BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0227400 Os02g0227400|AY785765
(602 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0227400 Poly(A) polymerase, central region domain cont... 1231 0.0
Os06g0558700 Similar to Poly(A) polymerase 842 0.0
AK103720 609 e-174
Os06g0319600 Poly(A) polymerase, central region domain cont... 601 e-172
Os04g0588300 528 e-150
Os03g0313200 PAP/25A core domain containing protein 224 1e-58
Os07g0688500 Poly(A) polymerase, central region domain cont... 188 1e-47
Os01g0702900 Similar to Sucrose-phosphate synthase (EC 2.4.... 130 3e-30
Os02g0771500 Similar to Pap1p 103 4e-22
>Os02g0227400 Poly(A) polymerase, central region domain containing protein
Length = 602
Score = 1231 bits (3185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 591/602 (98%), Positives = 591/602 (98%)
Query: 1 GGIFRRGQGEASVVPEADPPLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVL 60
GGIFRRGQGEASVVPEADPPLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVL
Sbjct: 1 GGIFRRGQGEASVVPEADPPLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVL 60
Query: 61 REIDQIVKEWVKKVTIQKGYSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVK 120
REIDQIVKEWVKKVTIQKGYSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVK
Sbjct: 61 REIDQIVKEWVKKVTIQKGYSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVK 120
Query: 121 REEEFFVMLYGALSEMEEVTELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDI 180
REEEFFVMLYGALSEMEEVTELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDI
Sbjct: 121 REEEFFVMLYGALSEMEEVTELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDI 180
Query: 181 SQGSVLCDVDEATVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLL 240
SQGSVLCDVDEATVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLL
Sbjct: 181 SQGSVLCDVDEATVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLL 240
Query: 241 GGVSWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPR 300
GGVSWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPR
Sbjct: 241 GGVSWALLVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPR 300
Query: 301 KNPRDRSHVMPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFE 360
KNPRDRSHVMPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFE
Sbjct: 301 KNPRDRSHVMPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFE 360
Query: 361 PFQFFEAYTRYLXXXXXXXXXXXLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYA 420
PFQFFEAYTRYL LRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYA
Sbjct: 361 PFQFFEAYTRYLVVDIVADDDDDLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYA 420
Query: 421 DPSIQCAHCAFYMGLSRKEGMKIRGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRK 480
DPSIQCAHCAFYMGLSRKEGMKIRGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRK
Sbjct: 421 DPSIQCAHCAFYMGLSRKEGMKIRGQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRK 480
Query: 481 KEIPLYVFEQGCQKTRPPTPICAEQQDQSDKNDSEVCTTTASLVGQLKRKYHSVGGADVD 540
KEIPLYVFEQGCQKTRPPTPICAEQQDQSDKNDSEVCTTTASLVGQLKRKYHSVGGADVD
Sbjct: 481 KEIPLYVFEQGCQKTRPPTPICAEQQDQSDKNDSEVCTTTASLVGQLKRKYHSVGGADVD 540
Query: 541 SFKSVRRASVSPACEEASIQLHDDANFGLTNCSTSPHGSEGSTVSGNSCAAVGTIGLVDE 600
SFKSVRRASVSPACEEASIQLHDDANFGLTNCSTSPHGSEGSTVSGNSCAAVGTIGLVDE
Sbjct: 541 SFKSVRRASVSPACEEASIQLHDDANFGLTNCSTSPHGSEGSTVSGNSCAAVGTIGLVDE 600
Query: 601 TS 602
TS
Sbjct: 601 TS 602
>Os06g0558700 Similar to Poly(A) polymerase
Length = 708
Score = 842 bits (2174), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/569 (71%), Positives = 466/569 (81%), Gaps = 4/569 (0%)
Query: 20 PLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKG 79
