BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0539100 Os02g0539100|AK120285
(802 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0539100 Similar to Digalactosyldiacylglycerol synthase 1 1423 0.0
Os11g0158400 Similar to Digalactosyldiacylglycerol synthase 1 910 0.0
Os03g0268300 Similar to Digalactosyldiacylglycerol synthase 2 563 e-160
Os03g0214400 Similar to Digalactosyldiacylglycerol synthase 2 556 e-158
Os04g0416900 Similar to Digalactosyldiacylglycerol synthase 1 292 6e-79
>Os02g0539100 Similar to Digalactosyldiacylglycerol synthase 1
Length = 802
Score = 1423 bits (3683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 696/774 (89%), Positives = 696/774 (89%)
Query: 29 DASAALSFIYKGWREVRDSASADLRLMRARADSLRTLADRELEHLLXXXXXXXXXXXXXX 88
DASAALSFIYKGWREVRDSASADLRLMRARADSLRTLADRELEHLL
Sbjct: 29 DASAALSFIYKGWREVRDSASADLRLMRARADSLRTLADRELEHLLVSASTTVAAPAPPV 88
Query: 89 XXXXXXXXXXFVRNRIQPKISELRRQYAASGDWELGLGRRVLEGWVAXXXXRGATTARVD 148
FVRNRIQPKISELRRQYAASGDWELGLGRRVLEGWVA RGATTARVD
Sbjct: 89 AAGAPIAEVEFVRNRIQPKISELRRQYAASGDWELGLGRRVLEGWVAPPPPRGATTARVD 148
Query: 149 LSGITAIRNALVPEVXXXXXXXXXXXXXDXXXXXXXXXXXVVRMIRGGLKELERRSQSSG 208
LSGITAIRNALVPEV D VVRMIRGGLKELERRSQSSG
Sbjct: 149 LSGITAIRNALVPEVAGGGGASTAWWSGDEMEEEEEKEWEVVRMIRGGLKELERRSQSSG 208
Query: 209 EILGGIPGPSELVEKFKSRLKSFNMEPLGSKEVPPLDLTEIMANLVRQSGPFLDQLGLRR 268
EILGGIPGPSELVEKFKSRLKSFNMEPLGSKEVPPLDLTEIMANLVRQSGPFLDQLGLRR
Sbjct: 209 EILGGIPGPSELVEKFKSRLKSFNMEPLGSKEVPPLDLTEIMANLVRQSGPFLDQLGLRR 268
Query: 269 ELRDKLVETLYSRQNHXXXXXXXXXXXXXXTDELDLRIASVLQSTGYHTDDGLWNEPSKY 328
ELRDKLVETLYSRQNH TDELDLRIASVLQSTGYHTDDGLWNEPSKY
Sbjct: 269 ELRDKLVETLYSRQNHSLSADSSLLGDDNSTDELDLRIASVLQSTGYHTDDGLWNEPSKY 328
Query: 329 EVSDNKRHVAIVTTASLPWMTGTAVNPLFRAAYLARNSKQDVTLVVPWLCKSDQELVYPN 388
EVSDNKRHVAIVTTASLPWMTGTAVNPLFRAAYLARNSKQDVTLVVPWLCKSDQELVYPN
Sbjct: 329 EVSDNKRHVAIVTTASLPWMTGTAVNPLFRAAYLARNSKQDVTLVVPWLCKSDQELVYPN 388
Query: 389 SMTFSSPEEQETYIKKWLEERLGFESNFKISFYPGKFSKERRSIIPAGDTSQFISSREAD 448
SMTFSSPEEQETYIKKWLEERLGFESNFKISFYPGKFSKERRSIIPAGDTSQFISSREAD
Sbjct: 389 SMTFSSPEEQETYIKKWLEERLGFESNFKISFYPGKFSKERRSIIPAGDTSQFISSREAD 448
Query: 449 IAILEEPEHLNWYHHGNRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFLVKHINNWVTR 508
IAILEEPEHLNWYHHGNRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFLVKHINNWVTR
Sbjct: 449 IAILEEPEHLNWYHHGNRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFLVKHINNWVTR 508
Query: 509 AYCDKVLRLSAATQDLPKSIICNVHGVNPKFLKIGDKIMADRENGQQSFSKGAYFLGKMV 568
AYCDKVLRLSAATQDLPKSIICNVHGVNPKFLKIGDKIMADRENGQQSFSKGAYFLGKMV
Sbjct: 509 AYCDKVLRLSAATQDLPKSIICNVHGVNPKFLKIGDKIMADRENGQQSFSKGAYFLGKMV 568
Query: 569 WAKGYREXXXXXXXXXXXXQGFKLDVYGSGEDSQEVQSTAKKLNLNLNFFKGRDHADDSL 628
WAKGYRE QGFKLDVYGSGEDSQEVQSTAKKLNLNLNFFKGRDHADDSL
Sbjct: 569 WAKGYRELLDLLDKRKSDLQGFKLDVYGSGEDSQEVQSTAKKLNLNLNFFKGRDHADDSL 628
Query: 629 HGYKVFINPSISDVLCTATAEALAMGKFVICAEHPSNEFFMSFPNCLTYRTPEEFVARVN 688
HGYKVFINPSISDVLCTATAEALAMGKFVICAEHPSNEFFMSFPNCLTYRTPEEFVARVN
Sbjct: 629 HGYKVFINPSISDVLCTATAEALAMGKFVICAEHPSNEFFMSFPNCLTYRTPEEFVARVN 688
Query: 689 EAMAREPQPLTPEQRYNLSWEAATERFMEYSDLDKVLSQPVTEGVHRSKTRRTIQSNLSD 748
EAMAREPQPLTPEQRYNLSWEAATERFMEYSDLDKVLSQPVTEGVHRSKTRRTIQSNLSD
Sbjct: 689 EAMAREPQPLTPEQRYNLSWEAATERFMEYSDLDKVLSQPVTEGVHRSKTRRTIQSNLSD 748
Query: 749 AMDGGLAFAHHCLTGSEVLRLATGAIPGTRDYDKQHCVDMGLLPPQVQHPVYGW 802
AMDGGLAFAHHCLTGSEVLRLATGAIPGTRDYDKQHCVDMGLLPPQVQHPVYGW
Sbjct: 749 AMDGGLAFAHHCLTGSEVLRLATGAIPGTRDYDKQHCVDMGLLPPQVQHPVYGW 802
>Os11g0158400 Similar to Digalactosyldiacylglycerol synthase 1
Length = 736
Score = 910 bits (2352), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/629 (69%), Positives = 510/629 (81%), Gaps = 26/629 (4%)
Query: 190 VRMIRGGLKELERRSQSSGEILGGIPGPSELVEKFKSRLKSFNMEPLGSKEVPPLDLTEI 249
+RM++ L+E+ERR Q ++++ K K LKS + P S+EVPPLDL E+
Sbjct: 118 IRMVKARLREMERRRQWQA---------TDMLHKVKLSLKSMSFVPEASEEVPPLDLGEL 168
Query: 250 MANLVRQSGPFLDQLGLRRELRDKLVETLYSRQ------NHXXXXXXXXXXXXXXTDELD 303
+A ++QSGP DQLG++R++ DKLVE+L S++ N DELD
Sbjct: 169 LAYFLKQSGPLFDQLGIKRDVCDKLVESLCSKRKDHLAYNSFPASEPSAFSNDNAGDELD 228
Query: 304 LRIASVLQSTGYHTDDGLWNEPSKYEVSDNKRHVAIVTTASLPWMTGTAVNPLFRAAYLA 363
LRIASV+QSTG++ + G WN+ KYE +D KRHVAIVTTASLPWMTGTAVNPLFRAAYLA
Sbjct: 229 LRIASVVQSTGHNYEGGFWNDGHKYETAD-KRHVAIVTTASLPWMTGTAVNPLFRAAYLA 287
Query: 364 RNSKQDVTLVVPWLCKSDQELVYPNSMTFSSPEEQETYIKKWLEERLGFESNFKISFYPG 423
