Os02g0526000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os02g0526000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 235.06 | 0.72 | 10.1 | -4.14 | 1.55 | -0.305 | 1.35 | -6.36 | -0.836 | 14.2 | 0.7092 | 17328 | -- | -- |
| 258.91 | 0.749 | 9.79 | -2.59 | 1.67 | -1.28 | 0.751 | -- | -0.278 | 14.3 | 9.99 | 4303 | -- | -- |
| 238.99 | 0.72 | 10.1 | -4.06 | 1.52 | -0.26 | -- | -6.54 | -0.812 | 14.2 | 0.6911 | 18490 | -- | -- |
| 258.11 | 0.748 | 9.79 | -2.6 | 1.64 | -1.31 | -- | -- | -0.229 | 14.3 | 9.96 | 13394 | -- | -- |
| 348.25 | 0.874 | 9.83 | -2.35 | -- | 0.919 | -- | 0.401 | -0.383 | -- | 0.7037 | 18490 | -- | -- |
| 289.05 | 0.797 | 9.82 | -2.28 | 1.58 | -- | 1.31 | -- | -0.348 | 14.2 | -- | -- | -- | -- |
| 295.43 | 0.805 | 9.82 | -2.25 | 1.58 | -- | -- | -- | -0.34 | 14.3 | -- | -- | -- | -- |
| 349.29 | 0.874 | 9.83 | -2.35 | -- | 0.922 | -- | -- | -0.385 | -- | 0.7037 | 18490 | -- | -- |
| 391.98 | 0.922 | 9.7 | -- | 1.4 | -1.01 | -- | -- | 0.165 | 13.8 | 12.56 | 1459 | -- | -- |
| 444.63 | 0.985 | 9.83 | -2.31 | -- | -- | -- | -- | -0.379 | -- | -- | -- | -- | -- |
| 428.47 | 0.968 | 9.76 | -- | 1.63 | -- | -- | -- | -0.09 | 14.3 | -- | -- | -- | -- |
| 494.96 | 1.04 | 9.78 | -- | -- | 0.9 | -- | -- | -0.124 | -- | 0.7037 | 18490 | -- | -- |
| 585.82 | 1.13 | 9.77 | -- | -- | -- | -- | -- | -0.122 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 223.89 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 4 | 224.03 | wind | 3.0 | 43200 | > th | dose independent | rect. | 13 | 2 |
| 8 | 224.35 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 22 | 224.62 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 45 | 225.15 | wind | 3.0 | 43200 | < th | dose independent | rect. | 13 | 2 |
| 162 | 226.37 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 9 | 2 |
| 198 | 226.52 | temperature | 15.0 | 43200 | > th | dose dependent | sin | 3 | NA |
| 201 | 226.53 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 226 | 226.63 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 8 | 4 |
| 234 | 226.66 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 240 | 226.67 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 8 | 4 |
| 257 | 226.74 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 8 | 1 |
| 272 | 226.78 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 7 | 4 |
| 278 | 226.80 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 22 | 6 |
| 288 | 226.82 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 313 | 226.90 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 346 | 226.99 | radiation | 10.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 375 | 227.04 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 18 | 21 |
| 504 | 227.25 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 6 | 10 |
| 545 | 227.29 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 6 | 10 |
| 578 | 227.33 | temperature | 15.0 | 43200 | > th | dose dependent | no | NA | NA |
| 631 | 227.43 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 4 | 2 |
| 663 | 227.48 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 4 | 2 |
| 666 | 227.48 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 4 | 2 |
| 792 | 227.67 | temperature | 30.0 | 43200 | < th | dose dependent | sin | 3 | NA |
| 840 | 227.74 | humidity | 70.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 913 | 227.82 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 23 | 15 |
| 929 | 227.84 | humidity | 70.0 | 43200 | > th | dose independent | rect. | 8 | 21 |
| 987 | 227.89 | humidity | 70.0 | 43200 | > th | dose independent | sin | 5 | NA |
| 991 | 227.89 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 4 | 3 |
| 1000 | 227.90 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 13 | 7 |