BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0171100 Os02g0171100|AK070032
(411 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0171100 Similar to Glyceraldehyde-3-phosphate dehydrog... 760 0.0
Os06g0666600 Similar to Glyceraldehyde-3-phosphate dehydrog... 676 0.0
Os08g0126300 Similar to Glyceraldehyde-3-phosphate dehydrog... 484 e-137
AK100159 484 e-137
AK108431 484 e-137
AK108644 483 e-137
Os02g0601300 Similar to Glyceraldehyde-3-phosphate dehydrog... 482 e-136
Os04g0486600 Similar to Glyceraldehyde-3-phosphate dehydrog... 481 e-136
AK109097 464 e-131
Os03g0129300 Similar to Glyceraldehyde-3-phosphate dehydrog... 293 2e-79
AK109016 283 2e-76
Os04g0459500 Similar to GADPH (383 AA) (Fragment) 266 2e-71
D21280 106 3e-23
>Os02g0171100 Similar to Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
(GAPDH)
Length = 411
Score = 760 bits (1962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/411 (91%), Positives = 377/411 (91%)
Query: 1 MAQQLSXXXXXXXXXXXXXXXXXXXXXKVLRLRSAGSAQFTSIAASSSFARNIEPLRAIA 60
MAQQLS KVLRLRSAGSAQFTSIAASSSFARNIEPLRAIA
Sbjct: 1 MAQQLSAPFRAAAAAGSRASAAAADPAKVLRLRSAGSAQFTSIAASSSFARNIEPLRAIA 60
Query: 61 TQAPPAVPQYSSGEKTKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMFK 120
TQAPPAVPQYSSGEKTKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMFK
Sbjct: 61 TQAPPAVPQYSSGEKTKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMFK 120
Query: 121 YDSTHGPFKGSIKVVDDSTLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEK 180
YDSTHGPFKGSIKVVDDSTLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEK
Sbjct: 121 YDSTHGPFKGSIKVVDDSTLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEK 180
Query: 181 ASAHLKGGAKKVVISAPSADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAKVVHEE 240
ASAHLKGGAKKVVISAPSADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAKVVHEE
Sbjct: 181 ASAHLKGGAKKVVISAPSADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAKVVHEE 240
Query: 241 FGIVEGLMXXXXXXXXXXXXXDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGK 300
FGIVEGLM DGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGK
Sbjct: 241 FGIVEGLMTTVHATTATQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGK 300
Query: 301 LTGMAFRVPTPNVSVVDLTCRIEKSASYDDVKAAIKAASEGALKGILGYTDEDVVSNDFV 360
LTGMAFRVPTPNVSVVDLTCRIEKSASYDDVKAAIKAASEGALKGILGYTDEDVVSNDFV
Sbjct: 301 LTGMAFRVPTPNVSVVDLTCRIEKSASYDDVKAAIKAASEGALKGILGYTDEDVVSNDFV 360
Query: 361 GDARSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDLIAHMALVNAKH 411
GDARSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDLIAHMALVNAKH
Sbjct: 361 GDARSSIFDAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDLIAHMALVNAKH 411
>Os06g0666600 Similar to Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3
(EC 1.2.1.12)
Length = 415
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/383 (85%), Positives = 348/383 (90%)
Query: 28 KVLRLRSAGSAQFTSIAASSSFARNIEPLRAIATQAPPAVPQYSSGEKTKVGINGFGRIG 87