P+SLA P DL KTAELEKFLVEAGLYE EESA+REEVL E+D+IVK+WVK++T Q+G
Sbjct: 25 PISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDWVKQLTSQRG 84
Query: 80 YSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVMLYGALSEMEEV 139
Y++QMV+EANAVLFTFGSYRLGVHGPGADID LC+GPSYV REE+FF++L+ L++ EEV
Sbjct: 85 YTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEEV 144
Query: 140 TELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNG 199
TELQPVPDAHVPVMKFKF G+ IDLLYASVSL V+PPD DISQGSVL DVDE TVRSLNG
Sbjct: 145 TELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEVTVRSLNG 204
Query: 200 CRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNA 259
CRVADQILRLVPN E FR TLRCLKYWA++RGVYSNVTG LGGV+WALLVARVCQLYPNA
Sbjct: 205 CRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNA 264
Query: 260 VPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPC 319
VPSMLVSRFFRVFTQWQWPNPVMLCAIE +D LGF VWDPRK RDRSH MPIITPAYPC
Sbjct: 265 VPSMLVSRFFRVFTQWQWPNPVMLCAIE-EDELGFPVWDPRKYHRDRSHHMPIITPAYPC 323
Query: 320 MNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLXXXXXXX 379
MNSSYNVSTSTLRV+MEQFQFGNKICQEI+++KA+WS+LFEPFQFFEAY YL
Sbjct: 324 MNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEAYKNYLQVDIIAE 383
Query: 380 XXXXLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKE 439
LRLWKGW+ESRLRQLTLKIERDT GMLQCHP P EYADPS QCAHCAF+MGLSRKE
Sbjct: 384 DGEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQCAHCAFFMGLSRKE 443
Query: 440 GMKIR-GQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTRPP 498
G KI+ GQ+FDIRGTVDEF H+IGMY W+ GM+LAV+HVR+K+IP YVF +G ++ RP
Sbjct: 444 GAKIQEGQQFDIRGTVDEFRHDIGMYGYWRPGMELAVSHVRRKQIPSYVFPEGYKRPRPS 503
Query: 499 TPICAEQQDQSDKNDSEVCTTTASLVGQLKRKYHSVGGADVDSFKSVRRASVSPACEEAS 558
I Q QS+KND E T S GQ KRK+ + G D + +SV+RAS+SP+
Sbjct: 504 RHINHPQ--QSNKNDVEDGTANRSPDGQPKRKHDTAGVYDSEPGRSVKRASISPSISPVH 561
Query: 559 IQLHDDANFGLTNCSTSPHGSEGSTVSGN 587
+ + + + S + GS S +GN
Sbjct: 562 QKTSSPPSGNIADASGASGGSPVSLANGN 590
>AK103720
Length = 898
Score = 609 bits (1571), Expect = e-174, Method: Compositional matrix adjust.
Identities = 287/348 (82%), Positives = 317/348 (91%), Gaps = 1/348 (0%)
Query: 20 PLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKG 79
P+SLA P DL KTAELEKFLVEAGLYE EESA+REEVL E+D+IVK+WVK++T Q+G
Sbjct: 25 PISLAEPAEVDLQKTAELEKFLVEAGLYESPEESARREEVLGELDKIVKDWVKQLTSQRG 84
Query: 80 YSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVMLYGALSEMEEV 139
Y++QMV+EANAVLFTFGSYRLGVHGPGADID LC+GPSYV REE+FF++L+ L++ EEV
Sbjct: 85 YTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIVLHDILAQTEEV 144
Query: 140 TELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNG 199
TELQPVPDAHVPVMKFKF G+ IDLLYASVSL V+PPD DISQGSVL DVDE TVRSLNG
Sbjct: 145 TELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPPDLDISQGSVLYDVDEVTVRSLNG 204
Query: 200 CRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNA 259
CRVADQILRLVPN E FR TLRCLKYWA++RGVYSNVTG LGGV+WALLVARVCQLYPNA
Sbjct: 205 CRVADQILRLVPNVENFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPNA 264
Query: 260 VPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPC 319
VPSMLVSRFFRVFTQWQWPNPVMLCAIE +D LGF VWDPRK RDRSH MPIITPAYPC
Sbjct: 265 VPSMLVSRFFRVFTQWQWPNPVMLCAIE-EDELGFPVWDPRKYHRDRSHHMPIITPAYPC 323
Query: 320 MNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEA 367
MNSSYNVSTSTLRV+MEQFQFGNKICQEI+++KA+WS+LFEPFQFFE
Sbjct: 324 MNSSYNVSTSTLRVMMEQFQFGNKICQEIDISKANWSALFEPFQFFEG 371
>Os06g0319600 Poly(A) polymerase, central region domain containing protein
Length = 769
Score = 601 bits (1549), Expect = e-172, Method: Compositional matrix adjust.
