BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0314100 Os02g0314100|AB112771
(450 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0314100 Calcium/proton exchanger family protein 716 0.0
Os01g0557500 Cation/proton exchanger 1a 384 e-107
Os05g0594200 Similar to Cation/proton exchanger 1a 356 2e-98
Os03g0397400 Similar to Low affinity calcium transporter CA... 236 2e-62
Os04g0653200 Similar to Low affinity calcium transporter CA... 228 9e-60
AK072134 119 4e-27
>Os02g0314100 Calcium/proton exchanger family protein
Length = 450
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 365/411 (88%), Positives = 365/411 (88%)
Query: 40 WTPSSSSSMTGRKIKSEASPLLRRLLGGPAAQLQEVLLGTKLYPLFSAVPLAVAAESLRL 99
WTPSSSSSMTGRKIKSEASPLLRRLLGGPAAQLQEVLLGTKLYPLFSAVPLAVAAESLRL
Sbjct: 40 WTPSSSSSMTGRKIKSEASPLLRRLLGGPAAQLQEVLLGTKLYPLFSAVPLAVAAESLRL 99
Query: 100 GRVWVFAFSLIGLAPLAERVSFLSEHIANTVGPTAGGIMNATCGNVPELIIALFALHKNK 159
GRVWVFAFSLIGLAPLAERVSFLSEHIANTVGPTAGGIMNATCGNVPELIIALFALHKNK
Sbjct: 100 GRVWVFAFSLIGLAPLAERVSFLSEHIANTVGPTAGGIMNATCGNVPELIIALFALHKNK 159
Query: 160 MEILKWXXXXXXXXXXXXXXXXXXXXXXIVNIGKERPLDKRQADVSIGLLLLGVLCHIAT 219
MEILKW IVNIGKERPLDKRQADVSIGLLLLGVLCHIAT
Sbjct: 160 MEILKWSLLGSILSNLLLVLGSSLLFGGIVNIGKERPLDKRQADVSIGLLLLGVLCHIAT 219
Query: 220 LVSKYTXXXXXXXXXXXVMQLSRSCAIVMLIAYFGSLMFQLKTHRQIFELXXXXXXXXXX 279
LVSKYT VMQLSRSCAIVMLIAYFGSLMFQLKTHRQIFEL
Sbjct: 220 LVSKYTSSTGDSINSSSVMQLSRSCAIVMLIAYFGSLMFQLKTHRQIFELEEDSSDSSSS 279
Query: 280 XXXATDKSVIGFASAMVWLIGMAVVTAMLSSYVVTTIEEASESMGIPVRFISIILLPIVG 339
ATDKSVIGFASAMVWLIGMAVVTAMLSSYVVTTIEEASESMGIPVRFISIILLPIVG
Sbjct: 280 EDDATDKSVIGFASAMVWLIGMAVVTAMLSSYVVTTIEEASESMGIPVRFISIILLPIVG 339
Query: 340 NAAEHAGAIIFAFKNKIDISLGITLGSATQISMLVVPVILIVSWVNAIPMDLDFNLLETG 399
NAAEHAGAIIFAFKNKIDISLGITLGSATQISMLVVPVILIVSWVNAIPMDLDFNLLETG
Sbjct: 340 NAAEHAGAIIFAFKNKIDISLGITLGSATQISMLVVPVILIVSWVNAIPMDLDFNLLETG 399
Query: 400 SLAMAVITTAFTLQDDKWHYLKGLNLVFSYIVIAVCFFVMKALPTLKKEDD 450
SLAMAVITTAFTLQDDKWHYLKGLNLVFSYIVIAVCFFVMKALPTLKKEDD
Sbjct: 400 SLAMAVITTAFTLQDDKWHYLKGLNLVFSYIVIAVCFFVMKALPTLKKEDD 450
>Os01g0557500 Cation/proton exchanger 1a
Length = 451
Score = 384 bits (986), Expect = e-107, Method: Compositional matrix adjust.