KV +RS + F S+ ASSS A ++EP+RA ATQAP A Q SS EKTKVGINGFGRIG
Sbjct: 32 KVSCVRSKVTCGFPSVGASSSLASSVEPVRATATQAPLATHQSSSTEKTKVGINGFGRIG 91
Query: 88 RLVLRIATSRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGSIKVVDDSTLEINGKKV 147
RLVLRIAT+RDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKG+IKVVD+STLEINGKK+
Sbjct: 92 RLVLRIATNRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGTIKVVDESTLEINGKKI 151
Query: 148 TITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKVVISAPSADAPMFVVG 207
++TSKRDP+DIPWGNFGAEYVVESSGVFTTTEKASAHLKGGA+KVVISAPSADAPMFVVG
Sbjct: 152 SVTSKRDPSDIPWGNFGAEYVVESSGVFTTTEKASAHLKGGARKVVISAPSADAPMFVVG 211
Query: 208 VNEKSYDPKMNVVSNASCTTNCLAPLAKVVHEEFGIVEGLMXXXXXXXXXXXXXDGPSMK 267
VNEK+Y+P MNVVSNASCTTNCLAPLAK+VHEEFGI EGLM DGPSMK
Sbjct: 212 VNEKNYNPSMNVVSNASCTTNCLAPLAKIVHEEFGIAEGLMTTVHATTATQKTVDGPSMK 271
Query: 268 DWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRIEKSAS 327
DWRGGRGA+QNIIPSSTGAAKAVGKVLP LNGKLTGMAFRVPTPNVSVVDLTCR+EKSAS
Sbjct: 272 DWRGGRGASQNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTPNVSVVDLTCRLEKSAS 331
Query: 328 YDDVKAAIKAASEGALKGILGYTDEDVVSNDFVGDARSSIFDAKAGIGLSSSFMKLVSWY 387
Y+DVKAAIK ASEG+LKGILGYTDEDVVSNDF+GD RSSIFDAKAGIGLSSSFMKLVSWY
Sbjct: 332 YEDVKAAIKEASEGSLKGILGYTDEDVVSNDFIGDTRSSIFDAKAGIGLSSSFMKLVSWY 391
Query: 388 DNEWGYSNRVLDLIAHMALVNAK 410
DNEWGYSNRVLDLI HMALVNAK
Sbjct: 392 DNEWGYSNRVLDLIGHMALVNAK 414
>Os08g0126300 Similar to Glyceraldehyde-3-phosphate dehydrogenase (Fragment)
Length = 337
Score = 484 bits (1246), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 270/332 (81%), Gaps = 1/332 (0%)
Query: 75 KTKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGS-IK 133
K K+GINGFGRIGRLV R+A +D+E+VAVNDPFI YM YMFKYD+ HG +K S IK
Sbjct: 3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIK 62
Query: 134 VVDDSTLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKVV 193
+ D TL + K VT+ R+P +IPW GAEYVVES+GVFT EKA+AHLKGGAKKVV
Sbjct: 63 IKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVV 122
Query: 194 ISAPSADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAKVVHEEFGIVEGLMXXXXX 253
ISAPS DAPMFV GVNE Y +++VSNASCTTNCLAPLAKV+H+ FGI+EGLM
Sbjct: 123 ISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTVHA 182
Query: 254 XXXXXXXXDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNV 313
DGPS KDWRGGR A+ NIIPSSTGAAKAVGKVLP+LNGKLTGM+FRVPT +V
Sbjct: 183 ITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDV 242
Query: 314 SVVDLTCRIEKSASYDDVKAAIKAASEGALKGILGYTDEDVVSNDFVGDARSSIFDAKAG 373
SVVDLT RIEK+ASYD +K+AIK+ASEG LKGI+GY +ED+VS DFVGD+RSSIFDAKAG
Sbjct: 243 SVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAG 302
Query: 374 IGLSSSFMKLVSWYDNEWGYSNRVLDLIAHMA 405
I L+ +F+KLV+WYDNEWGYSNRV+DLI HMA
Sbjct: 303 IALNDNFVKLVAWYDNEWGYSNRVIDLIRHMA 334
>AK100159
Length = 337
Score = 484 bits (1246), Expect = e-137, Method: Compositional matrix adjust.
