BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os02g0102300 Os02g0102300|AK067143
         (137 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os02g0102300  Similar to Thiosulfate sulfurtransferase (EC 2...   253   3e-68
Os04g0249600  Rhodanese-like domain containing protein            145   7e-36
Os02g0157600  Rhodanese-like domain containing protein            105   7e-24
Os12g0428000  Rhodanese-like domain containing protein            105   7e-24
Os06g0725000  Similar to Ntdin                                    105   1e-23

>Os02g0102300 Similar to Thiosulfate sulfurtransferase (EC 2.8.1.1) (Rhodanese)
           (Senescence- associated protein) (Sulfurtransferase
           protein 16) (AtStr16)
          Length = 137

 Score =  253 bits (646), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 122/137 (89%), Positives = 122/137 (89%)

Query: 1   MAPPYETSAAGSEXXXXXXXXXXXXXXXLITSAGHRYVDVRTEEEMNKGHLHNSLNVPFM 60
           MAPPYETSAAGSE               LITSAGHRYVDVRTEEEMNKGHLHNSLNVPFM
Sbjct: 1   MAPPYETSAAGSESPVPVVTVDVAAASDLITSAGHRYVDVRTEEEMNKGHLHNSLNVPFM 60

Query: 61  FVTPQGKEKNPLFVEQFSSLVSKEEHVVVGCQSGKRSELACVDLLEAGFKNVKNMGGGYA 120
           FVTPQGKEKNPLFVEQFSSLVSKEEHVVVGCQSGKRSELACVDLLEAGFKNVKNMGGGYA
Sbjct: 61  FVTPQGKEKNPLFVEQFSSLVSKEEHVVVGCQSGKRSELACVDLLEAGFKNVKNMGGGYA 120

Query: 121 AWLDNGFPINTPPHTMY 137
           AWLDNGFPINTPPHTMY
Sbjct: 121 AWLDNGFPINTPPHTMY 137



>Os04g0249600 Rhodanese-like domain containing protein
          Length = 138

 Score =  145 bits (367), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 66/104 (63%), Positives = 80/104 (76%)

Query: 29  LITSAGHRYVDVRTEEEMNKGHLHNSLNVPFMFVTPQGKEKNPLFVEQFSSLVSKEEHVV 88
           L+ S GH Y+DVRTEEE  KGH+ NSLNVPF+F TPQGKEKN  F+EQ +    KE++++
Sbjct: 29  LVGSGGHSYLDVRTEEEFKKGHVENSLNVPFLFFTPQGKEKNTKFIEQVALHYDKEDNII 88

Query: 89  VGCQSGKRSELACVDLLEAGFKNVKNMGGGYAAWLDNGFPINTP 132
           VGC SG RSELA  DL+ AGFKNVKNM GGY AW++NG  +N P
Sbjct: 89  VGCLSGVRSELASADLIAAGFKNVKNMEGGYMAWVENGLAVNKP 132



>Os02g0157600 Rhodanese-like domain containing protein
          Length = 139

 Score =  105 bits (263), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 69/95 (72%), Gaps = 1/95 (1%)

Query: 30  ITSAGHRYVDVRTEEEMNKGHLHNSLNVPF-MFVTPQGKEKNPLFVEQFSSLVSKEEHVV 88
           + S+GH Y+DVR  ++ +K H   + N+ + + VTP GKEKNP FV++ +SL  K+EH++
Sbjct: 33  LMSSGHHYLDVRLGKDFDKAHADGARNISYYLSVTPSGKEKNPHFVDEVASLFGKDEHLI 92

Query: 89  VGCQSGKRSELACVDLLEAGFKNVKNMGGGYAAWL 123
           V C +G RS LA  DLL+AGFKNV+N+ GGY ++L
Sbjct: 93  VACNTGVRSRLATKDLLDAGFKNVRNLKGGYQSFL 127



>Os12g0428000 Rhodanese-like domain containing protein
          Length = 162

 Score =  105 bits (263), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 48/96 (50%), Positives = 71/96 (73%), Gaps = 1/96 (1%)

Query: 29  LITSAGHRYVDVRTEEEMNKGHLHNSLNVPF-MFVTPQGKEKNPLFVEQFSSLVSKEEHV 87
           L++S  H+Y+DVR  E+ +KGH+  + NVP+ + VTP+ KEKNP FV+Q ++L    +H+
Sbjct: 61  LLSSGRHQYLDVRMWEDFDKGHVAGARNVPYYLSVTPRAKEKNPHFVQQVAALYHAHDHI 120

Query: 88  VVGCQSGKRSELACVDLLEAGFKNVKNMGGGYAAWL 123
           +VGC+SG RS+LA  DL+ AGFKNV+ + GGY + L
Sbjct: 121 IVGCRSGVRSKLATADLVAAGFKNVRILEGGYLSLL 156



>Os06g0725000 Similar to Ntdin
          Length = 116

 Score =  105 bits (261), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 67/101 (66%)

Query: 30  ITSAGHRYVDVRTEEEMNKGHLHNSLNVPFMFVTPQGKEKNPLFVEQFSSLVSKEEHVVV 89
           +  AGHRY+DVRTE E   GH   ++N+P+M+ T  G  KN  F+E+ S+   KE+ ++V
Sbjct: 15  LQQAGHRYLDVRTEGEFAGGHPVGAVNIPYMYKTGSGLTKNTHFLEKVSTTFGKEDEIIV 74

Query: 90  GCQSGKRSELACVDLLEAGFKNVKNMGGGYAAWLDNGFPIN 130
           GCQSGKRS +A  +L  AGF  V ++ GG++AW +N  P N
Sbjct: 75  GCQSGKRSLMAASELCSAGFTAVTDIAGGFSAWKENELPTN 115



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.315    0.132    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,826,373
Number of extensions: 169147
Number of successful extensions: 321
Number of sequences better than 1.0e-10: 5
Number of HSP's gapped: 319
Number of HSP's successfully gapped: 5
Length of query: 137
Length of database: 17,035,801
Length adjustment: 90
Effective length of query: 47
Effective length of database: 12,336,541
Effective search space: 579817427
Effective search space used: 579817427
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 150 (62.4 bits)