Identities = 283/496 (57%), Positives = 362/496 (72%), Gaps = 3/496 (0%)
Query: 20 PLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKG 79
P+SL+ PT D+ +T E+EK L +AGLYE +EE+ REEVL ++DQIVK W+KK T G
Sbjct: 37 PISLSGPTEKDVVRTQEVEKCLADAGLYESQEEAVSREEVLGKLDQIVKAWIKKATRASG 96
Query: 80 YSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVMLYGALSEMEEV 139
+ +Q V+EANA +FTFGSYRLGVHGPGADID LC+GP + R E FF LY L +M EV
Sbjct: 97 FGDQFVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRTEYFFQALYDMLVDMPEV 156
Query: 140 TELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNG 199
TEL PVPDAHVPV+KFK G+ IDLLYA+++ VIP D D+S S+L +VDE TVRSLNG
Sbjct: 157 TELHPVPDAHVPVLKFKLNGVSIDLLYANLTHVVIPEDLDLSHDSILHNVDEQTVRSLNG 216
Query: 200 CRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNA 259
CRV D+ILRLVPN FR TLR +++WA+RRGVYSNV G LGG++WALLVAR+CQLYPNA
Sbjct: 217 CRVTDKILRLVPNILTFRTTLRFMRFWAKRRGVYSNVIGFLGGINWALLVARICQLYPNA 276
Query: 260 VPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPC 319
PSML+SRFF+V+++W+WPNPVMLC IE + +LG VWDPR+N RDR H MPIITPAYP
Sbjct: 277 SPSMLISRFFKVYSKWKWPNPVMLCHIE-EGSLGLLVWDPRRNFRDRGHHMPIITPAYPS 335
Query: 320 MNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLXXXXXXX 379
MNSSYNVS ST V++++F + ICQ I+ KA W +LFEP+ FFE+Y YL
Sbjct: 336 MNSSYNVSISTRHVMVQEFTRASDICQAIDERKADWDALFEPYPFFESYRNYLKIEITAR 395
Query: 380 XXXXLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCAHCAFYMGLSRKE 439
LR WKGW+ESRLR L LKIER T+ ML HPNP ++ D S + HC ++MGL +K+
Sbjct: 396 NEDDLRNWKGWVESRLRTLVLKIERFTREMLLSHPNPRDFIDSS-RPLHCFYFMGLWKKQ 454
Query: 440 GMKIR-GQKFDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIPLYVFEQGCQKTRPP 498
+ + +++DIR V+EF I Y W+ GM++ V+HV++K+IP +VF G + +RP
Sbjct: 455 ISQAQEAEQYDIRAIVNEFKSNIHAYQHWREGMEIEVSHVKRKDIPSFVFPGGIRPSRPS 514
Query: 499 TPICAEQQDQSDKNDS 514
+ E + S N S
Sbjct: 515 RTVGKEARAVSRSNIS 530
>Os04g0588300
Length = 556
Score = 528 bits (1360), Expect = e-150, Method: Compositional matrix adjust.
Identities = 269/486 (55%), Positives = 333/486 (68%), Gaps = 15/486 (3%)
Query: 20 PLSLAMPTVADLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKG 79
P+SL PT ADL TA LE+ L E GLYE EE+A REEVLR + +V WVK++T Q+G
Sbjct: 14 PISLVGPTPADLESTARLERLLREEGLYESAEETAAREEVLRGLRGVVDRWVKRLTRQRG 73
Query: 80 YSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVMLYGALSEMEEV 139
Y + M A A++ FGSYRLGVHG G+DIDAL +GPSYV + +FF L AL+E V
Sbjct: 74 YPDGMADRATALVLPFGSYRLGVHGRGSDIDALVVGPSYVDCDRDFFGALATALAETAAV 133
Query: 140 TELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNG 199
ELQPVP AHVPV+K +F G+ +DL+YA V LPV+P D D+S SVL +D AT RSLNG
Sbjct: 134 AELQPVPGAHVPVIKMRFHGVQVDLVYAGVCLPVVPGDLDLSGRSVLRGLDLATARSLNG 193
Query: 200 CRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNA 259
RVAD+ILRLVP+A FR TLRC+K+WA+ RGVYSNV G LGGV WA+LVA VC LYPNA
Sbjct: 194 VRVADEILRLVPDATAFRTTLRCVKHWAKARGVYSNVAGFLGGVGWAILVACVCLLYPNA 253