Identities = 233/332 (70%), Positives = 270/332 (81%), Gaps = 1/332 (0%)
Query: 75 KTKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGS-IK 133
K K+GINGFGRIGRLV R+A +D+E+VAVNDPFI YM YMFKYD+ HG +K S IK
Sbjct: 3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHSDIK 62
Query: 134 VVDDSTLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKVV 193
+ D TL + K VT+ R+P +IPW GAEYVVES+GVFT EKA+AHLKGGAKKVV
Sbjct: 63 IKDSKTLLLGEKPVTVFGIRNPDEIPWAEAGAEYVVESTGVFTDKEKAAAHLKGGAKKVV 122
Query: 194 ISAPSADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAKVVHEEFGIVEGLMXXXXX 253
ISAPS DAPMFV GVNE Y +++VSNASCTTNCLAPLAKV+H+ FGI+EGLM
Sbjct: 123 ISAPSKDAPMFVCGVNEDKYTSDIDIVSNASCTTNCLAPLAKVIHDNFGIIEGLMTTVHA 182
Query: 254 XXXXXXXXDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNV 313
DGPS KDWRGGR A+ NIIPSSTGAAKAVGKVLP+LNGKLTGM+FRVPT +V
Sbjct: 183 ITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPDLNGKLTGMSFRVPTVDV 242
Query: 314 SVVDLTCRIEKSASYDDVKAAIKAASEGALKGILGYTDEDVVSNDFVGDARSSIFDAKAG 373
SVVDLT RIEK+ASYD +K+AIK+ASEG LKGI+GY +ED+VS DFVGD+RSSIFDAKAG
Sbjct: 243 SVVDLTVRIEKAASYDAIKSAIKSASEGKLKGIIGYVEEDLVSTDFVGDSRSSIFDAKAG 302
Query: 374 IGLSSSFMKLVSWYDNEWGYSNRVLDLIAHMA 405
I L+ +F+KLV+WYDNEWGYSNRV+DLI HMA
Sbjct: 303 IALNDNFVKLVAWYDNEWGYSNRVIDLIRHMA 334
>AK108431
Length = 337
Score = 484 bits (1246), Expect = e-137, Method: Compositional matrix adjust.
Identities = 230/334 (68%), Positives = 276/334 (82%)
Query: 77 KVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGSIKVVD 136
KVGINGFGRIGR+V R AT ++VVAVNDPFI+ Y AYM +YDSTHG FKG+I++
Sbjct: 4 KVGINGFGRIGRIVFRNATQAGTVDVVAVNDPFIEVHYAAYMLRYDSTHGQFKGTIEING 63
Query: 137 DSTLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKVVISA 196
L +NGKK+ ++RDPA IPWG GA+YVVES+GVFTTT+KASAH+KGGAKKV+ISA
Sbjct: 64 TEGLIVNGKKIRFYAERDPAAIPWGKEGADYVVESTGVFTTTDKASAHIKGGAKKVIISA 123
Query: 197 PSADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAKVVHEEFGIVEGLMXXXXXXXX 256
PSADAPMFV+GVN SY +NV+SNASCTTNCLAPLAKV+++++G+VEGLM
Sbjct: 124 PSADAPMFVMGVNNDSYTKDVNVLSNASCTTNCLAPLAKVINDKYGLVEGLMTTVHSYTA 183
Query: 257 XXXXXDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVV 316
DGPS KDWRGGR AAQNIIPSSTGAAKAVGKV+P LNGKLTGM+ RVPT NVSVV
Sbjct: 184 TQKTVDGPSGKDWRGGRTAAQNIIPSSTGAAKAVGKVIPSLNGKLTGMSMRVPTANVSVV 243
Query: 317 DLTCRIEKSASYDDVKAAIKAASEGALKGILGYTDEDVVSNDFVGDARSSIFDAKAGIGL 376
DLTCRIEK A+Y+++KA IKAASE LKGILGYT++D+VS D GD SSIFDAKAGI L
Sbjct: 244 DLTCRIEKGATYEEIKATIKAASENELKGILGYTEDDIVSTDLNGDDHSSIFDAKAGIAL 303
Query: 377 SSSFMKLVSWYDNEWGYSNRVLDLIAHMALVNAK 410
+++F+KLVSWYDNEWGYS+RV+DLI+++A V+ +
Sbjct: 304 NANFIKLVSWYDNEWGYSHRVVDLISYIAKVDGQ 337
>AK108644
Length = 333
Score = 483 bits (1244), Expect = e-137, Method: Compositional matrix adjust.