++SKQDVTLVVPWLCKSDQELVYPNSMTFSSP+EQE Y++ WLEER+GF+++FKISFYPG
Sbjct: 288 KSSKQDVTLVVPWLCKSDQELVYPNSMTFSSPQEQEAYMRSWLEERVGFKTDFKISFYPG 347
Query: 424 KFSKERRSIIPAGDTSQFISSREADIAILEEPEHLNWYHHGNRWTDKFNHVVGVVHTNYL 483
KF KERRSIIPAGDTSQFI S+EADIAILEEPEHLNWYHHG RWTDKFNHVVGVVHTNYL
Sbjct: 348 KFQKERRSIIPAGDTSQFIPSKEADIAILEEPEHLNWYHHGKRWTDKFNHVVGVVHTNYL 407
Query: 484 EYIKREKNGALQAFLVKHINNWVTRAYCDKVLRLSAATQDLPKSIICNVHGVNPKFLKIG 543
EYIKREKNG +QAF VKHINN V RAYC KVLRLS ATQDLPKS+ICNVHGVNPKFL++G
Sbjct: 408 EYIKREKNGVIQAFFVKHINNLVARAYCHKVLRLSGATQDLPKSMICNVHGVNPKFLEVG 467
Query: 544 DKIMADRENGQQSFSKGAYFLGKMVWAKGYREXXXXXXXXXXXXQGFKLDVYGSGEDSQE 603
++I A+RE+GQ SFSKGAYFLGKMVWAKGYRE +G KLD+YG+GEDS E
Sbjct: 468 ERIAAERESGQHSFSKGAYFLGKMVWAKGYRELIDLYAKHKSDLEGIKLDIYGNGEDSHE 527
Query: 604 VQSTAKKLNLNLNFFKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVICAEHP 663
VQS A KLNLNLNF KGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFV+CA+HP
Sbjct: 528 VQSAAMKLNLNLNFHKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHP 587
Query: 664 SNEFFMSFPNCLTYRTPEEFVARVNEAMAREPQPLTPEQRYNLSWEAATERFMEYSDLDK 723
SN+FF SFPNCLTY+T E+FVA+V EAMAR+PQPLTPEQRYNLSWEAAT+RFME+S+LDK
Sbjct: 588 SNDFFRSFPNCLTYKTSEDFVAKVKEAMARDPQPLTPEQRYNLSWEAATQRFMEHSELDK 647
Query: 724 VLSQP------VTEGVHRSKTRRTIQS----NLSDAMDGGLAFAHHCLTGSEVLRLATGA 773
VLS T G +S + +S N+SD +DGGLAFAH+C TG+E+LRL+TGA
Sbjct: 648 VLSSSNRDCTTSTSGCGKSGDNKMEKSASLPNMSDMVDGGLAFAHYCFTGNELLRLSTGA 707
Query: 774 IPGTRDYDKQHCVDMGLLPPQVQHPVYGW 802
IPGT +Y+KQH +D+ LLPPQVQ+PVYGW
Sbjct: 708 IPGTLNYNKQHSLDLHLLPPQVQNPVYGW 736
>Os03g0268300 Similar to Digalactosyldiacylglycerol synthase 2
Length = 463
Score = 563 bits (1450), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/457 (57%), Positives = 331/457 (72%), Gaps = 3/457 (0%)
Query: 334 KRHVAIVTTASLPWMTGTAVNPLFRAAYLARNSKQDVTLVVPWLCKSDQELVYPNSMTFS 393
K+H+AI TTASLPWMTGTAVNPLFRAAYLA+ +VTLVVPWL K DQ LVYPN M FS
Sbjct: 4 KQHIAIFTTASLPWMTGTAVNPLFRAAYLAKAGDWEVTLVVPWLSKGDQLLVYPNKMKFS 63
Query: 394 SPEEQETYIKKWLEERLGFESNFKISFYPGKFSKERRSIIPAGDTSQFISSREADIAILE 453
P EQE Y+++WLEER+G F+I FYPGKFS E+RSI+PAGD +Q +S +ADIA+LE
Sbjct: 64 VPGEQEGYVRRWLEERIGLLPKFEIKFYPGKFSTEKRSILPAGDITQTVSDDKADIAVLE 123
Query: 454 EPEHLNWYHHGNRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFLVKHINNWVTRAYCDK 513
EPEHL WYHHG RW +KF V+GVVHTNYLEY+KRE+NG + AFL+KHIN+WVT YC K
Sbjct: 124 EPEHLTWYHHGRRWKNKFRKVIGVVHTNYLEYVKRERNGYIHAFLLKHINSWVTDIYCHK 183
Query: 514 VLRLSAATQDLPKSIICNVHGVNPKFLKIGDKIMADRENGQQSFSKGAYFLGKMVWAKGY 573
V+RLSAATQ++P+SI+CNVHGVNPKF++IG +Q+F KGAY++GKMVW+KGY
Sbjct: 184 VIRLSAATQEVPRSIVCNVHGVNPKFIEIGKLKHQQISQREQAFFKGAYYIGKMVWSKGY 243
Query: 574 REXXXXXXXXXXXXQGFKLDVYGSGEDSQEVQSTAKKLNLNLNFFKGRDHADDSLHGYKV 633
E G K+++YGSGEDS EV+++A+KLNL++ + GRDH D H YKV
Sbjct: 244 TELLQLLQKHQKELSGLKMELYGSGEDSDEVKASAEKLNLDVRVYPGRDHGDSIFHDYKV 303
Query: 634 FINPSISDVLCTATAEALAMGKFVICAEHPSNEFFMSFPNCLTYRTPEEFVARVNEAMAR 693
FINPS +DV+CT TAEALAMGK VICA HPSNEFF FPNC Y T +EFV +A+A
Sbjct: 304 FINPSTTDVVCTTTAEALAMGKIVICANHPSNEFFKRFPNCHMYNTEKEFVRLTMKALAE 363
Query: 694 EPQPLTPEQRYNLSWEAATERFMEYSDLDKVLSQPVTEGVHRSKTRRTIQSN-LSDAMDG 752
EP PL+ E R+ LSWEAATERF+ +D+ ++S + + + I + L M+
Sbjct: 364 EPIPLSEELRHELSWEAATERFVRVADIAPIMS--IKQHSPSPQYFMYISPDELKKNMEE 421
Query: 753 GLAFAHHCLTGSEVLRLATGAIPGTRDYDKQHCVDMG 789
AF H+ ++G E R GAIP T D+Q C ++G
Sbjct: 422 ASAFFHNAISGFETARCVFGAIPNTLQPDEQQCKELG 458
>Os03g0214400 Similar to Digalactosyldiacylglycerol synthase 2
Length = 476
Score = 556 bits (1432), Expect = e-158, Method: Compositional matrix adjust.
Identities = 259/464 (55%), Positives = 331/464 (71%), Gaps = 6/464 (1%)
Query: 333 NKRHVAIVTTASLPWMTGTAVNPLFRAAYLARNSKQDVTLVVPWLCKSDQELVYPNSMTF 392
+RH+A+ TTASLPWMTGTA+NPLFRAAYLA++ ++VTLV+PWL DQELVYPN + F
Sbjct: 3 TRRHLAVFTTASLPWMTGTAINPLFRAAYLAKDGDREVTLVIPWLSLRDQELVYPNKIVF 62
Query: 393 SSPEEQETYIKKWLEERLGFESNFKISFYPGKFSKERRSIIPAGDTSQFISSREADIAIL 452
SP E E Y+++W+EER+ F +F I FYP KFSKE RSI+P GD ++ I AD+A+L
Sbjct: 63 GSPLEHEAYVRRWIEERISFRPSFSIKFYPAKFSKELRSILPVGDITECIPDEVADVAVL 122
Query: 453 EEPEHLNWYHHGNRWTDKFNHVVGVVHTNYLEYIKREKNGALQAFLVKHINNWVTRAYCD 512
EEPEHLNWYHHG +W +KF V+GVVHTNY+ Y+KREKNG A +K++N WVTR YC
Sbjct: 123 EEPEHLNWYHHGRKWKNKFRRVIGVVHTNYIAYVKREKNGQAIACFMKYMNTWVTRIYCH 182
Query: 513 KVLRLSAATQDLPKSIICNVHGVNPKFLKIGDKIMADRENGQQSFSKGAYFLGKMVWAKG 572
K++RLS ATQDLP+S++CNVHGVNPKFL++G + NG+ +F+KGAY++GKMVW+KG