Identities = 214/408 (52%), Positives = 264/408 (64%), Gaps = 13/408 (3%)
Query: 41 TPSSSSSMTGRKIKSEASPLLRRLLGGPA----AQLQEVLLGTKLYPLFSAVPLAVAAES 96
T + SS + RK KS+A+ L+R++ P A LQEV L TKL LF AVPLA+AA+
Sbjct: 24 TAHNMSSSSLRK-KSDAA-LVRKVPVAPLRPLLANLQEVFLATKLAVLFPAVPLAIAAQC 81
Query: 97 LRLGRVWVFAFSLIGLAPLAERVSFLSEHIANTVGPTAGGIMNATCGNVPELIIALFALH 156
R +VWVFA SL+GL PLAERVSFL+E IA GPT GG++NATCGN ELIIALFAL
Sbjct: 82 FRFDQVWVFALSLLGLIPLAERVSFLTEQIALYTGPTVGGLLNATCGNATELIIALFALL 141
Query: 157 KNKMEILKWXXXXXXXXXXXXXXXXXXXXXXIVNIGKERPLDKRQADVSIGLLLLGVLCH 216
K K+E++K +VN+G +P D+ Q+DVS LL L VLCH
Sbjct: 142 KGKIEVVKCSLLGSVLSNLLLVLGTSLFCGGVVNLGARQPYDRNQSDVSTALLFLAVLCH 201
Query: 217 IATLVSKYTXXX----XXXXXXXXVMQLSRSCAIVMLIAYFGSLMFQLKTHRQIFELXXX 272
A L+ +Y + LSR+C+ VML +Y L FQLKTHRQ+FE
Sbjct: 202 SAPLLLRYAVAAGEHSVSATSAAASLDLSRACSFVMLASYVAYLFFQLKTHRQLFE---P 258
Query: 273 XXXXXXXXXXATDKSVIGFASAMVWLIGMAVVTAMLSSYVVTTIEEASESMGIPVRFISI 332
++ +GFASA+ WL M V ++LS YVV TIE S+S G+ V FISI
Sbjct: 259 QEVDGGDAGDDDEEPALGFASALFWLALMTAVISVLSEYVVGTIEPTSQSWGLSVSFISI 318
Query: 333 ILLPIVGNAAEHAGAIIFAFKNKIDISLGITLGSATQISMLVVPVILIVSWVNAIPMDLD 392
ILLPIVGNAAEHAGAIIFA KNK+DI+LG+ LGSATQISM VVP+ ++V+W+ + MDLD
Sbjct: 319 ILLPIVGNAAEHAGAIIFALKNKLDITLGVALGSATQISMFVVPLSVLVAWIMGVQMDLD 378
Query: 393 FNLLETGSLAMAVITTAFTLQDDKWHYLKGLNLVFSYIVIAVCFFVMK 440
F LLETGSL MAV+ TAFTLQD HYLKG+ L+ YIVI CFFV +
Sbjct: 379 FKLLETGSLFMAVLVTAFTLQDGTSHYLKGILLLLCYIVIGACFFVAR 426
>Os05g0594200 Similar to Cation/proton exchanger 1a
Length = 453
Score = 356 bits (914), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 208/383 (54%), Positives = 257/383 (67%), Gaps = 7/383 (1%)
Query: 61 LRRLLGGPAAQLQEVLLGTKLYPLFSAVPLAVAAESLRLGRVWVFAFSLIGLAPLAERVS 120
LR LL A L +VLL T+L+ LF AV LA+AA L G+VWVF SLIGL PLAER+S
Sbjct: 58 LRSLL----ANLNDVLLTTRLFLLFPAVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLS 113
Query: 121 FLSEHIANTVGPTAGGIMNATCGNVPELIIALFALHKNKMEILKWXXXXXXXXXXXXXXX 180
FL+E IA GPT GG++NAT GNV E+IIAL AL + K+E++K
Sbjct: 114 FLTEQIAFYTGPTVGGLLNATFGNVTEVIIALLALREGKIEVVKCSLLGSILSNLLLVLG 173
Query: 181 XXXXXXXIVNIGKERPLDKRQADVSIGLLLLGVLCHIATLVSKY--TXXXXXXXXXXXVM 238
I N+ +P D +QA V+ LL+L VLCH L+ +Y T +
Sbjct: 174 TSLFLAGIANLRAHQPYDTKQAHVNTALLMLAVLCHSLPLMLRYAVTSGDHAIVSGDAAL 233
Query: 239 QLSRSCAIVMLIAYFGSLMFQLKTHRQIFELXXXXXXXXXXXXXATDKS-VIGFASAMVW 297