Identities = 230/329 (69%), Positives = 267/329 (81%), Gaps = 1/329 (0%)
Query: 77 KVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGSIKVVD 136
KVG+NGFGRIGRLV R A ++VVA+NDPFID YM YMFKYDSTHG FKG++K +
Sbjct: 3 KVGVNGFGRIGRLVTRAAVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFKGTVKA-E 61
Query: 137 DSTLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKVVISA 196
+ L ING +TI +RDP++I W + GAEYVVES+GVFTT EKA AHLKGGAK+V+ISA
Sbjct: 62 NGKLVINGHAITIFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISA 121
Query: 197 PSADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAKVVHEEFGIVEGLMXXXXXXXX 256
PSADAPMFV+GVN + YD + +VSNASCTTNCLAPLAKV+H+ FGIVEGLM
Sbjct: 122 PSADAPMFVMGVNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITA 181
Query: 257 XXXXXDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVV 316
DGPS K WR GRGAAQNIIP+STGAAKAVGKV+PELNGKLTGMAFRVPTPNVSVV
Sbjct: 182 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241
Query: 317 DLTCRIEKSASYDDVKAAIKAASEGALKGILGYTDEDVVSNDFVGDARSSIFDAKAGIGL 376
DLTCR+EK A YDD+K +KAA++G LKGILGYT++ VVS DF GD+ SS FDA AGI L
Sbjct: 242 DLTCRLEKPAKYDDIKRVVKAAADGPLKGILGYTEDQVVSCDFNGDSHSSTFDAGAGIAL 301
Query: 377 SSSFMKLVSWYDNEWGYSNRVLDLIAHMA 405
+ F+KLVSWYDNE+GYSNRV+DL+ HMA
Sbjct: 302 NDHFVKLVSWYDNEFGYSNRVVDLMVHMA 330
>Os02g0601300 Similar to Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3
(EC 1.2.1.12)
Length = 337
Score = 482 bits (1240), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/335 (69%), Positives = 266/335 (79%), Gaps = 1/335 (0%)
Query: 75 KTKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKG-SIK 133
K K+GINGFGRIGRLV R+A +D+E+VAVNDPFI +YM YMFKYD+ HG +K +K
Sbjct: 3 KIKIGINGFGRIGRLVARVALQSEDVELVAVNDPFITTEYMTYMFKYDTVHGQWKHHEVK 62
Query: 134 VVDDSTLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKVV 193
V D TL K+V + R+P +IPW GAEYVVES+GVFT +KA+AHLKGGAKKVV
Sbjct: 63 VKDSKTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTDKDKAAAHLKGGAKKVV 122
Query: 194 ISAPSADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAKVVHEEFGIVEGLMXXXXX 253
ISAPS DAPMFVVGVNEK Y +N+VSNASCTTNCLAPLAKV+++ FGIVEGLM
Sbjct: 123 ISAPSKDAPMFVVGVNEKEYKSDVNIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHA 182
Query: 254 XXXXXXXXDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNV 313
DGPSMKDWRGGR A+ NIIPSSTGAAKAVGKVLP LNGKLTGMAFRVPT +V
Sbjct: 183 ITATQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 242
Query: 314 SVVDLTCRIEKSASYDDVKAAIKAASEGALKGILGYTDEDVVSNDFVGDARSSIFDAKAG 373
SVVDLT R+EK ASYD +KAAIK +EG LKGILGY +ED+VS DF GD+RSSIFDAKAG
Sbjct: 243 SVVDLTVRLEKPASYDQIKAAIKEEAEGKLKGILGYVEEDLVSTDFQGDSRSSIFDAKAG 302
Query: 374 IGLSSSFMKLVSWYDNEWGYSNRVLDLIAHMALVN 408
I LS +F+KLVSWYDNEWGYS RV+DLI HM N
Sbjct: 303 IALSDTFVKLVSWYDNEWGYSTRVIDLIRHMHSTN 337
>Os04g0486600 Similar to Glyceraldehyde-3-phosphate dehydrogenase, cytosolic 3
(EC 1.2.1.12)
Length = 337
Score = 481 bits (1238), Expect = e-136, Method: Compositional matrix adjust.
