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Os02g0102300

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Thiosulfate sulfurtransferase (EC 2.8.1.1) (Rhodanese) (Senescence- associated protein) (Sulfurtransferase protein 16) (AtStr16).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.83 (0.0492) R2 : 0.451
β1 : -2.99 (0.184) R2dD : 0.368 R2D : 0.106
β2 : 2.69 (0.219) R2dC : 0.569 R2C : -0.386
β3 : 4.03 (0.323) R2dE : 0.631 R2E : -0.646
β4 : 3.11 (0.57) R2dD*C : 0.0359 R2D*C : -0.0165
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.959 (0.109) R2dN8 : 0.144 R2N8 : -0.0606
σ : 0.89
deviance : 365.32
__
_____
C
peak time of C : 17.5
E
wheather : temperature
threshold : 2.9
memory length : 1082
response mode : > th
dose dependency : dose dependent
G
type of G : sin
peak or start time of G : 8.07
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = sin)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
365.18 0.898 8.85 -3.11 2.77 4.1 2.7 -0.847 -0.995 17.6 3.438 1058 7.77 --
365.32 0.89 8.83 -2.99 2.69 4.03 3.11 -- -0.959 17.5 2.9 1082 8.07 --
371.33 0.897 8.93 -3.49 3.67 4.85 -- -3.92 -1.12 16.9 -5.529 1064 9.15 --
388.64 0.918 8.82 -3.01 2.27 3.67 -- -- -0.941 17.6 3.149 1140 8.13 --
442.13 0.979 8.83 -3.78 -- 2.08 -- -2.34 -0.989 -- -40.8 4370 12.7 --
486.01 1.03 8.68 -2.3 0.586 -- 2.4 -- -0.48 16.2 -- -- -- --
498.19 1.05 8.66 -2.27 0.634 -- -- -- -0.466 14.6 -- -- -- --
422.92 0.958 8.76 -3.24 -- 2.36 -- -- -0.949 -- -47.16 7474 16.5 --
598.34 1.14 8.68 -- 1.9 2.26 -- -- -0.42 16.8 3.174 1028 8 --
521.76 1.07 8.67 -2.29 -- -- -- -- -0.482 -- -- -- -- --
633.76 1.18 8.61 -- 0.678 -- -- -- -0.214 14.6 -- -- -- --
632.13 1.17 8.61 -- -- 0.906 -- -- -0.259 -- -456.5 7446 17.3 --
660.68 1.2 8.61 -- -- -- -- -- -0.228 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 353.40 wind 9.0 43200 > th dose dependent rect. 20 1
3 362.05 wind 9.0 43200 > th dose dependent rect. 17 14
4 362.40 wind 9.0 43200 > th dose independent rect. 20 1
6 363.89 wind 9.0 43200 < th dose independent rect. 20 1
13 366.45 wind 9.0 43200 > th dose dependent rect. 17 7
19 367.78 temperature 15.0 720 > th dose dependent rect. 18 19
20 368.32 temperature 30.0 1440 < th dose dependent rect. 17 1
22 368.83 temperature 15.0 720 > th dose dependent rect. 18 17
23 369.10 wind 9.0 43200 > th dose dependent rect. 17 4
24 369.27 wind 9.0 43200 > th dose independent rect. 17 15
26 369.73 temperature 30.0 1440 < th dose dependent rect. 17 4
36 370.93 wind 9.0 43200 > th dose independent rect. 18 13
51 371.85 temperature 15.0 1440 > th dose dependent rect. 17 4
72 373.03 temperature 15.0 1440 > th dose dependent rect. 20 1
82 373.25 temperature 30.0 1440 < th dose dependent rect. 20 1
93 373.65 temperature 10.0 720 > th dose dependent sin 11 NA
113 374.30 wind 9.0 43200 > th dose independent rect. 18 6
114 374.34 wind 9.0 43200 < th dose independent rect. 17 15
133 375.02 wind 9.0 43200 > th dose dependent sin 13 NA
142 375.38 wind 9.0 43200 < th dose independent rect. 18 13
148 375.58 humidity 60.0 14400 < th dose dependent rect. 17 16
174 376.55 precipitation 0.1 43200 > th dose dependent rect. 17 1
200 377.14 wind 9.0 43200 < th dose independent rect. 18 6
205 377.29 precipitation 0.1 14400 < th dose independent rect. 20 1
206 377.29 precipitation 0.1 14400 < th dose dependent rect. 20 1
213 377.46 precipitation 0.1 14400 > th dose independent rect. 20 1
218 377.67 precipitation 0.1 14400 > th dose dependent rect. 20 1
222 377.72 wind 9.0 43200 < th dose independent rect. 18 11
242 378.10 atmosphere 995.0 43200 < th dose dependent rect. 15 1
275 378.98 atmosphere 995.0 43200 < th dose independent rect. 15 1
285 379.29 wind 9.0 43200 > th dose dependent rect. 20 4
303 379.56 atmosphere 995.0 43200 > th dose independent rect. 15 1
308 379.61 humidity 60.0 14400 < th dose independent rect. 17 3
331 379.80 temperature 30.0 1440 < th dose dependent sin 17 NA
336 379.83 wind 9.0 43200 > th dose dependent rect. 20 10
345 379.92 wind 9.0 43200 < th dose independent rect. 18 4
352 379.97 temperature 15.0 1440 > th dose dependent sin 17 NA
367 380.17 wind 9.0 43200 > th dose independent rect. 18 4
376 380.34 precipitation 0.1 14400 > th dose dependent rect. 20 6
384 380.43 humidity 50.0 14400 > th dose independent rect. 17 17
417 380.75 wind 9.0 43200 > th dose independent sin 12 NA
429 380.89 precipitation 0.1 43200 < th dose independent rect. 17 1
430 380.89 precipitation 0.1 43200 < th dose dependent rect. 17 1
461 381.21 precipitation 0.1 43200 > th dose independent rect. 17 1
470 381.30 humidity 60.0 14400 > th dose independent rect. 18 1
474 381.34 humidity 60.0 14400 < th dose dependent rect. 17 2
562 382.05 temperature 30.0 270 < th dose dependent rect. 5 23
577 382.15 temperature 30.0 270 < th dose dependent rect. 17 22
628 382.64 temperature 30.0 720 < th dose dependent rect. 17 20
704 383.24 humidity 50.0 14400 > th dose independent rect. 16 19
766 383.65 humidity 60.0 14400 > th dose independent rect. 18 14
784 383.81 humidity 50.0 14400 < th dose dependent rect. 16 19
824 384.13 humidity 50.0 14400 < th dose independent rect. 16 19
832 384.16 humidity 50.0 4320 > th dose dependent rect. 21 1
872 384.33 humidity 60.0 14400 > th dose independent rect. 18 6
893 384.47 humidity 60.0 14400 > th dose independent rect. 18 11
905 384.55 humidity 60.0 14400 > th dose independent rect. 18 8
929 384.69 wind 9.0 43200 > th dose independent rect. 20 5