Query: 260 VPSMLVSRFFRVFTQWQWPNPVMLCAIENDD---NLGFAVWDPRKNPRDRSHVMPIITPA 316
PSML+ RFFRVF +W+WP+PVML AIE+DD L VWDPR+NPRD+ H+MPI+TPA
Sbjct: 254 SPSMLLPRFFRVFARWKWPSPVMLRAIEHDDGELGLSLPVWDPRRNPRDKIHLMPIVTPA 313
Query: 317 YPCMNSSYNVSTSTLRVIMEQFQFGNKICQEI---ELNKASWSSLFEPFQFFEAYTRYLX 373
YPCMNS YNVS +TLRVI EQ G+ +CQEI W LF+PF FF AY YL
Sbjct: 314 YPCMNSGYNVSHATLRVITEQLAVGDAVCQEIVKAGSGGGGWDKLFQPFNFFGAYKSYLQ 373
Query: 374 XXXXXX--XXXXLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYA-----DPSIQC 426
LR WKGW+ESRLR L+ ++E DT GML CH +P YA +P +
Sbjct: 374 VDVTVTGGEEDDLREWKGWVESRLRLLSARVEADTSGMLLCHLHPQPYAAEPHNEPRRRR 433
Query: 427 AHCAFYMGLSRKEGMKIRGQK--FDIRGTVDEFMHEIGMYTQWKSGMDLAVTHVRKKEIP 484
+F++GLS+ + Q FD+R T + F E+ MY W+ GM++AV HVR+K++P
Sbjct: 434 RTSSFFVGLSKPPAQPQQQQHQLFDLRATTEGFKEEVYMYDYWRPGMEVAVAHVRRKDLP 493
Query: 485 LYVFEQ 490
YV Q
Sbjct: 494 SYVLRQ 499
>Os03g0313200 PAP/25A core domain containing protein
Length = 431
Score = 224 bits (572), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/376 (34%), Positives = 193/376 (51%), Gaps = 22/376 (5%)
Query: 70 WVKKVTIQKGYSEQMVKEANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVML 129
W K+V + + A + TFGSY LG +GP +DIDA+C+GP + FF++L
Sbjct: 3 WAKRVAYDQ---REQYWNTTATVLTFGSYALGAYGPESDIDAVCVGPCIASLQHHFFIVL 59
Query: 130 YGALSEMEEVTELQPVPDAHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDIS--QGSVLC 187
L E EV++L + +A VP+M+FKF G+ +D Y V LPVI I +L
Sbjct: 60 RQMLEERPEVSDLHSIENAKVPLMRFKFNGMLVDFPY--VQLPVINAAEAIHAFDPRLLA 117
Query: 188 DVDEATVRSLNGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWAL 247
V+E + R L+G RV QI++L+PN + F+ LRCLK WA++RG++ ++ G G+ A+
Sbjct: 118 AVNEPSWRCLSGVRVNRQIMQLLPNIKKFQILLRCLKLWARKRGLHCHLLGFFAGIHLAI 177
Query: 248 LVARVCQLYPNAVPSMLVSRFFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRS 307
L A VC ++P+A S L + FF +F+ W WP PV L W P
Sbjct: 178 LAAFVCIMHPHATLSSLFNSFFDIFSHWHWPLPVSLLDQPTP-------WRPHC-----C 225
Query: 308 HVMPIITPAYPCMNSSYNVSTSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEA 367
MPI+ P P + +++ ST I E+ Q G + + +W+ LF PF +
Sbjct: 226 SFMPIVMPCSPPEFCASSITRSTFNKIKEELQRGFALTKGDRNGDINWTELFAPFPYTVR 285
Query: 368 YTRYLXXXXXXXXXXXLRLWKGWIESRLRQLTLKIERDTKGMLQCHPNPCEYADPSIQCA 427
Y +L LR W GW++SR R L LK+E + C P+P E AD S+
Sbjct: 286 YKHFLRIVLSAPVAEELRDWVGWVKSRFRNLLLKLESIG---VDCDPDPSEQADHSMIEP 342
Query: 428 HCAFYMGLSRKEGMKI 443
+ F+ GL + I
Sbjct: 343 NVVFFWGLMYRTSTNI 358
>Os07g0688500 Poly(A) polymerase, central region domain containing protein
Length = 447
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 133/439 (30%), Positives = 196/439 (44%), Gaps = 83/439 (18%)
Query: 30 DLHKTAELEKFLVEAGLYEGEEESAKREEVLREIDQIVKEWVKKVTIQKGYSEQMV--KE 87
D +T L +FL + G E KRE+V+R++++IV +W K V EQ V +
Sbjct: 60 DSRRTTSLLQFLKDEGGIPSPEADKKREQVIRKLNKIVMDWAKVVAY-----EQRVPPRR 114