Sbjct: 183 KIIRLSGATQDLPRSVVCNVHGVNPKFLEVGKLKLKQLRNGEIAFTKGAYYIGKMVWSKG 242
Query: 573 YREXXXXXXXXXXXXQGFKLDVYGSGEDSQEVQSTAKKLNLNLNFFKGRDHADDSLHGYK 632
YRE G ++D+YGSGEDS EV+ +A+ L+L + GRDHAD H YK
Sbjct: 243 YRELLDLLSKYQSKLVGLEVDLYGSGEDSDEVRKSAELLSLAVKVHPGRDHADPLFHDYK 302
Query: 633 VFINPSISDVLCTATAEALAMGKFVICAEHPSNEFFMSFPNCLTYRTPEEFVARVNEAMA 692
VFINPS +DV+CT TAEALAMGK VICA HPSNEFF FPNC TY + EEFV +A+A
Sbjct: 303 VFINPSTTDVVCTTTAEALAMGKIVICANHPSNEFFKQFPNCRTYDSGEEFVQLTLDALA 362
Query: 693 REPQPLTPEQRYNLSWEAATERFMEYSDLDKVLS-QP---VTEGVHRSKTRRTIQSNLSD 748
+P PLT Q ++LSWEAATERFME ++L+ +S +P T V RT L
Sbjct: 363 EQPAPLTDMQSHDLSWEAATERFMEAAELNLPISAEPRIHQTSKVSLPAFMRT--RKLKQ 420
Query: 749 AMDGGLAFAHHCLTGSEVLRLATGAIPGTRDYDKQHCVDMGLLP 792
+++ + H L+G EV R A GA+P T D+Q C D+GL P
Sbjct: 421 SLEDASVYLHQALSGLEVTRRAFGAVPKTLQPDEQLCNDLGLAP 464
>Os04g0416900 Similar to Digalactosyldiacylglycerol synthase 1
Length = 204
Score = 292 bits (748), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 137/176 (77%), Positives = 153/176 (86%), Gaps = 4/176 (2%)
Query: 631 YKVFINPSISDVLCTATAEALAMGKFVICAEHPSNEFFMSFPNCLTYRTPEEFVARVNEA 690
YKVFINPS+SDVLCTATAEALAMGKFVICA+HPSNEFF SFPNCLTY+T EEFVARV EA
Sbjct: 29 YKVFINPSVSDVLCTATAEALAMGKFVICADHPSNEFFKSFPNCLTYKTSEEFVARVKEA 88
Query: 691 MAREPQPLTPEQRYNLSWEAATERFMEYSDLDKVLSQPV---TEGVHRSKTRRT-IQSNL 746
MA EP PLTPEQRY+LSWEAATERFMEYS+LDKVL+ + + RSK R+ + L
Sbjct: 89 MASEPSPLTPEQRYSLSWEAATERFMEYSELDKVLNNKIGYSGQDGKRSKVRKIPLLPRL 148
Query: 747 SDAMDGGLAFAHHCLTGSEVLRLATGAIPGTRDYDKQHCVDMGLLPPQVQHPVYGW 802
S+ +DGGLAFAHHCLTG+E+LRLATGAIPGTRDYDKQ C+D+ LLPPQVQHPVYGW
Sbjct: 149 SEVVDGGLAFAHHCLTGNEILRLATGAIPGTRDYDKQQCMDLNLLPPQVQHPVYGW 204
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 23,736,513
Number of extensions: 923275
Number of successful extensions: 1960
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 1949
Number of HSP's successfully gapped: 5
Length of query: 802
Length of database: 17,035,801
Length adjustment: 109
Effective length of query: 693
Effective length of database: 11,344,475
Effective search space: 7861721175
Effective search space used: 7861721175
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 160 (66.2 bits)