Identities = 234/331 (70%), Positives = 266/331 (80%), Gaps = 1/331 (0%)
Query: 75 KTKVGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKG-SIK 133
K K+GINGFGRIGRLV R+A DD+E+VAVNDPFI YM YMFKYD+ HG +K +K
Sbjct: 3 KIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHHEVK 62
Query: 134 VVDDSTLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKVV 193
V D TL K+VT+ R+P +IPWG GAE+VVES+GVFT +KA+AHLKGGAKKVV
Sbjct: 63 VKDSKTLLFGEKEVTVFGCRNPEEIPWGETGAEFVVESTGVFTDKDKAAAHLKGGAKKVV 122
Query: 194 ISAPSADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAKVVHEEFGIVEGLMXXXXX 253
ISAPS DAPMFVVGVNEK Y P +++VSNASCTTNCLAPLAKV+++ FGIVEGLM
Sbjct: 123 ISAPSKDAPMFVVGVNEKEYKPDIDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHA 182
Query: 254 XXXXXXXXDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNV 313
DGPS KDWRGGR A+ NIIPSSTGAAKAVGKVLP LNGKLTGMAFRVPT +V
Sbjct: 183 ITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDV 242
Query: 314 SVVDLTCRIEKSASYDDVKAAIKAASEGALKGILGYTDEDVVSNDFVGDARSSIFDAKAG 373
SVVDLT R+EK ASYD +KAAIK SEG LKGILGY +ED+VS DF GD RSSIFDAKAG
Sbjct: 243 SVVDLTVRLEKPASYDQIKAAIKEESEGKLKGILGYVEEDLVSTDFQGDNRSSIFDAKAG 302
Query: 374 IGLSSSFMKLVSWYDNEWGYSNRVLDLIAHM 404
I L+ +F+KLVSWYDNEWGYS+RV+DLI HM
Sbjct: 303 IALNDNFVKLVSWYDNEWGYSSRVVDLIRHM 333
>AK109097
Length = 334
Score = 464 bits (1193), Expect = e-131, Method: Compositional matrix adjust.
Identities = 220/327 (67%), Positives = 267/327 (81%), Gaps = 2/327 (0%)
Query: 78 VGINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGSIKVVDD 137
+GINGFGRIGR+VLR A + + VVA+NDPFI YM YMFKYDSTHG FKG I +
Sbjct: 5 IGINGFGRIGRIVLRAALEKG-VNVVAINDPFIPLDYMVYMFKYDSTHGRFKGDIHHAN- 62
Query: 138 STLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKVVISAP 197
L +NG ++++ +++DP IPWG GAEYVVE++GVFTT +K AH+ GGAKKV+I+AP
Sbjct: 63 GFLYVNGHQISVFTEKDPTQIPWGKSGAEYVVEAAGVFTTIDKCQAHITGGAKKVIITAP 122
Query: 198 SADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAKVVHEEFGIVEGLMXXXXXXXXX 257
SADAPMFV GVNEK+Y+P +N++SNASCTTNCLAPLAKV++++FGIVEGLM
Sbjct: 123 SADAPMFVCGVNEKTYNPSINILSNASCTTNCLAPLAKVINDKFGIVEGLMTTVHSYTAT 182
Query: 258 XXXXDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVD 317
DGPS KDWRGGR AA NIIPSSTGAAKAVGKV+P+LNGKLTGMAFRVPT +VSVVD
Sbjct: 183 QKTVDGPSNKDWRGGRTAATNIIPSSTGAAKAVGKVIPDLNGKLTGMAFRVPTADVSVVD 242
Query: 318 LTCRIEKSASYDDVKAAIKAASEGALKGILGYTDEDVVSNDFVGDARSSIFDAKAGIGLS 377
LT R+ K A YD++KAA+KAASEG LKGIL YT+++VVS+DF+GD SSIFDAKAGI L+
Sbjct: 243 LTVRLAKPAKYDEIKAAVKAASEGELKGILAYTEDEVVSSDFIGDHHSSIFDAKAGISLN 302
Query: 378 SSFMKLVSWYDNEWGYSNRVLDLIAHM 404
+F+KLVSWYDNE+GYS RV+DLI H+
Sbjct: 303 DNFVKLVSWYDNEFGYSCRVIDLIKHV 329
