Os02g0157600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Rhodanese-like domain containing protein.
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Os02g0157600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Rhodanese-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 159.15 | 0.593 | 9.22 | -2.85 | 1.72 | -2.72 | -0.181 | 2.18 | -0.555 | 5.46 | 24.77 | 297 | -- | -- |
| 163.23 | 0.595 | 9.18 | -2.54 | 1.68 | -3.04 | 0.205 | -- | -0.474 | 5.57 | 24.09 | 332 | -- | -- |
| 158.93 | 0.587 | 9.21 | -2.82 | 1.68 | -2.76 | -- | 2.01 | -0.529 | 5.58 | 24.44 | 335 | -- | -- |
| 163.37 | 0.595 | 9.17 | -2.52 | 1.67 | -3.06 | -- | -- | -0.449 | 5.52 | 24 | 322 | -- | -- |
| 252.11 | 0.74 | 9.25 | -2.95 | -- | -3.02 | -- | 1.45 | -0.568 | -- | 25 | 1378 | -- | -- |
| 286.98 | 0.794 | 9.06 | -1.77 | 1.39 | -- | 0.517 | -- | 0.0787 | 5.76 | -- | -- | -- | -- |
| 287.64 | 0.794 | 9.06 | -1.77 | 1.39 | -- | -- | -- | 0.0765 | 5.75 | -- | -- | -- | -- |
| 255.54 | 0.745 | 9.22 | -2.7 | -- | -3.35 | -- | -- | -0.49 | -- | 23.58 | 1402 | -- | -- |
| 310 | 0.82 | 9.07 | -- | 1.51 | -1.87 | -- | -- | 0.0285 | 5.12 | 24.35 | 40 | -- | -- |
| 387.83 | 0.92 | 9.08 | -1.72 | -- | -- | -- | -- | 0.109 | -- | -- | -- | -- | -- |
| 369.87 | 0.9 | 9.01 | -- | 1.36 | -- | -- | -- | 0.273 | 5.81 | -- | -- | -- | -- |
| 414.91 | 0.949 | 9.11 | -- | -- | -1.77 | -- | -- | -0.0192 | -- | 25.24 | 1273 | -- | -- |
| 466.13 | 1.01 | 9.04 | -- | -- | -- | -- | -- | 0.301 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 157.77 | temperature | 25 | 270 | < th | dose dependent | rect. | 11 | 23 |
| 2 | 157.97 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 20 |
| 8 | 158.92 | temperature | 25 | 270 | < th | dose dependent | rect. | 19 | 23 |
| 9 | 159.05 | temperature | 25 | 270 | < th | dose dependent | rect. | 8 | 23 |
| 10 | 159.06 | temperature | 25 | 720 | < th | dose dependent | rect. | 7 | 20 |
| 14 | 159.53 | temperature | 25 | 270 | < th | dose dependent | no | NA | NA |
| 17 | 159.66 | temperature | 25 | 90 | < th | dose dependent | rect. | 22 | 23 |
| 47 | 160.81 | temperature | 25 | 10 | < th | dose dependent | rect. | 22 | 23 |
| 78 | 161.39 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |
| 104 | 161.68 | temperature | 25 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 108 | 161.70 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 113 | 161.71 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 23 |
| 114 | 161.74 | temperature | 25 | 1440 | < th | dose dependent | sin | 16 | NA |
| 115 | 161.74 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 23 |
| 116 | 161.75 | temperature | 25 | 1440 | < th | dose dependent | rect. | 13 | 23 |
| 117 | 161.75 | temperature | 25 | 1440 | < th | dose dependent | rect. | 15 | 23 |
| 163 | 162.09 | temperature | 25 | 270 | < th | dose dependent | rect. | 15 | 23 |
| 179 | 162.25 | temperature | 25 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 182 | 162.28 | temperature | 25 | 30 | < th | dose dependent | no | NA | NA |
| 185 | 162.31 | temperature | 25 | 30 | < th | dose dependent | rect. | 19 | 23 |
| 189 | 162.34 | temperature | 25 | 30 | < th | dose dependent | rect. | 1 | 23 |
| 195 | 162.37 | temperature | 25 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 196 | 162.37 | temperature | 25 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 208 | 162.48 | temperature | 25 | 30 | < th | dose dependent | rect. | 17 | 23 |
| 213 | 162.54 | temperature | 25 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 264 | 163.01 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 7 |
| 284 | 163.17 | temperature | 25 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 402 | 164.70 | temperature | 25 | 1440 | < th | dose dependent | sin | 2 | NA |
| 656 | 169.32 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 2 |
| 761 | 170.61 | temperature | 25 | 1440 | < th | dose dependent | rect. | 4 | 2 |
| 762 | 170.62 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 11 |
| 822 | 171.29 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 2 |