BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0526000 Os02g0526000|AK071231
(376 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0526000 Conserved hypothetical protein 769 0.0
Os04g0404900 Conserved hypothetical protein 623 e-179
Os11g0543500 Conserved hypothetical protein 529 e-150
Os05g0155700 Conserved hypothetical protein 406 e-113
Os01g0931100 Conserved hypothetical protein 320 1e-87
Os11g0245600 236 2e-62
>Os02g0526000 Conserved hypothetical protein
Length = 376
Score = 769 bits (1985), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/376 (100%), Positives = 376/376 (100%)
Query: 1 MIIVDDAGAFLPALNHSPWDGVTIADFVMPFFLFMVGISLTLAYKRVPDKLEATKKAVLR 60
MIIVDDAGAFLPALNHSPWDGVTIADFVMPFFLFMVGISLTLAYKRVPDKLEATKKAVLR
Sbjct: 1 MIIVDDAGAFLPALNHSPWDGVTIADFVMPFFLFMVGISLTLAYKRVPDKLEATKKAVLR 60
Query: 61 ALKLFCLGLVLQGGFFHGVRSLTFGVDITKIRLMGILQRIAIAYLLAAICEIWLKGDDDV 120
ALKLFCLGLVLQGGFFHGVRSLTFGVDITKIRLMGILQRIAIAYLLAAICEIWLKGDDDV
Sbjct: 61 ALKLFCLGLVLQGGFFHGVRSLTFGVDITKIRLMGILQRIAIAYLLAAICEIWLKGDDDV 120
Query: 121 DCGLDVIRRYRYQLVVALLLSTMYTVILNGVYVPDWEYQISGPGSTEKSFSVRCGVRGDT 180
DCGLDVIRRYRYQLVVALLLSTMYTVILNGVYVPDWEYQISGPGSTEKSFSVRCGVRGDT
Sbjct: 121 DCGLDVIRRYRYQLVVALLLSTMYTVILNGVYVPDWEYQISGPGSTEKSFSVRCGVRGDT 180
Query: 181 GPACNAVGMLDRTILGIDHLYRRPVYARTKQCSINYPQNGPLPPDAPSWCQAPFDPEGLL 240
GPACNAVGMLDRTILGIDHLYRRPVYARTKQCSINYPQNGPLPPDAPSWCQAPFDPEGLL
Sbjct: 181 GPACNAVGMLDRTILGIDHLYRRPVYARTKQCSINYPQNGPLPPDAPSWCQAPFDPEGLL 240
Query: 241 SSVMAIVTCLIGLQFGHIIIHFEKHKGRIINWLIPSFSMLALAFSMDFIGIRMNKPLYTI 300
SSVMAIVTCLIGLQFGHIIIHFEKHKGRIINWLIPSFSMLALAFSMDFIGIRMNKPLYTI
Sbjct: 241 SSVMAIVTCLIGLQFGHIIIHFEKHKGRIINWLIPSFSMLALAFSMDFIGIRMNKPLYTI 300
Query: 301 SYALATSGAAGLLFAGIYTLVDVYGFRKLTIPMEWMGKHALMIYVLVACNILPIFIHGFY 360
SYALATSGAAGLLFAGIYTLVDVYGFRKLTIPMEWMGKHALMIYVLVACNILPIFIHGFY
Sbjct: 301 SYALATSGAAGLLFAGIYTLVDVYGFRKLTIPMEWMGKHALMIYVLVACNILPIFIHGFY 360
Query: 361 WREPKNNLLKFIGVGA 376
WREPKNNLLKFIGVGA
Sbjct: 361 WREPKNNLLKFIGVGA 376
>Os04g0404900 Conserved hypothetical protein
Length = 447
Score = 623 bits (1606), Expect = e-179, Method: Compositional matrix adjust.
