BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0948900 Os01g0948900|AK100894
(337 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0948900 Ankyrin repeat containing protein 602 e-172
Os11g0141900 BTB domain containing protein 355 4e-98
Os12g0138500 Ankyrin repeat containing protein 339 2e-93
Os01g0194300 Similar to NPR1 107 1e-23
Os01g0767900 Similar to Ankyrin repeat BTB/POZ domain-conta... 102 4e-22
Os03g0667100 BTB domain containing protein 98 9e-21
>Os01g0948900 Ankyrin repeat containing protein
Length = 337
Score = 602 bits (1552), Expect = e-172, Method: Compositional matrix adjust.
Identities = 301/337 (89%), Positives = 301/337 (89%)
Query: 1 MCVDGCVQKQLAGMVEKASIEDVMKVLMASRKQDLHQLWTTCSHLVAKSGLPPEVLAKHL 60
MCVDGCVQKQLAGMVEKASIEDVMKVLMASRKQDLHQLWTTCSHLVAKSGLPPEVLAKHL
Sbjct: 1 MCVDGCVQKQLAGMVEKASIEDVMKVLMASRKQDLHQLWTTCSHLVAKSGLPPEVLAKHL 60
Query: 61 PIDVVAKIDELRLKSMSRRSPFLXXXXXXXXXXXXXXXXXXXXELDDHHKIRRMRRALDS 120
PIDVVAKIDELRLKSMSRRSPFL ELDDHHKIRRMRRALDS
Sbjct: 61 PIDVVAKIDELRLKSMSRRSPFLSHHHHHPHAAAAGIEASSAAELDDHHKIRRMRRALDS 120
Query: 121 SDVELVKLMVMGEGLNLDDALALHYAVENCSREVVKALLELGAADVNHPAGPAGKTPLHV 180
SDVELVKLMVMGEGLNLDDALALHYAVENCSREVVKALLELGAADVNHPAGPAGKTPLHV
Sbjct: 121 SDVELVKLMVMGEGLNLDDALALHYAVENCSREVVKALLELGAADVNHPAGPAGKTPLHV 180
Query: 181 AAEMVCPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLAHIEPNKLRL 240
AAEMVCPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLAHIEPNKLRL
Sbjct: 181 AAEMVCPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLAHIEPNKLRL 240
Query: 241 CLELVQSAAMVMSREDAQTAAVNAAPIYGESPXXXXXXXVYNASGTSSSMVNLSLDNRMV 300
CLELVQSAAMVMSREDAQTAAVNAAPIYGESP VYNASGTSSSMVNLSLDNRMV
Sbjct: 241 CLELVQSAAMVMSREDAQTAAVNAAPIYGESPGGGGGGGVYNASGTSSSMVNLSLDNRMV 300
Query: 301 YLNLGMDAQFGKMNXXXXXXXXXSRGPSSLFSPHGFP 337
YLNLGMDAQFGKMN SRGPSSLFSPHGFP
Sbjct: 301 YLNLGMDAQFGKMNDGGDGDDGGSRGPSSLFSPHGFP 337
>Os11g0141900 BTB domain containing protein
Length = 494
Score = 355 bits (910), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 191/335 (57%), Positives = 237/335 (70%), Gaps = 21/335 (6%)
Query: 7 VQKQLAGMVEKASIEDVMKVLMASRKQDLHQLWTTCSHLVAKSGLPPEVLAKHLPIDVVA 66
VQKQL MV++AS++DVMKVLMASRK ++ +LW TCSHLVA+SGL ++LAKHLPIDVVA
Sbjct: 175 VQKQLESMVKEASVDDVMKVLMASRKFEMQELWATCSHLVARSGLSADLLAKHLPIDVVA 234
Query: 67 KIDELRLKS-----MSRRSPFLXXXXXXXXXXXXXXXXXXXXELDDHHKIRRMRRALDSS 121
KI+E+R KS + RSPFL D +KIRRMRRALD++
Sbjct: 235 KIEEIRAKSPLAAVAAPRSPFLTHHYLPMNPASSAA--------DRDNKIRRMRRALDAA 286
Query: 122 DVELVKLMVMGEGLNLDDALALHYAVENCSREVVKALLELGAADVNHPAGPAGKTPLHVA 181
