Os04g0249600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Rhodanese-like domain containing protein.
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Os04g0249600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Rhodanese-like domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 99.5 | 0.469 | 9.33 | -1.5 | 1.37 | -0.95 | -0.651 | 1.55 | 1.44 | 22.8 | 81 | 88 | -- | -- |
| 102.17 | 0.471 | 9.33 | -1.56 | 1.4 | -0.974 | -1.22 | -- | 1.49 | 22.5 | 155.6 | 123 | -- | -- |
| 100.3 | 0.47 | 9.32 | -1.5 | 1.32 | -1.04 | -- | 2.31 | 1.44 | 23.1 | 80.29 | 82 | -- | -- |
| 107.76 | 0.483 | 9.33 | -1.51 | 1.37 | -0.871 | -- | -- | 1.46 | 22.8 | 86.6 | 85 | -- | -- |
| 176.68 | 0.622 | 9.3 | -1.45 | -- | -2.05 | -- | 2.34 | 1.44 | -- | 85.81 | 8 | -- | -- |
| 115.25 | 0.503 | 9.32 | -1.58 | 1.63 | -- | -1.04 | -- | 1.48 | 23.7 | -- | -- | -- | -- |
| 119.9 | 0.513 | 9.32 | -1.54 | 1.64 | -- | -- | -- | 1.48 | 23.7 | -- | -- | -- | -- |
| 186.3 | 0.638 | 9.3 | -1.46 | -- | -1.99 | -- | -- | 1.44 | -- | 86 | 6 | -- | -- |
| 166.35 | 0.601 | 9.3 | -- | 1.37 | -0.977 | -- | -- | 1.62 | 22.6 | 82.7 | 105 | -- | -- |
| 288.88 | 0.794 | 9.29 | -1.49 | -- | -- | -- | -- | 1.5 | -- | -- | -- | -- | -- |
| 182.58 | 0.632 | 9.28 | -- | 1.62 | -- | -- | -- | 1.65 | 23.7 | -- | -- | -- | -- |
| 242.25 | 0.727 | 9.26 | -- | -- | -2.03 | -- | -- | 1.59 | -- | 85.49 | 5 | -- | -- |
| 347.82 | 0.871 | 9.25 | -- | -- | -- | -- | -- | 1.67 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 95.28 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 4 | 8 |
| 3 | 95.36 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 3 | 9 |
| 9 | 95.81 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 6 | 6 |
| 43 | 96.36 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 5 | 7 |
| 45 | 96.36 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 20 | 16 |
| 53 | 96.39 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 22 | 14 |
| 70 | 96.64 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 9 | 9 |
| 109 | 97.21 | humidity | 70.0 | 1440 | < th | dose independent | rect. | 9 | 3 |
| 110 | 97.23 | wind | 1.0 | 1440 | < th | dose independent | rect. | 7 | 13 |
| 114 | 97.28 | wind | 1.0 | 1440 | > th | dose independent | rect. | 7 | 13 |
| 128 | 97.45 | humidity | 80.0 | 1440 | < th | dose dependent | rect. | 9 | 1 |
| 133 | 97.53 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 140 | 97.61 | wind | 3.0 | 1440 | < th | dose dependent | rect. | 11 | 4 |
| 154 | 97.80 | humidity | 70.0 | 1440 | < th | dose independent | sin | 8 | NA |
| 168 | 97.99 | wind | 1.0 | 1440 | < th | dose independent | sin | 22 | NA |
| 176 | 98.04 | wind | 1.0 | 1440 | < th | dose independent | rect. | 13 | 7 |
| 180 | 98.08 | wind | 1.0 | 1440 | > th | dose independent | sin | 22 | NA |
| 185 | 98.13 | humidity | 70.0 | 1440 | > th | dose independent | sin | 8 | NA |
| 206 | 98.29 | wind | 1.0 | 1440 | > th | dose independent | rect. | 13 | 7 |
| 227 | 98.46 | wind | 1.0 | 1440 | < th | dose independent | rect. | 11 | 9 |
| 245 | 98.54 | humidity | 50.0 | 90 | > th | dose dependent | sin | 0 | NA |
| 257 | 98.61 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 6 | 15 |
| 261 | 98.66 | wind | 1.0 | 1440 | > th | dose independent | rect. | 13 | 5 |
| 282 | 98.72 | wind | 1.0 | 1440 | > th | dose independent | rect. | 11 | 9 |
| 285 | 98.72 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 16 | 23 |
| 290 | 98.76 | wind | 1.0 | 1440 | < th | dose independent | rect. | 13 | 5 |
| 305 | 98.83 | wind | 1.0 | 1440 | < th | dose dependent | sin | 22 | NA |
| 308 | 98.84 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 6 | 14 |
| 319 | 98.89 | humidity | 50.0 | 10 | > th | dose dependent | sin | 23 | NA |
| 322 | 98.89 | humidity | 90.0 | 90 | < th | dose dependent | rect. | 22 | 23 |
| 335 | 98.93 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 24 | 20 |
| 355 | 98.98 | humidity | 90.0 | 10 | < th | dose dependent | rect. | 2 | 19 |
| 387 | 99.05 | wind | 1.0 | 1440 | > th | dose independent | rect. | 4 | 16 |
| 409 | 99.12 | humidity | 70.0 | 90 | < th | dose independent | rect. | 15 | 23 |
| 431 | 99.17 | humidity | 70.0 | 90 | < th | dose independent | rect. | 16 | 21 |
| 467 | 99.24 | humidity | 80.0 | 90 | < th | dose dependent | sin | 3 | NA |
| 502 | 99.30 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 16 | 23 |
| 503 | 99.31 | wind | 1.0 | 1440 | < th | dose independent | rect. | 4 | 16 |
| 540 | 99.40 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 13 | 23 |
| 583 | 99.51 | humidity | 70.0 | 10 | < th | dose independent | rect. | 16 | 20 |
| 587 | 99.51 | humidity | 80.0 | 90 | < th | dose dependent | rect. | 6 | 20 |
| 628 | 99.54 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 7 | 20 |
| 637 | 99.55 | humidity | 80.0 | 90 | < th | dose dependent | no | NA | NA |
| 656 | 99.56 | humidity | 80.0 | 720 | < th | dose dependent | sin | 8 | NA |
| 672 | 99.57 | wind | 1.0 | 4320 | > th | dose independent | rect. | 15 | 5 |
| 684 | 99.57 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 9 | 23 |
| 685 | 99.58 | humidity | 80.0 | 10 | < th | dose dependent | no | NA | NA |
| 744 | 99.65 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 5 | 4 |
| 785 | 99.75 | wind | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 786 | 99.75 | wind | 3.0 | 1440 | < th | dose independent | rect. | 9 | 6 |
| 809 | 99.79 | humidity | 70.0 | 10 | < th | dose dependent | sin | 9 | NA |
| 815 | 99.79 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 17 | 22 |
| 831 | 99.83 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 5 | 4 |
| 833 | 99.83 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 17 | 19 |
| 852 | 99.85 | humidity | 80.0 | 10 | < th | dose dependent | rect. | 14 | 23 |
| 861 | 99.87 | wind | 3.0 | 1440 | > th | dose independent | rect. | 9 | 6 |
| 956 | 99.95 | radiation | 30.0 | 720 | > th | dose independent | rect. | 16 | 16 |
| 975 | 99.97 | humidity | 60.0 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 998 | 100.02 | humidity | 70.0 | 90 | > th | dose independent | rect. | 18 | 23 |