Os11g0543500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0543500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 144.42 | 0.565 | 10.6 | -2.12 | 1.05 | -1.28 | 1.18 | 3.6 | -1.32 | 23.2 | 93.83 | 297 | -- | -- |
| 153.49 | 0.577 | 10.6 | -2.07 | 1.01 | -1.18 | 1.26 | -- | -1.33 | 23.7 | 93.11 | 345 | -- | -- |
| 147.92 | 0.566 | 10.6 | -2.14 | 1.05 | -1.3 | -- | 4.73 | -1.3 | 22.8 | 94.35 | 219 | -- | -- |
| 158.29 | 0.586 | 10.6 | -2.17 | 1.02 | -1.42 | -- | -- | -1.32 | 22.7 | 94.57 | 289 | -- | -- |
| 198.81 | 0.657 | 10.6 | -1.89 | -- | -1.44 | -- | -0.605 | -1.43 | -- | 87.3 | 853 | -- | -- |
| 166.09 | 0.604 | 10.6 | -2.12 | 1.11 | -- | 0.869 | -- | -1.21 | 22.5 | -- | -- | -- | -- |
| 168.81 | 0.608 | 10.6 | -2.15 | 1.12 | -- | -- | -- | -1.21 | 22.2 | -- | -- | -- | -- |
| 192.84 | 0.647 | 10.6 | -2.07 | -- | -1.44 | -- | -- | -1.36 | -- | 76.86 | 866 | -- | -- |
| 273.02 | 0.77 | 10.6 | -- | 0.979 | -1.05 | -- | -- | -1.14 | 23.1 | 91.45 | 394 | -- | -- |
| 244.85 | 0.731 | 10.6 | -2.13 | -- | -- | -- | -- | -1.21 | -- | -- | -- | -- | -- |
| 290.49 | 0.797 | 10.5 | -- | 1.11 | -- | -- | -- | -0.975 | 22.1 | -- | -- | -- | -- |
| 297.67 | 0.804 | 10.6 | -- | -- | -1.67 | -- | -- | -1.25 | -- | 85.84 | 870 | -- | -- |
| 364.76 | 0.891 | 10.5 | -- | -- | -- | -- | -- | -0.976 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 139.93 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 5 | 18 |
| 2 | 140.03 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 5 | 14 |
| 14 | 141.59 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 17 | 141.72 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 3 | 14 |
| 36 | 142.28 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 9 |
| 42 | 142.44 | temperature | 10.0 | 30 | > th | dose dependent | sin | 22 | NA |
| 46 | 142.47 | temperature | 30.0 | 30 | < th | dose independent | sin | 21 | NA |
| 84 | 142.94 | temperature | 10.0 | 720 | > th | dose dependent | sin | 5 | NA |
| 119 | 143.21 | temperature | 30.0 | 720 | < th | dose independent | rect. | 21 | 16 |
| 121 | 143.22 | temperature | 30.0 | 720 | < th | dose independent | sin | 7 | NA |
| 125 | 143.24 | temperature | 30.0 | 30 | < th | dose independent | rect. | 11 | 14 |
| 181 | 143.73 | temperature | 20.0 | 720 | > th | dose independent | rect. | 5 | 10 |
| 244 | 144.15 | humidity | 70.0 | 720 | > th | dose dependent | rect. | 20 | 10 |
| 260 | 144.31 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 24 | 7 |
| 289 | 144.49 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 2 | 2 |
| 293 | 144.51 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 2 | 2 |
| 333 | 144.83 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 21 | 9 |
| 343 | 144.89 | temperature | 30.0 | 30 | < th | dose independent | rect. | 11 | 11 |
| 348 | 144.93 | atmosphere | 1010.0 | 270 | < th | dose dependent | rect. | 22 | 8 |
| 372 | 145.11 | humidity | 60.0 | 720 | > th | dose dependent | rect. | 19 | 7 |
| 407 | 145.28 | radiation | 30.0 | 270 | < th | dose dependent | rect. | 12 | 15 |
| 413 | 145.30 | temperature | 20.0 | 720 | > th | dose independent | rect. | 5 | 5 |
| 443 | 145.44 | radiation | 20.0 | 270 | < th | dose independent | rect. | 12 | 15 |
| 461 | 145.50 | temperature | 30.0 | 270 | < th | dose independent | rect. | 7 | 10 |
| 515 | 145.68 | temperature | 30.0 | 30 | < th | dose independent | rect. | 11 | 16 |
| 533 | 145.77 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 9 | 14 |
| 558 | 145.85 | temperature | 20.0 | 720 | > th | dose independent | sin | 0 | NA |
| 584 | 145.95 | temperature | 30.0 | 720 | < th | dose independent | rect. | 23 | 15 |
| 596 | 145.99 | wind | 1.0 | 720 | > th | dose independent | rect. | 23 | 15 |
| 613 | 146.02 | humidity | 90.0 | 270 | > th | dose dependent | rect. | 14 | 16 |
| 624 | 146.08 | wind | 1.0 | 720 | > th | dose independent | rect. | 23 | 20 |
| 645 | 146.15 | humidity | 90.0 | 270 | > th | dose dependent | sin | 12 | NA |
| 668 | 146.25 | wind | 1.0 | 720 | > th | dose independent | sin | 4 | NA |
| 679 | 146.29 | temperature | 30.0 | 720 | < th | dose independent | rect. | 2 | 9 |
| 680 | 146.29 | temperature | 30.0 | 270 | < th | dose independent | rect. | 8 | 13 |
| 692 | 146.32 | wind | 1.0 | 720 | > th | dose independent | rect. | 24 | 18 |
| 709 | 146.36 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 18 | 17 |
| 714 | 146.36 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 18 | 17 |
| 725 | 146.42 | humidity | 60.0 | 30 | > th | dose independent | rect. | 11 | 14 |
| 794 | 146.61 | humidity | 60.0 | 10 | > th | dose independent | sin | 10 | NA |
| 816 | 146.68 | radiation | 30.0 | 720 | < th | dose independent | rect. | 17 | 16 |
| 869 | 146.84 | humidity | 60.0 | 720 | > th | dose dependent | sin | 12 | NA |
| 874 | 146.86 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 7 |
| 878 | 146.87 | wind | 1.0 | 720 | > th | dose independent | sin | 18 | NA |
| 879 | 146.87 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 880 | 146.87 | radiation | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 889 | 146.89 | humidity | 90.0 | 720 | > th | dose dependent | rect. | 20 | 5 |
| 906 | 146.95 | temperature | 30.0 | 30 | < th | dose independent | rect. | 11 | 18 |
| 981 | 147.12 | wind | 1.0 | 720 | > th | dose independent | rect. | 2 | 17 |