Identities = 301/376 (80%), Positives = 339/376 (90%)
Query: 1 MIIVDDAGAFLPALNHSPWDGVTIADFVMPFFLFMVGISLTLAYKRVPDKLEATKKAVLR 60
MI+VDDAGAFLPA+NHSPWDGVT+ADFVMPFFLF+VG++L LAYKRVP+KLEAT+KA+LR
Sbjct: 72 MILVDDAGAFLPAINHSPWDGVTLADFVMPFFLFIVGVALALAYKRVPNKLEATRKAILR 131
Query: 61 ALKLFCLGLVLQGGFFHGVRSLTFGVDITKIRLMGILQRIAIAYLLAAICEIWLKGDDDV 120
ALKLFC+GLVLQGGFFHGVRSLTFG+D+ KIRLMGILQRIAIAY++ A+CEIWLKGDDDV
Sbjct: 132 ALKLFCVGLVLQGGFFHGVRSLTFGIDMEKIRLMGILQRIAIAYIVTALCEIWLKGDDDV 191
Query: 121 DCGLDVIRRYRYQLVVALLLSTMYTVILNGVYVPDWEYQISGPGSTEKSFSVRCGVRGDT 180
D G D+++R RYQL + L++ Y L G YVPDWEY+IS PGSTEKSF V+C VRGDT
Sbjct: 192 DSGFDLLKRNRYQLFIGLIVMITYMGFLYGTYVPDWEYRISVPGSTEKSFFVKCSVRGDT 251
Query: 181 GPACNAVGMLDRTILGIDHLYRRPVYARTKQCSINYPQNGPLPPDAPSWCQAPFDPEGLL 240
GP CNAVGM+DR ILGI HLY RPVYAR+KQCSIN PQNGPL PDAPSWCQAPFDPEGLL
Sbjct: 252 GPGCNAVGMIDRKILGIQHLYCRPVYARSKQCSINSPQNGPLRPDAPSWCQAPFDPEGLL 311
Query: 241 SSVMAIVTCLIGLQFGHIIIHFEKHKGRIINWLIPSFSMLALAFSMDFIGIRMNKPLYTI 300
SSVMAIVTCLIGLQ+GH+I+HF+KHK RI+ WLIPSFSML LAFS+DF G+ MNKPLYT+
Sbjct: 312 SSVMAIVTCLIGLQYGHVIVHFQKHKERIMKWLIPSFSMLILAFSLDFFGMHMNKPLYTV 371
Query: 301 SYALATSGAAGLLFAGIYTLVDVYGFRKLTIPMEWMGKHALMIYVLVACNILPIFIHGFY 360
SYALAT+GAAGLLFAGIY LVD+YG R+ T MEWMG HALMIYVL+ACNILPIFIHGFY
Sbjct: 372 SYALATAGAAGLLFAGIYALVDMYGHRRPTAVMEWMGTHALMIYVLIACNILPIFIHGFY 431
Query: 361 WREPKNNLLKFIGVGA 376
WREPKNNLL+ IGVGA
Sbjct: 432 WREPKNNLLRLIGVGA 447
>Os11g0543500 Conserved hypothetical protein
Length = 448
Score = 529 bits (1363), Expect = e-150, Method: Compositional matrix adjust.
Identities = 242/379 (63%), Positives = 304/379 (80%), Gaps = 3/379 (0%)
Query: 1 MIIVDDAGAFLPALNHSPWDGVTIADFVMPFFLFMVGISLTLAYKRVPDKLEATKKAVLR 60
MI+VDD G +PA++HSPWDGVT+ADFV PFFLF+VG+SL AYK+VPDK+ ATKKA+LR
Sbjct: 70 MILVDDVGGIVPAISHSPWDGVTLADFVFPFFLFIVGVSLAFAYKKVPDKMLATKKAMLR 129
Query: 61 ALKLFCLGLVLQGGFFHGVRSLTFGVDITKIRLMGILQRIAIAYLLAAICEIWLK---GD 117
A+KLF +GL+LQGGFFHG+ LT+GVDI KIRLMG+LQRIAIAYL+ A+CEIWL+
Sbjct: 130 AVKLFIVGLILQGGFFHGIHELTYGVDIRKIRLMGVLQRIAIAYLVVALCEIWLRRVSSG 189
Query: 118 DDVDCGLDVIRRYRYQLVVALLLSTMYTVILNGVYVPDWEYQISGPGSTEKSFSVRCGVR 177
++ G +I RY +Q+ V L+L Y VIL G++VPDWEY+++ P ST K F V+CGV+
Sbjct: 190 GNIGSGSMLITRYHHQMFVGLVLVVTYLVILYGLHVPDWEYEVTSPDSTVKHFLVKCGVK 249
Query: 178 GDTGPACNAVGMLDRTILGIDHLYRRPVYARTKQCSINYPQNGPLPPDAPSWCQAPFDPE 237
GDTGP CNAVGM+DR++LGI HLY PVY +T+QCS+ P+NGPLPP+APSWC+APFDPE
Sbjct: 250 GDTGPGCNAVGMIDRSVLGIQHLYAHPVYLKTEQCSMASPRNGPLPPNAPSWCEAPFDPE 309
Query: 238 GLLSSVMAIVTCLIGLQFGHIIIHFEKHKGRIINWLIPSFSMLALAFSMDFIGIRMNKPL 297
GLLSS+MAIVTCLIGLQ GH+I+HF+KH RI W I S +L L FS+ G+ MNK L
Sbjct: 310 GLLSSLMAIVTCLIGLQIGHVIVHFKKHNERIKRWSILSLCLLTLGFSLHLFGLHMNKSL 369
