC-d)
Length = 269
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 137/232 (59%), Gaps = 5/232 (2%)
Query: 409 VCVILLELTNDXXXXXXXXXXXXISKTIADNFNKGVYDQIVVMKGLPYMEAHAEPYMRHL 468
+CVI++E+TN+ ISK + D FN+G+Y+ ++G+P +++ + MR++
Sbjct: 1 LCVIMVEITNNLKLLPLIMLVLLISKAVGDFFNEGLYEVQAQLRGIPLLDSRPKQVMRNM 60
Query: 469 VAGDVVSG-PLITFSGVEKVGNIVHALRFTGHNGFPVVDEPPLTEAPELVGLVTRSHLLV 527
A D +++ V ++ +I+ LR HNGFPVVD E+ ++GL+ RSHLLV
Sbjct: 61 SAKDACKNQKVVSLPRVSRIVDIISVLRSNKHNGFPVVDRGQNGES-LVIGLILRSHLLV 119
Query: 528 LLNGKMFMKDQLKTSGSFVLQRFGAFDFAKPGSGKGLKIQDLDFTDEEMEMYVDLHPVTN 587
LL K+ ++ G +L R DF KP S KG I D+ T++E+ +Y+DL P N
Sbjct: 120 LLQSKVDFQNSPFPCGPGILNRHNTSDFVKPASSKGKSIDDIHLTEDELGLYLDLAPFLN 179
Query: 588 TSPYTVVETMSLAKAAILFRALGLRHLLVVPKTPDRPPIVGILTRHDFVEEH 639
SPY V E MSLAK LFR LGLRH+ VVP+ P R +VG++TR D + E
Sbjct: 180 PSPYIVPEDMSLAKVYNLFRQLGLRHIFVVPR-PSR--VVGLITRQDLLLEE 228
>AK110503
Length = 800
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 139/583 (23%), Positives = 241/583 (41%), Gaps = 44/583 (7%)
Query: 72 ILGVSAGFVLGKEGPMVHTGACIANLLGQGGSRKYRLTCNW-LRYFKNDRDRRDLITCGS 130
+ V++ + G++ P++H GA I + Q + ++ L F+N+RDRRD I+ G+
Sbjct: 2 VAAVTSSLMAGQD-PLIHIGAVIGGWVSQARTGFLKIDAALKLHVFRNERDRRDFISIGT 60
Query: 131 XXXXXXXXXXXXXXXLFALEEAASWWRSALLWRXXXXXXXXXXXLRSLIEFCRSG----K 186
F +EE S+W W + F SG K
Sbjct: 61 ACGMASIFNGPFGGTFFVVEEVGSFWN----WETTAQMFFACVMSTATANFWVSGITYGK 116
Query: 187 CGLFGQGGLIMFDL--SSTVATYSTPDXXXXXXXXXXXXXXXXXXXXXXDKVLRVYSIIN 244
G+F +++F++ S+T Y R Y I
Sbjct: 117 WGVFDPRAIVVFNIGTSTTFYMYELVLFAIVGATGGLLGGCFVQGMLKIQTWRRKY--IV 174
Query: 245 ERGAPFKXXXXXXXXXXXXMCSYGLPWLAACTPCPVDAVEQCPTIGRSGNFKNFQCPPGH 304
R F + + LP++ AC P +E T G F++ +C G
Sbjct: 175 HRWQKFTEMVLILTSTCLTL--FVLPYVFACAPTYHTPLETTATFGMYNPFRH-ECNSGE 231
Query: 305 YNDLASLFFNTNDDAIRNLFSNGTESEFHMSTLFIFFTAVYCLGILTYGVAVPSGLFIPV 364
YN+ A+L + I++L S + ++ F + + ++T G V +GL P+
Sbjct: 232 YNEFATLAMQGQINTIKHLVSRDVPDMYSIAVTFTYGLWAFGFLLITSGATVAAGLVTPI 291
Query: 365 ILAGATYGRIVGTLLGSI---SDLDPXXXXXXXXXXXXXXTMRMTVSVCVILLELTNDXX 421
L GA GR+ G + + S +DP MRM V V ++E+T+D
Sbjct: 292 WLVGAVMGRLWGEIFLWMFPGSGIDPGVYAVVGAGAMMSGVMRMIVCVVAFMIEVTSDLQ 351
Query: 422 XXXXXXXXXXISKTIADNFNKGVYDQIVVMKGLPYMEAH---AEPYMRHLVAGDVVSGPL 478
+S++IA+ F + +++ + K +P++ + + + A D++S P+
Sbjct: 352 FVLPVIVAALVSRSIANRFGQSMFNTFIAFKNIPFLPPEPVTSNALLNKMRAYDIMSRPV 411
Query: 479 ITFSGVEKVGNIVHALRFTGHNGFPVVDEPPLTEAPELVGLVTRSHLLVLLNGKMFMKDQ 538
+ +V + + + T H GFPV EL GL++R LL+LL K++
Sbjct: 412 VALPVHCRVADALRVCQKTTHQGFPVTRGS--KRGGELTGLISRKFLLILLKHKIWRDPT 469
Query: 539 LKTSGS--FVLQRFGAFDFAKPGSGKGLKIQDL--DFTDEEMEMYVDLHPVTNTSPYTVV 594
L T F++Q+ K L + ++ + TD++ E ++DL N +P V
Sbjct: 470 LYTGRDYHFMMQK------------KILSVDEVKAELTDDDREQWLDLRAFMNRAPTRVH 517
Query: 595 ETMSLAKAAILFRALGLRHLLVVPKTPDRPPIVGILTRHDFVE 637
E + A +FR LGLRHL P + VGI+TR + +E
Sbjct: 518 ENTNAALTYRIFRLLGLRHL---PVINHQNKCVGIVTRKNLLE 557
>Os01g0876100 Cl- channel, voltage gated family protein
Length = 93
Score = 132 bits (332), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 63/93 (67%), Positives = 69/93 (74%)
Query: 63 TLFVKIFGSILGVSAGFVLGKEGPMVHTGACIANLLGQGGSRKYRLTCNWLRYFKNDRDR 122
L+++I GSI GVSAGFVLGKEGPMVHTGAC+A+ LGQGGSRKY T NWLRYFKND DR
Sbjct: 1 ALYLQIVGSIFGVSAGFVLGKEGPMVHTGACVASFLGQGGSRKYGFTWNWLRYFKNDLDR 60
Query: 123 RDLITCGSXXXXXXXXXXXXXXXLFALEEAASW 155
RDLITCG+ LFALEEA SW
Sbjct: 61 RDLITCGAAAGVTAAFRAPVGGVLFALEEATSW 93
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.141 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 19,998,636
Number of extensions: 782465
Number of successful extensions: 1196
Number of sequences better than 1.0e-10: 7
Number of HSP's gapped: 1167
Number of HSP's successfully gapped: 7
Length of query: 659
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 552
Effective length of database: 11,448,903
Effective search space: 6319794456
Effective search space used: 6319794456
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 159 (65.9 bits)