Os01g0702900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Sucrose-phosphate synthase (EC 2.4.1.14).
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Os01g0702900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Sucrose-phosphate synthase (EC 2.4.1.14).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 83.96 | 0.431 | 10.8 | -0.0502 | 0.453 | 1.16 | -0.374 | 0.0244 | 0.11 | 3.16 | 14.23 | 10 | -- | -- |
| 83.6 | 0.429 | 10.8 | -0.043 | 0.511 | 1.13 | -0.337 | -- | 0.0998 | 3.07 | 14.23 | 10 | -- | -- |
| 83.91 | 0.43 | 10.8 | -0.0387 | 0.507 | 1.13 | -- | -0.107 | 0.102 | 3.12 | 14.23 | 10 | -- | -- |
| 83.85 | 0.426 | 10.8 | -0.0487 | 0.452 | 1.18 | -- | -- | 0.0989 | 3.47 | 12.77 | 6 | -- | -- |
| 91.23 | 0.445 | 10.8 | -0.0373 | -- | 1.38 | -- | -0.157 | 0.127 | -- | 13.49 | 10 | -- | -- |
| 106.39 | 0.484 | 10.9 | -0.0688 | 1.59 | -- | -0.181 | -- | 0.0802 | 0.717 | -- | -- | -- | -- |
| 106.53 | 0.483 | 10.9 | -0.062 | 1.59 | -- | -- | -- | 0.0812 | 0.714 | -- | -- | -- | -- |
| 91.37 | 0.445 | 10.8 | -0.0332 | -- | 1.38 | -- | -- | 0.127 | -- | 13.44 | 10 | -- | -- |
| 83.91 | 0.427 | 10.8 | -- | 0.452 | 1.17 | -- | -- | 0.105 | 3.47 | 12.83 | 6 | -- | -- |
| 265.08 | 0.761 | 10.8 | -0.00484 | -- | -- | -- | -- | 0.11 | -- | -- | -- | -- | -- |
| 106.63 | 0.483 | 10.9 | -- | 1.59 | -- | -- | -- | 0.0881 | 0.712 | -- | -- | -- | -- |
| 91.4 | 0.445 | 10.8 | -- | -- | 1.38 | -- | -- | 0.131 | -- | 13.5 | 10 | -- | -- |
| 265.08 | 0.76 | 10.8 | -- | -- | -- | -- | -- | 0.11 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 78.68 | radiation | 10 | 10 | < th | dose dependent | sin | 2 | NA |
| 9 | 82.85 | wind | 1 | 90 | > th | dose independent | rect. | 1 | 19 |
| 10 | 82.87 | radiation | 10 | 10 | < th | dose dependent | rect. | 3 | 17 |
| 14 | 83.19 | radiation | 20 | 10 | < th | dose dependent | rect. | 13 | 20 |
| 16 | 83.27 | radiation | 10 | 10 | < th | dose dependent | rect. | 3 | 13 |
| 26 | 83.72 | radiation | 10 | 10 | < th | dose dependent | rect. | 1 | 19 |
| 36 | 84.24 | wind | 1 | 90 | > th | dose independent | rect. | 1 | 6 |
| 47 | 84.78 | radiation | 10 | 90 | < th | dose dependent | rect. | 1 | 16 |
| 48 | 84.78 | radiation | 20 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 51 | 84.87 | radiation | 10 | 43200 | < th | dose dependent | rect. | 21 | 6 |
| 52 | 84.88 | radiation | 20 | 10 | < th | dose dependent | rect. | 10 | 23 |
| 56 | 84.90 | radiation | 20 | 10 | < th | dose dependent | rect. | 23 | 23 |
| 64 | 85.14 | radiation | 20 | 10 | < th | dose dependent | rect. | 21 | 23 |
| 66 | 85.17 | radiation | 20 | 10 | < th | dose dependent | no | NA | NA |
| 68 | 85.20 | radiation | 20 | 10 | < th | dose dependent | rect. | 15 | 23 |
| 97 | 85.67 | wind | 1 | 270 | > th | dose independent | rect. | 23 | 20 |
| 102 | 85.72 | radiation | 10 | 10 | < th | dose dependent | rect. | 3 | 8 |
| 108 | 85.76 | radiation | 1 | 30 | < th | dose independent | sin | 1 | NA |
| 112 | 85.81 | radiation | 1 | 90 | > th | dose independent | sin | 2 | NA |
| 211 | 86.87 | radiation | 20 | 90 | < th | dose dependent | rect. | 1 | 9 |
| 238 | 87.12 | radiation | 10 | 10 | < th | dose independent | rect. | 1 | 19 |
| 257 | 87.32 | wind | 1 | 270 | > th | dose independent | rect. | 23 | 7 |
| 266 | 87.41 | radiation | 10 | 10 | < th | dose independent | rect. | 3 | 17 |
| 286 | 87.57 | radiation | 1 | 90 | < th | dose independent | rect. | 1 | 18 |
| 345 | 88.03 | radiation | 1 | 270 | < th | dose independent | rect. | 23 | 19 |
| 439 | 88.61 | radiation | 10 | 10 | < th | dose dependent | rect. | 17 | 23 |
| 443 | 88.64 | temperature | 30 | 90 | < th | dose dependent | rect. | 1 | 6 |
| 445 | 88.65 | radiation | 10 | 90 | < th | dose independent | rect. | 1 | 14 |
| 461 | 88.74 | temperature | 10 | 270 | > th | dose dependent | rect. | 18 | 6 |
| 473 | 88.79 | temperature | 10 | 10 | > th | dose dependent | rect. | 20 | 7 |
| 506 | 88.97 | humidity | 80 | 10 | > th | dose independent | rect. | 3 | 17 |
| 508 | 88.98 | radiation | 10 | 90 | < th | dose independent | rect. | 1 | 9 |
| 517 | 89.00 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 4 |
| 552 | 89.14 | humidity | 50 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 577 | 89.25 | radiation | 10 | 10 | < th | dose dependent | rect. | 7 | 23 |
| 615 | 89.42 | radiation | 10 | 270 | < th | dose dependent | rect. | 23 | 15 |
| 632 | 89.46 | temperature | 30 | 270 | < th | dose dependent | rect. | 1 | 3 |
| 646 | 89.50 | radiation | 10 | 10 | < th | dose dependent | rect. | 3 | 23 |
| 717 | 89.75 | radiation | 10 | 10 | < th | dose independent | rect. | 1 | 15 |
| 732 | 89.79 | wind | 1 | 90 | > th | dose independent | rect. | 13 | 17 |
| 800 | 90.05 | radiation | 10 | 10 | < th | dose independent | rect. | 1 | 9 |
| 805 | 90.06 | radiation | 10 | 270 | < th | dose dependent | rect. | 23 | 9 |
| 840 | 90.20 | radiation | 1 | 90 | > th | dose independent | rect. | 5 | 10 |
| 888 | 90.34 | temperature | 30 | 10 | < th | dose dependent | rect. | 2 | 5 |
| 893 | 90.36 | temperature | 15 | 10 | > th | dose independent | rect. | 20 | 7 |
| 897 | 90.37 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 24 | 5 |
| 929 | 90.47 | humidity | 80 | 10 | > th | dose independent | rect. | 3 | 15 |
| 931 | 90.48 | humidity | 80 | 10 | > th | dose independent | rect. | 3 | 13 |
| 954 | 90.53 | atmosphere | 995 | 270 | > th | dose dependent | rect. | 1 | 3 |