Query: 298 YTISYALATSGAAGLLFAGIYTLVDVYGFRKLTIPMEWMGKHALMIYVLVACNILPIFIH 357
Y++SY T+G AGL F IY LVDV G+++ +PMEWMGKHALMI+VLVACN++P+ +
Sbjct: 370 YSLSYTCVTTGTAGLFFVAIYLLVDVKGYKRPVLPMEWMGKHALMIFVLVACNVIPVLVQ 429
Query: 358 GFYWREPKNNLLKFIGVGA 376
GFYW+EP NNLLK IG+G
Sbjct: 430 GFYWKEPSNNLLKLIGIGG 448
>Os05g0155700 Conserved hypothetical protein
Length = 491
Score = 406 bits (1044), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/380 (50%), Positives = 265/380 (69%), Gaps = 9/380 (2%)
Query: 1 MIIVDDAGAFLPALNHSPWDGVTIADFVMPFFLFMVGISLTLAYKRVPDKLEATKKAVLR 60
MI+VDDAG P +NHSPW GVT+ADFVMP FLF++G+S L +K+ P+K ATKKA +R
Sbjct: 69 MILVDDAGGAWPGMNHSPWLGVTVADFVMPAFLFIIGVSAALVFKKTPNKTVATKKAAIR 128
Query: 61 ALKLFCLGLVLQGGFFHGVRSLTFGVDITKIRLMGILQRIAIAYLLAAICEIWLKGDDDV 120
A+KLF LG++LQGG+ HG +LT+G+D+ IR +G+LQRIAI Y LAAI EIWL + V
Sbjct: 129 AIKLFILGVILQGGYIHGRHNLTYGIDLDHIRWLGVLQRIAIGYFLAAISEIWLVNNISV 188
Query: 121 DCGLDVIRRYRYQLVVALLLSTMYTVILNGVYVPDWEYQ---------ISGPGSTEKSFS 171
D + +++Y + +VA+++S +Y +L G+YV +WE++ I PG+
Sbjct: 189 DSAISFVKKYFMEWIVAVMISALYVGLLLGLYVSNWEFKVQTSNSILTIPTPGNEIGMKM 248
Query: 172 VRCGVRGDTGPACNAVGMLDRTILGIDHLYRRPVYARTKQCSINYPQNGPLPPDAPSWCQ 231
++CGVRG GP CNAVG +DR +LG +HLY+ PVY RTK+CS+N P GPLPP+AP WC
Sbjct: 249 IQCGVRGSLGPPCNAVGFVDRVLLGENHLYKNPVYKRTKECSVNSPDYGPLPPNAPDWCL 308
Query: 232 APFDPEGLLSSVMAIVTCLIGLQFGHIIIHFEKHKGRIINWLIPSFSMLALAFSMDFIGI 291
APFDPEGLLS++MA VTC +GL FGH+++H + H R++ WL+ S + F + +G+
Sbjct: 309 APFDPEGLLSTLMAAVTCFVGLHFGHVLVHCKDHSPRMLLWLLASTVLTVSGFLLQLLGM 368
Query: 292 RMNKPLYTISYALATSGAAGLLFAGIYTLVDVYGFRKLTIPMEWMGKHALMIYVLVACNI 351
+KPLYT+SY L T G +G L +Y +VDV +K I +WMG +AL++YVL AC I
Sbjct: 369 PFSKPLYTVSYMLLTGGVSGFLLLLLYYIVDVINIKKPFILFQWMGMNALIVYVLAACEI 428
Query: 352 LPIFIHGFYWREPKNNLLKF 371
P + GFYWR P+NNL+
Sbjct: 429 FPTLVQGFYWRSPENNLVDL 448
>Os01g0931100 Conserved hypothetical protein
Length = 488
Score = 320 bits (820), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 160/378 (42%), Positives = 242/378 (64%), Gaps = 6/378 (1%)
Query: 1 MIIVDDAGAFLPALNHSPWDGVTIADFVMPFFLFMVGISLTLAYKRVPDKLEATKKAVLR 60
MI+VD AG P + H+PW+G +ADFVMPFFLF+VG+++ L+ KR+PD+ A ++ VLR
Sbjct: 67 MILVDGAGGEWPVIGHAPWNGCNLADFVMPFFLFIVGMAIPLSLKRIPDRGRAVRRVVLR 126
Query: 61 ALKLFCLGLVLQGGFFHGVRSLTFGVDITKIRLMGILQRIAIAYLLAAICEIWLKG---D 117
LKL G++LQGG+ H L++GVD+ +R GILQRIA+AYL+ A+ EI K
Sbjct: 127 TLKLLFWGILLQGGYSHAPDDLSYGVDMKHVRWCGILQRIALAYLVVAVLEIVTKNAKVQ 186
Query: 118 DDVDCGLDVIRRYRYQLVVALLLSTMYTVILNGVYVPDWEYQISGPGSTE--KSFSVRCG 175
D G + R Y Q +VA + +Y ++ G+YVPDW++++S + K +V CG
Sbjct: 187 DQSSSGFSIFRMYFSQWIVACCILVIYLSLVYGIYVPDWDFRVSDVKNPNFGKILTVTCG 246