>Os03g0129300 Similar to Glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13)
(Fragment)
Length = 444
Score = 293 bits (749), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 165/336 (49%), Positives = 214/336 (63%), Gaps = 9/336 (2%)
Query: 75 KTKVGINGFGRIGRLVLRIATSRDD--IEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGSI 132
K KV INGFGRIGR LR R++ +EVV VND + +++ KYDS G FK +
Sbjct: 77 KLKVAINGFGRIGRNFLRCWHERENSPLEVVVVNDSG-GVRNASHLLKYDSMLGTFKADV 135
Query: 133 KVVDDSTLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKV 192
K+VDD T+ ++GK + + S RDP +PW G + V+E +GVF A H++ GAKKV
Sbjct: 136 KIVDDQTISVDGKLIKVVSNRDPLKLPWAELGIDIVIEGTGVFVDGPGAGKHIQAGAKKV 195
Query: 193 VISAPS--ADAPMFVVGVNEKSYDPKM-NVVSNASCTTNCLAPLAKVVHEEFGIVEGLMX 249
+I+AP+ AD P +V+GVNE Y ++ N++SNASCTTNCLAP K++ EEFGIV+G M
Sbjct: 196 IITAPAKGADIPTYVLGVNEGDYSHEVANIISNASCTTNCLAPFVKILDEEFGIVKGTMT 255
Query: 250 XXXXXXXXXXXXDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVP 309
D S +D R R AA NI+P+STGAAKAV VLP+L GKL G+A RVP
Sbjct: 256 TTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTSTGAAKAVALVLPQLKGKLNGIALRVP 314
Query: 310 TPNVSVVDLTCRIEKSA-SYDDVKAAIKAASEGALKGILGYTDEDVVSNDFVGDARSSIF 368
TPNVSVVDL K+ + DDV AA + A+ G L GIL D +VS DF SS
Sbjct: 315 TPNVSVVDLVINTVKTGITADDVNAAFRKAAAGPLSGILDVCDVPLVSVDFRCSDVSSTI 374
Query: 369 DAKAGIGLSSSFMKLVSWYDNEWGYSNRVLDLIAHM 404
DA + + +K+V+WYDNEWGYS RV+DL AH+
Sbjct: 375 DASLTMVMGDDMVKVVAWYDNEWGYSQRVVDL-AHL 409
>AK109016
Length = 377
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 162/331 (48%), Positives = 213/331 (64%), Gaps = 6/331 (1%)
Query: 74 EKTKVGINGFGRIGRLVLRIATSRDD--IEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGS 131
+K KV INGFGRIGR +R +R D ++VVA+ND K +++ KYDST G F
Sbjct: 40 KKIKVAINGFGRIGRNFMRCLETRTDSLLDVVAINDSG-GVKQASHLLKYDSTLGKFDAE 98
Query: 132 IKVVDDSTLEINGKKVTITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKK 191
+KVVDD + +NGK + + S RDP +PWG+ + V+E +GVF T AS H++ GAKK
Sbjct: 99 VKVVDDGHISVNGKVIRVVSSRDPTKLPWGDLDIDLVIEGTGVFIDTPGASKHIQAGAKK 158
Query: 192 VVISAPS--ADAPMFVVGVNEKSYDPKMNVVSNASCTTNCLAPLAKVVHEEFGIVEGLMX 249
V+I+AP+ +D P +VVGVN Y ++SNASCTTNCLAP KV+ E+FGIV+G M
Sbjct: 159 VLITAPAKGSDIPTYVVGVNAHDYKHSDAIISNASCTTNCLAPFVKVLDEKFGIVKGTMT 218
Query: 250 XXXXXXXXXXXXDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVP 309
D S +D R R AA NI+P++TGAAKAV VLP+L GKL G+A RVP
Sbjct: 219 TTHSYTGDQRLLDA-SHRDLRRARAAALNIVPTTTGAAKAVALVLPKLKGKLNGIALRVP 277
Query: 310 TPNVSVVDLTCRIEKSASYDDVKAAIKAASEGALKGILGYTDEDVVSNDFVGDARSSIFD 369
TPNVSVVDL ++EK ++V A K A+ GAL G+L DE +VS DF SS D
