Os05g0155700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os05g0155700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.79 | 0.234 | 10.3 | -0.016 | 0.227 | -0.638 | 0.0123 | -0.687 | 0.258 | 20.6 | 27.19 | 31 | -- | -- |
| 24.84 | 0.232 | 10.2 | 0.0314 | 0.228 | -0.7 | 0.0151 | -- | 0.273 | 20.3 | 26.9 | 37 | -- | -- |
| 24.77 | 0.232 | 10.3 | -0.00961 | 0.23 | -0.636 | -- | -0.601 | 0.259 | 20.5 | 27 | 38 | -- | -- |
| 24.84 | 0.232 | 10.3 | 0.0404 | 0.227 | -0.693 | -- | -- | 0.27 | 20.4 | 26.9 | 37 | -- | -- |
| 27.43 | 0.245 | 10.2 | 0.000145 | -- | -0.633 | -- | -0.436 | 0.265 | -- | 26.9 | 27 | -- | -- |
| 31.31 | 0.262 | 10.3 | -0.0429 | 0.269 | -- | 0.1 | -- | 0.265 | 23.6 | -- | -- | -- | -- |
| 31.35 | 0.262 | 10.3 | -0.0468 | 0.269 | -- | -- | -- | 0.264 | 23.5 | -- | -- | -- | -- |
| 27.47 | 0.245 | 10.2 | 0.0353 | -- | -0.668 | -- | -- | 0.272 | -- | 26.9 | 16 | -- | -- |
| 24.88 | 0.232 | 10.3 | -- | 0.228 | -0.682 | -- | -- | 0.265 | 20.5 | 26.95 | 38 | -- | -- |
| 35.9 | 0.28 | 10.2 | -0.0395 | -- | -- | -- | -- | 0.267 | -- | -- | -- | -- | -- |
| 31.41 | 0.262 | 10.3 | -- | 0.269 | -- | -- | -- | 0.27 | 23.5 | -- | -- | -- | -- |
| 27.5 | 0.245 | 10.2 | -- | -- | -0.663 | -- | -- | 0.268 | -- | 26.9 | 16 | -- | -- |
| 35.94 | 0.28 | 10.2 | -- | -- | -- | -- | -- | 0.272 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.78 | temperature | 30 | 270 | > th | dose independent | rect. | 8 | 8 |
| 15 | 24.84 | temperature | 30 | 270 | < th | dose independent | sin | 3 | NA |
| 18 | 24.86 | temperature | 30 | 270 | > th | dose independent | sin | 3 | NA |
| 24 | 25.02 | temperature | 30 | 270 | < th | dose independent | rect. | 5 | 12 |
| 65 | 25.36 | temperature | 25 | 90 | > th | dose dependent | rect. | 7 | 15 |
| 70 | 25.38 | temperature | 25 | 270 | > th | dose dependent | sin | 2 | NA |
| 72 | 25.40 | temperature | 25 | 90 | > th | dose dependent | sin | 22 | NA |
| 73 | 25.40 | temperature | 25 | 90 | > th | dose dependent | rect. | 19 | 23 |
| 95 | 25.45 | temperature | 25 | 90 | > th | dose dependent | rect. | 3 | 19 |
| 105 | 25.48 | temperature | 25 | 270 | > th | dose dependent | rect. | 6 | 10 |
| 129 | 25.53 | humidity | 60 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 149 | 25.56 | temperature | 30 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 155 | 25.58 | humidity | 70 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 165 | 25.58 | temperature | 30 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 170 | 25.60 | humidity | 70 | 14400 | > th | dose independent | rect. | 12 | 6 |
| 172 | 25.60 | temperature | 30 | 10 | > th | dose dependent | no | NA | NA |
| 173 | 25.60 | temperature | 30 | 10 | > th | dose dependent | rect. | 9 | 10 |
| 287 | 25.62 | humidity | 70 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 288 | 25.62 | humidity | 70 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 291 | 25.62 | humidity | 70 | 14400 | < th | dose independent | rect. | 12 | 6 |
| 330 | 25.63 | temperature | 30 | 270 | > th | dose dependent | sin | 5 | NA |
| 335 | 25.63 | temperature | 30 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 340 | 25.64 | temperature | 25 | 90 | > th | dose dependent | rect. | 7 | 22 |
| 496 | 25.69 | humidity | 60 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 539 | 25.73 | temperature | 30 | 270 | < th | dose independent | rect. | 20 | 23 |
| 802 | 25.80 | humidity | 70 | 14400 | > th | dose independent | sin | 19 | NA |
| 819 | 25.81 | humidity | 70 | 14400 | < th | dose independent | sin | 19 | NA |