LSR+C+I+MLIAY L FQL THRQ+FE A D V+GF+SAM+W
Sbjct: 234 HLSRACSILMLIAYLAYLFFQLNTHRQLFEPQQVEDDDDDDLVIAQDDEPVLGFSSAMIW 293
Query: 298 LIGMAVVTAMLSSYVVTTIEEASESMGIPVRFISIILLPIVGNAAEHAGAIIFAFKNKID 357
L M ++TA+LS YVV+TIE ASES + V FISIILLPIVGNAAEHAGA+IFA KNK+D
Sbjct: 294 LALMTLLTALLSGYVVSTIEAASESWELSVSFISIILLPIVGNAAEHAGAVIFALKNKMD 353
Query: 358 ISLGITLGSATQISMLVVPVILIVSWVNAIPMDLDFNLLETGSLAMAVITTAFTLQDDKW 417
I+LG++LGSATQISM VVPV +IV+W IPMDLDFNLLETGSL +A++ TAFTLQ+ +
Sbjct: 354 ITLGVSLGSATQISMFVVPVSVIVAWTMGIPMDLDFNLLETGSLFLAILVTAFTLQEGES 413
Query: 418 HYLKGLNLVFSYIVIAVCFFVMK 440
HYLKGL LV Y VI+VCFFV++
Sbjct: 414 HYLKGLILVLCYAVISVCFFVIR 436
>Os03g0397400 Similar to Low affinity calcium transporter CAX2 (Fragment)
Length = 437
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 139/365 (38%), Positives = 207/365 (56%), Gaps = 5/365 (1%)
Query: 75 VLLGTKLYPLFSAVPLAVAAESLRLG-RVWVFAFSLIGLAPLAERVSFLSEHIANTVGPT 133
V+L K+ L PLAV L + WVF FSLIG+ PLAER+ + +E +A GPT
Sbjct: 67 VILQAKINVLLPFGPLAVMLHYLSANHQGWVFLFSLIGITPLAERLGYATEQLALYTGPT 126
Query: 134 AGGIMNATCGNVPELIIALFALHKNKMEILKWXXXXXXXXXXXXXXXXXXXXXXIVNIGK 193
GG++NAT GN E+II+L+AL + +++ +V+ +
Sbjct: 127 IGGLLNATFGNATEMIISLYALKNGMIRVVQQSLLGSILSNMLLVLGCAFFAGGLVHPSR 186
Query: 194 ERPLDKRQADVSIGLLLLGVLCHIATLVSKYTXXXXXXXXXXXVMQLSRSCAIVMLIAYF 253
++ +K A V+ GLLL+ VL + V +T + LSR + +ML+AY
Sbjct: 187 DQVFNKASAVVNSGLLLMAVLGLMFPAVLHFTHSEVQYGKSE--VSLSRFSSCIMLVAYA 244
Query: 254 GSLMFQLKTHRQIFELXXXXXXXXXXXXXATDKSVIGFASAMVWLIGMAVVTAMLSSYVV 313
L FQLK+ R ++ ++ I A+ WL + + ++LS Y+V
Sbjct: 245 SYLFFQLKSQRSLYS--PIGEQEEEVTEDEEEEKEITQGEAICWLFVLTIWISILSGYLV 302
Query: 314 TTIEEASESMGIPVRFISIILLPIVGNAAEHAGAIIFAFKNKIDISLGITLGSATQISML 373
I+ ASES+ +PV FIS+ILLPIVGNAAEHA AI+FA K+K+DI+LG+ +GS+TQISM
Sbjct: 303 DAIQGASESLNMPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITLGVAIGSSTQISMF 362
Query: 374 VVPVILIVSWVNAIPMDLDFNLLETGSLAMAVITTAFTLQDDKWHYLKGLNLVFSYIVIA 433
V+P +++ W+ MDL+F L ET +L + V+ AF LQ+ +Y KGL L+ Y+++A
Sbjct: 363 VIPFCVVIGWIMGQQMDLNFQLFETATLFITVLVVAFMLQEGTSNYFKGLMLILCYLIVA 422
Query: 434 VCFFV 438
FFV
Sbjct: 423 ASFFV 427
>Os04g0653200 Similar to Low affinity calcium transporter CAX2 (Fragment)
Length = 417
Score = 228 bits (580), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 136/378 (35%), Positives = 207/378 (54%), Gaps = 2/378 (0%)