Query: 176 VRGDTGPACNAVGMLDRTILGIDHLYRRPVYARTKQCSINYPQNGPLPPDAPSWCQAPFD 235
RG P CNAVG +DR +LGI+H+Y RP + R K C+ + P GP D+P+WC APF+
Sbjct: 247 TRGKLSPPCNAVGYIDRKVLGINHMYHRPAWRRHKDCTDDSPHEGPFKTDSPAWCYAPFE 306
Query: 236 PEGLLSSVMAIVTCLIGLQFGHIIIHFEKHKGRIINWLIPSFSMLALAFSMDFI-GIRMN 294
PEGLLSS+ A+++ +IG+ +GH+++H + H R+ W I ++L L ++ F I +N
Sbjct: 307 PEGLLSSLSAVLSTIIGVHYGHVLVHMKSHTDRLKQWSIMGITLLILGLTLHFSHAIPLN 366
Query: 295 KPLYTISYALATSGAAGLLFAGIYTLVDVYGFRKLTIPMEWMGKHALMIYVLVACNILPI 354
K LYT SY T+GAAG++F Y LVD+ P++W G +A+++YV+ A I
Sbjct: 367 KQLYTFSYICVTAGAAGIVFCMFYFLVDILNLHYPFAPLKWTGMNAMLVYVMAAAGIFEG 426
Query: 355 FIHGFYWREPKNNLLKFI 372
F++G+Y+ N L+ ++
Sbjct: 427 FLNGWYYEGTNNTLVYWV 444
>Os11g0245600
Length = 447
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 141/386 (36%), Positives = 203/386 (52%), Gaps = 71/386 (18%)
Query: 1 MIIVDDAGAFLPALNHSPWDGVTIADFVMPFFLFMVGISLTLAYKRVPDKLEATKKAVLR 60
MI+VDDAG ++HSPW+G T+ADFVMPFFLF+VG+++ A KRVP A KK +R
Sbjct: 75 MILVDDAGGAYERMDHSPWNGCTLADFVMPFFLFIVGVAIAFALKRVPKLGAAVKKITIR 134
Query: 61 ALKLFCLGLVLQGGFFHGVRSLTFGVDITKIRLMGILQRIAIAYLLAAICEIWLKG--DD 118
LK+ GL+LQGG+ H L++GVD+ KIR GILQRIA+ Y + A+ E +
Sbjct: 135 TLKMLFWGLLLQGGYSHAPDDLSYGVDMKKIRWCGILQRIALVYFVVALIEAFTTKVRPT 194
Query: 119 DVDCG-LDVIRRYRYQLVVALLLSTMYTVILNGVYVPDWEYQISGPGSTE--KSFS---- 171
V G + YR+Q + + +Y V +YVPDW Y G K F+
Sbjct: 195 TVRSGPYAIFHAYRWQWLGGFVALFIYMVTTFSLYVPDWSYVYHNDGDVNDGKQFTVLLA 254
Query: 172 -----VRCGVRGDTGPACNAVGMLDRTILGIDHLYRRPVYARTKQCSINYPQNGPLPPDA 226
V+CGVRG PACNAVG +DR + GI+HLY +PV+ R+K I+ ++
Sbjct: 255 VFPDHVQCGVRGHLDPACNAVGYVDRVVWGINHLYTQPVWIRSKFNIIDSVRDN------ 308
Query: 227 PSWCQAPFDPEGLLSSVMAIVTCLIGLQFGHIIIHFEKHKGRIINWLIPSFSMLALAFSM 286
+DP + TC S
Sbjct: 309 -------WDP---------LWTC-----------------------------------SR 317
Query: 287 DFIGIRMNKPLYTISYALATSGAAGLLFAGIYTLVDVYGFRKLTIPMEWMGKHALMIYVL 346
F I +NK LY++SY T+GAAG++ + Y L+DV+G R + +EW+G +A++++VL
Sbjct: 318 SFQAIPINKQLYSLSYVCFTAGAAGVVLSAFYILIDVWGLRTPFLFLEWIGMNAMLVFVL 377
Query: 347 VACNILPIFIHGFYWREPKNNLLKFI 372
A I P F++G+Y+ P N L+ +I
Sbjct: 378 AAQAIFPAFVNGWYYDSPGNTLVSWI 403
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.329 0.145 0.464
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,978,603
Number of extensions: 545498
Number of successful extensions: 1404
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1397
Number of HSP's successfully gapped: 7
Length of query: 376
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 274
Effective length of database: 11,709,973
Effective search space: 3208532602
Effective search space used: 3208532602
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 157 (65.1 bits)