BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os01g0702900 Os01g0702900|AK071158
         (129 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G25850.2  | chr2:11026123-11030440 REVERSE LENGTH=801          127   2e-30
AT4G32850.8  | chr4:15850134-15854443 FORWARD LENGTH=766          125   7e-30
AT1G17980.1  | chr1:6187742-6191418 REVERSE LENGTH=714            122   5e-29
AT3G06560.1  | chr3:2044443-2047034 FORWARD LENGTH=508             79   6e-16

>AT2G25850.2 | chr2:11026123-11030440 REVERSE LENGTH=801
          Length = 800

 Score =  127 bits (318), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 60/106 (56%), Positives = 77/106 (72%), Gaps = 3/106 (2%)

Query: 2   RFRGVQVDLVYAGVCLPWCPTTWSGPQCDRSVLRGLDDLATARSLNGIRVADEILRLVPE 61
           +F+G+ +DL+YA + L   P        + SVL  +D+  T RSLNG RVAD+IL+LVP 
Sbjct: 164 KFQGISIDLLYASISLLVIPQDLD--ISNSSVLCDVDE-QTVRSLNGCRVADQILKLVPN 220

Query: 62  TAVFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPN 107
           +  FRT LRC+K+WAK RGVYSNV GFLGG+ WA+LVAR+CQ YPN
Sbjct: 221 SEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARLCQFYPN 266



>AT4G32850.8 | chr4:15850134-15854443 FORWARD LENGTH=766
          Length = 765

 Score =  125 bits (313), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 61/106 (57%), Positives = 76/106 (71%), Gaps = 3/106 (2%)

Query: 2   RFRGVQVDLVYAGVCLPWCPTTWSGPQCDRSVLRGLDDLATARSLNGIRVADEILRLVPE 61
           +F+G+ +DL+YA + L   P          SVL  +D+  T RSLNG RVAD+IL+LVP 
Sbjct: 162 KFQGIPIDLLYASISLLVVPQDLD--ISSSSVLCEVDE-PTVRSLNGCRVADQILKLVPN 218

Query: 62  TAVFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPN 107
              FRT LRC+K+WAK RGVYSNV GFLGG+ WA+LVAR+CQLYPN
Sbjct: 219 FEHFRTTLRCLKYWAKKRGVYSNVTGFLGGVNWALLVARVCQLYPN 264



>AT1G17980.1 | chr1:6187742-6191418 REVERSE LENGTH=714
          Length = 713

 Score =  122 bits (306), Expect = 5e-29,   Method: Composition-based stats.
 Identities = 61/106 (57%), Positives = 74/106 (69%), Gaps = 3/106 (2%)

Query: 2   RFRGVQVDLVYAGVCLPWCPTTWSGPQCDRSVLRGLDDLATARSLNGIRVADEILRLVPE 61
           +  GV +DL+YA + L   P      Q   S+L+  D+  T RSLNG RV D+ILRLVP 
Sbjct: 152 KLNGVSIDLLYAQLPLWVIPEDLDLSQ--DSILQNADE-QTVRSLNGCRVTDQILRLVPN 208

Query: 62  TAVFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPN 107
              FRT LRC++ WAK RGVYSNV+GFLGGI WA+LVAR+CQLYPN
Sbjct: 209 IQNFRTTLRCMRFWAKRRGVYSNVSGFLGGINWALLVARICQLYPN 254



>AT3G06560.1 | chr3:2044443-2047034 FORWARD LENGTH=508
          Length = 507

 Score = 79.0 bits (193), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 45/106 (42%), Positives = 64/106 (60%), Gaps = 3/106 (2%)

Query: 2   RFRGVQVDLVYAGVCLPWCPTTWSGPQCDRSVLRGLDDLATARSLNGIRVADEILRLVPE 61
           +F G+ VDL YA + +   P        +   LR +D+  + + L+G+R    IL+LVP 
Sbjct: 140 KFDGILVDLPYAQLRVLSIPNNVD--VLNPFFLRDIDE-TSWKILSGVRANKCILQLVPS 196

Query: 62  TAVFRTMLRCVKHWAKARGVYSNVAGFLGGIGWAILVARMCQLYPN 107
             +F+++LRCVK WAK RGVY N+ GFLGG+  AIL A +C   PN
Sbjct: 197 LELFQSLLRCVKLWAKRRGVYGNLNGFLGGVHMAILAAFVCGYQPN 242



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.328    0.141    0.478 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,252,819
Number of extensions: 73885
Number of successful extensions: 225
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 223
Number of HSP's successfully gapped: 4
Length of query: 129
Length of database: 11,106,569
Length adjustment: 87
Effective length of query: 42
Effective length of database: 8,721,377
Effective search space: 366297834
Effective search space used: 366297834
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 106 (45.4 bits)