Sbjct: 278 TPNVSVVDLVVQVEKKTFAEEVNNAFKEAANGALNGVLAVGDEPLVSVDFRCTDVSSTID 337
Query: 370 AKAGIGLSSSFMKLVSWYDNEWGYSNRVLDL 400
+ + + +K+V+WYDNEWGYS RV+DL
Sbjct: 338 SSLTMVMGDDMVKVVAWYDNEWGYSQRVVDL 368
>Os04g0459500 Similar to GADPH (383 AA) (Fragment)
Length = 402
Score = 266 bits (679), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 161/373 (43%), Positives = 218/373 (58%), Gaps = 7/373 (1%)
Query: 32 LRSAGSAQFTSIAASSSFARNIEPLRAIATQAPPAVPQYSSGEKTKVGINGFGRIGRLVL 91
LRS+ S A S F N R A + + K KV INGFGRIGR L
Sbjct: 24 LRSSSSLPLRRNATSDDFM-NAVSFRTHAVGTSGGARRAPTEAKLKVAINGFGRIGRNFL 82
Query: 92 RIATSRDD---IEVVAVNDPFIDAKYMAYMFKYDSTHGPFKGSIKVVDDSTLEINGKKVT 148
R R D ++V+A+ND K +++ KYDST G F +K V D+ + ++GK +
Sbjct: 83 RCWHGRGDSSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDADVKPVGDNAISVDGKVIK 141
Query: 149 ITSKRDPADIPWGNFGAEYVVESSGVFTTTEKASAHLKGGAKKVVISAP-SADAPMFVVG 207
+ S R+P+++PWG G + V+E +GVF + A H++ GAKKV+I+AP D P +VVG
Sbjct: 142 VVSDRNPSNLPWGELGIDLVIEGTGVFVDRDGAGKHIQAGAKKVLITAPGKGDIPTYVVG 201
Query: 208 VNEKSYDPKMNVVSNASCTTNCLAPLAKVVHEEFGIVEGLMXXXXXXXXXXXXXDGPSMK 267
VN Y P ++SNASCTTNCLAP K++ ++FGI++G M D S +
Sbjct: 202 VNADQYSPDEPIISNASCTTNCLAPFVKILDQKFGIIKGTMTTTHSYTGDQRLLDA-SHR 260
Query: 268 DWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTPNVSVVDLTCRIEKSAS 327
D R R AA NI+P+STGAAKAV VLP L GKL G+A RVPTPNVSVVDL ++ K
Sbjct: 261 DLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTL 320
Query: 328 YDDVKAAIKAASEGALKGILGYTDEDVVSNDFVGDARSSIFDAKAGIGLSSSFMKLVSWY 387
++V A + ++ LKGIL D +VS DF S DA + + +K+++WY
Sbjct: 321 AEEVNQAFRDSAANELKGILEVCDVPLVSVDFRCSDVSCTIDASLSMVMGDDMVKVIAWY 380
Query: 388 DNEWGYSNRVLDL 400
DNEWGYS RV+DL
Sbjct: 381 DNEWGYSQRVVDL 393
>D21280
Length = 95
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 79 GINGFGRIGRLVLRIATSRDDIEVVAVNDPFIDAKYMAYMFKYDSTHGPFK-GSIKVVDD 137
GINGFGRIGRL R+A +D+E+VAVN PFI YM YMFKYD+ HG +K +KV D
Sbjct: 4 GINGFGRIGRLXARVALQSEDVELVAVNXPFITTXYMTYMFKYDTVHGQWKHHEVKVKDS 63
Query: 138 STLEINGKKVTITSKRDPADIPWGNFGAEYVV 169
TL K+V + R+P +IPW GAEYV
Sbjct: 64 KTLIFGTKEVAVFGCRNPEEIPWAAAGAEYVC 95
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.315 0.131 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,262,026
Number of extensions: 493601
Number of successful extensions: 1453
Number of sequences better than 1.0e-10: 13
Number of HSP's gapped: 1433
Number of HSP's successfully gapped: 13
Length of query: 411
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 308
Effective length of database: 11,657,759
Effective search space: 3590589772
Effective search space used: 3590589772
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 157 (65.1 bits)