Query: 61 LRRLLGGPAAQLQEVLLGTKLYPLFSAVPLAVAAESLRLGRVWVFAFSLIGLAPLAERVS 120
L+R + ++ V+ +KL L P ++ VF FS++G+ PLAER+
Sbjct: 33 LQRFVESALRSIRIVIFTSKLNLLLPFGPASIILHYTTSRHGLVFLFSMLGITPLAERLG 92
Query: 121 FLSEHIANTVGPTAGGIMNATCGNVPELIIALFALHKNKMEILKWXXXXXXXXXXXXXXX 180
+ +E +A GPT GG++NAT GN E+IIA++AL + +++
Sbjct: 93 YATEQLAIYTGPTVGGLLNATFGNATEMIIAIYALKNGMIRVVQQSLLGSILSNMLLVMG 152
Query: 181 XXXXXXXIVNIGKERPLDKRQADVSIGLLLLGVLCHIATLVSKYTXXXXXXXXXXXVMQL 240
IV+ K++ K A V+ GLLL+ V+ + V +T + L
Sbjct: 153 CAFFAGGIVHRNKDQVFSKATAVVNSGLLLMAVMGLMFPAVLHFTHSEVRQGASE--VSL 210
Query: 241 SRSCAIVMLIAYFGSLMFQLKTHRQIFELXXXXXXXXXXXXXATDKSVIGFASAMVWLIG 300
SR + +ML+AY L FQL + ++S IG ++ WL
Sbjct: 211 SRFSSCIMLVAYASYLYFQLSGRNNAYSPIGSEEMPNEDAAEEDEESEIGMWESIAWLAM 270
Query: 301 MAVVTAMLSSYVVTTIEEASESMGIPVRFISIILLPIVGNAAEHAGAIIFAFKNKIDISL 360
+ + ++LS Y+V IE AS+S+ +PV FIS+ILLPIVGNAAEHA AI+FA K+K+DI+L
Sbjct: 271 LTLWVSILSEYLVNAIEGASDSLNLPVAFISVILLPIVGNAAEHASAIMFAMKDKLDITL 330
Query: 361 GITLGSATQISMLVVPVILIVSWVNAIPMDLDFNLLETGSLAMAVITTAFTLQDDKWHYL 420
G+ +GS+TQISM V+P +++ W+ MDL+F L ET +L + V+ AF LQD +YL
Sbjct: 331 GVAIGSSTQISMFVIPFCVVIGWMMGQKMDLNFQLFETATLFITVLVVAFMLQDGVANYL 390
Query: 421 KGLNLVFSYIVIAVCFFV 438
KGL L+ Y+++A FFV
Sbjct: 391 KGLMLILCYLIVAASFFV 408
>AK072134
Length = 183
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/131 (48%), Positives = 79/131 (60%)
Query: 86 SAVPLAVAAESLRLGRVWVFAFSLIGLAPLAERVSFLSEHIANTVGPTAGGIMNATCGNV 145
AV LA+AA L G+VWVF SLIGL PLAER+SFL+E IA GPT GG++NAT GNV
Sbjct: 28 DAVLLAIAATYLHFGQVWVFVLSLIGLVPLAERLSFLTEQIAFYTGPTVGGLLNATFGNV 87
Query: 146 PELIIALFALHKNKMEILKWXXXXXXXXXXXXXXXXXXXXXXIVNIGKERPLDKRQADVS 205
E+IIAL AL + K+E++K I N+ +P D +QA V+
Sbjct: 88 TEVIIALLALREGKIEVVKCSLLGSILSNLLLVLGTSLFLAGIANLRAHQPYDTKQAHVN 147
Query: 206 IGLLLLGVLCH 216
LL+L VLCH
Sbjct: 148 TALLMLAVLCH 158
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.137 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,432,108
Number of extensions: 335317
Number of successful extensions: 961
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 946
Number of HSP's successfully gapped: 6
Length of query: 450
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 346
Effective length of database: 11,605,545
Effective search space: 4015518570
Effective search space used: 4015518570
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 158 (65.5 bits)