Os01g0931100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os01g0931100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 80.42 | 0.421 | 9.15 | -0.451 | 1.16 | 1.49 | 0.51 | 0.167 | 0.416 | 12.2 | 16.09 | 617 | -- | -- |
| 80.39 | 0.418 | 9.15 | -0.478 | 1.13 | 1.49 | 0.478 | -- | 0.407 | 12.1 | 16.3 | 586 | -- | -- |
| 81.35 | 0.42 | 9.15 | -0.471 | 1.13 | 1.52 | -- | -0.0363 | 0.404 | 12 | 16.2 | 578 | -- | -- |
| 81.35 | 0.42 | 9.15 | -0.464 | 1.12 | 1.51 | -- | -- | 0.405 | 12 | 16.24 | 574 | -- | -- |
| 106.89 | 0.482 | 9.16 | -0.353 | -- | 1.96 | -- | 1.14 | 0.384 | -- | 17.1 | 12 | -- | -- |
| 110.6 | 0.493 | 9.11 | -0.108 | 1.07 | -- | 0.714 | -- | 0.648 | 13.6 | -- | -- | -- | -- |
| 112.6 | 0.497 | 9.11 | -0.0854 | 1.07 | -- | -- | -- | 0.652 | 13.5 | -- | -- | -- | -- |
| 107.71 | 0.483 | 9.19 | -0.528 | -- | 1.97 | -- | -- | 0.323 | -- | 17.55 | 14 | -- | -- |
| 86.35 | 0.433 | 9.14 | -- | 1.1 | 1.3 | -- | -- | 0.484 | 12.2 | 16.6 | 557 | -- | -- |
| 182.62 | 0.631 | 9.12 | -0.128 | -- | -- | -- | -- | 0.629 | -- | -- | -- | -- | -- |
| 112.79 | 0.497 | 9.11 | -- | 1.07 | -- | -- | -- | 0.661 | 13.5 | -- | -- | -- | -- |
| 114.18 | 0.498 | 9.17 | -- | -- | 1.74 | -- | -- | 0.4 | -- | 18.9 | 11 | -- | -- |
| 183.05 | 0.632 | 9.12 | -- | -- | -- | -- | -- | 0.643 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.12 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 2 | 75.66 | temperature | 30 | 270 | < th | dose dependent | rect. | 8 | 20 |
| 7 | 76.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 18 |
| 11 | 77.06 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 13 |
| 34 | 77.88 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 20 |
| 98 | 79.30 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 99 | 79.35 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 21 |
| 109 | 79.54 | temperature | 15 | 720 | > th | dose dependent | sin | 9 | NA |
| 126 | 79.67 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 10 |
| 136 | 79.74 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 21 |
| 184 | 80.02 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 10 |
| 211 | 80.12 | temperature | 15 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 221 | 80.16 | temperature | 15 | 1440 | > th | dose dependent | rect. | 20 | 5 |
| 249 | 80.21 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 15 |
| 266 | 80.27 | temperature | 20 | 1440 | > th | dose dependent | sin | 13 | NA |
| 454 | 80.65 | temperature | 10 | 720 | > th | dose dependent | sin | 5 | NA |
| 469 | 80.68 | temperature | 30 | 1440 | < th | dose dependent | sin | 14 | NA |
| 530 | 80.81 | temperature | 30 | 720 | < th | dose dependent | rect. | 16 | 20 |
| 681 | 81.14 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 745 | 81.31 | temperature | 20 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 937 | 81.74 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 6 |