Query: 88 ANAVLFTFGSYRLGVHGPGADIDALCIGPSYVKREEEFFVMLYGALSEMEEVTELQPVPD 147
A A + T+GSY LG HGP +DIDALC+GP + FF++L L + EV+ELQ V
Sbjct: 115 ATATVLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFIVLRQILEDRPEVSELQTVES 174
Query: 148 AHVPVMKFKFRGLPIDLLYASVSLPVIPPDFDISQGSVLCDVDEATVRSLNGCRVADQIL 207
A + S +L +D + RSL+G RV +QI+
Sbjct: 175 AKAIIT---------------------------SNPHLLQKLDSLSWRSLSGVRVNEQIV 207
Query: 208 RLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNAVPSMLVSR 267
+LVPNA+ F+ LRC+K WA+RRG++ ++ G G+ A+L A VCQ YP ++ +
Sbjct: 208 QLVPNAQKFQILLRCIKLWAKRRGIHCHLLGFFAGIHLAILAAYVCQRYPYGTINVSLHG 267
Query: 268 FFRVFTQWQWPNPVMLCAIENDDNLGFAVWDPRKNPRDRSHVMPIITPAYPCMNSSYNVS 327
P R MPI+ P P + N++
Sbjct: 268 ------------------------------QPTNCRRPDGSFMPILLPCTPPEFCTSNMT 297
Query: 328 TSTLRVIMEQFQFGNKICQEIELNKASWSSLFEPFQFFEAYTRYLXXXXXXXXXXXLRLW 387
T + I E+ G + +E + W LF PF + Y +L LR W
Sbjct: 298 KGTFKKIREELMRGYALTKEPWRHDFEWVWLFAPFPYATKYEEFLRIALCAPTSEELRDW 357
Query: 388 KGWIESRLRQLTLKIERDTKGMLQCHPNPCEYAD-----PSIQCAHCAFYMGLSRKEGMK 442
GW++SR L LK+E ++C P+ E D PSI C + GL K
Sbjct: 358 AGWVKSRF-NLILKLESIG---VECDPDSTEEVDHTVFEPSIVC-----HWGLIYKTSTH 408
Query: 443 IRGQKFDIRGTVDEFMHEI 461
I DI ++FM ++
Sbjct: 409 I-----DISSLGEDFMKDV 422
>Os01g0702900 Similar to Sucrose-phosphate synthase (EC 2.4.1.14)
Length = 129
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 65/111 (58%), Positives = 81/111 (72%), Gaps = 3/111 (2%)
Query: 155 FKFRGLPIDLLYASVSLPVIPPDFDISQG--SVLCDVDE-ATVRSLNGCRVADQILRLVP 211
+FRG+ +DL+YA V LP P + Q SVL +D+ AT RSLNG RVAD+ILRLVP
Sbjct: 1 MRFRGVQVDLVYAGVCLPWCPTTWSGPQCDRSVLRGLDDLATARSLNGIRVADEILRLVP 60
Query: 212 NAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYPNAVPS 262
+FR LRC+K+WA+ RGVYSNV G LGG+ WA+LVAR+CQLYPN P+
Sbjct: 61 ETAVFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPNTSPA 111
>Os02g0771500 Similar to Pap1p
Length = 91
Score = 103 bits (257), Expect = 4e-22, Method: Composition-based stats.
Identities = 44/65 (67%), Positives = 53/65 (81%)
Query: 198 NGCRVADQILRLVPNAEIFRKTLRCLKYWAQRRGVYSNVTGLLGGVSWALLVARVCQLYP 257
+G RVAD+ILRLVP+ FR LRC+K+WA+ RGVYSNV G LGG+ WA+LVARVCQLYP
Sbjct: 9 HGIRVADEILRLVPDTAAFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARVCQLYP 68
Query: 258 NAVPS 262
N P+
Sbjct: 69 NTSPA 73
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.320 0.135 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 21,388,433
Number of extensions: 895105
Number of successful extensions: 2150
Number of sequences better than 1.0e-10: 9
Number of HSP's gapped: 2134
Number of HSP's successfully gapped: 10
Length of query: 602
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 495
Effective length of database: 11,448,903
Effective search space: 5667206985
Effective search space used: 5667206985
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 159 (65.9 bits)