D+ELVKLMVMGEGL+LDDALA+HYAV++C+R+VVKALLELGAADVN AGP GKT LH+A
Sbjct: 287 DIELVKLMVMGEGLDLDDALAVHYAVQHCNRDVVKALLELGAADVNSRAGPTGKTALHLA 346
Query: 182 AEMVCPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLAHIEPNKLRLC 241
AEMV PDMV+VLLDHHADPN RT+DGVTPLD+LR+LTS+FLFKGAVPGL HIEPNKLRLC
Sbjct: 347 AEMVSPDMVSVLLDHHADPNSRTLDGVTPLDVLRSLTSEFLFKGAVPGLTHIEPNKLRLC 406
Query: 242 LELVQSAAMVMSREDAQTAAVNAAPIYGESPXXXXXXXVYNASGTSSSMVNLSLDNRMVY 301
LELVQSA MV +R+D AP+ G + + S S+V+L++++ ++Y
Sbjct: 407 LELVQSAVMVTTRDD-------GAPVTGGAEAGGSDGGNFPRSDADDSLVSLTMNSTLMY 459
Query: 302 LNLGMDAQFGKMNXXXXXXXXXSRGPSSLFSPHGF 336
M A S P +++ P+GF
Sbjct: 460 QGQEMAAAVAAGEGRKSNNGRGSP-PPAMYFPNGF 493
>Os12g0138500 Ankyrin repeat containing protein
Length = 312
Score = 339 bits (870), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 187/330 (56%), Positives = 232/330 (70%), Gaps = 26/330 (7%)
Query: 14 MVEKASIEDVMKVLMASRKQDLHQLWTTCSHLVAKSGLPPEVLAKHLPIDVVAKIDELRL 73
MV++AS++DVMKVLMASRK ++ +LW TCSHLVA+SGL ++LAKHLPIDVVAKI+E+R
Sbjct: 1 MVKEASVDDVMKVLMASRKFEMQELWATCSHLVARSGLSADLLAKHLPIDVVAKIEEIRA 60
Query: 74 KS-----MSRRSPFLXXXXXXXXXXXXXXXXXXXXELDDHHKIRRMRRALDSSDVELVKL 128
KS + RSPFL D +KIRRMRRALD++D+ELVKL
Sbjct: 61 KSPLAAAAAPRSPFLTHHYLPMNPASSAA--------DRDNKIRRMRRALDAADIELVKL 112
Query: 129 MVMGEGLNLDDALALHYAVENCSREVVKALLELGAADVNHPAGPAGKTPLHVAAEMVCPD 188
MVMGEGL+LDDALA+HYAV++C+R+VVKALLELGAADVN AGP GKT LH+AAEMV PD
Sbjct: 113 MVMGEGLDLDDALAVHYAVQHCNRDVVKALLELGAADVNSRAGPTGKTALHLAAEMVSPD 172
Query: 189 MVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLAHIEPNKLRLCLELVQSA 248
MV+VLLDHHADPN RT+DGVTPLD+LR+LTS+FLFKGAVPGL HIEPNKLRLCLELVQSA
Sbjct: 173 MVSVLLDHHADPNSRTLDGVTPLDVLRSLTSEFLFKGAVPGLTHIEPNKLRLCLELVQSA 232
Query: 249 AMVMSREDAQTAAVNAAPIYGESPXXXXXXXVYNASGTSSSMVNLSLDNRMVYLNLGMDA 308
MV +R+D AP+ G + S S+V+L++++ ++Y M A
Sbjct: 233 VMVTTRDD-------GAPVTGGEAGGSDGGN-FPRSDADDSLVSLTMNSTLMYQGQEMAA 284
Query: 309 QFGKMNXXXXXXXXXSRG--PSSLFSPHGF 336
RG P +++ P+GF
Sbjct: 285 AVA---AGEGRKSNNGRGSPPPAMYFPNGF 311
>Os01g0194300 Similar to NPR1
Length = 582
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 136/269 (50%), Gaps = 35/269 (13%)
Query: 8 QKQLAGMVEKASIEDVMKVLMASR--KQDLHQLWTTCSHLVAKSGLPPEVLAKHLPIDVV 65
Q++L +++K +++++ +L + + +L C +V +S L L K LP DV+
Sbjct: 187 QRRLLDVLDKVEVDNLLLILSVANLCNKSCMKLLERCLDMVVRSNLDMITLEKSLPPDVI 246
Query: 66 AKIDELRLKSMSRRSPFLXXXXXXXXXXXXXXXXXXXXELDDHHKIRRMRRALDSSDVEL 125
+I + RL S+ SP + H +RR+ RALDS DVEL
Sbjct: 247 KQIIDARL-SLGLISP-------------------ENKGFPNKH-VRRIHRALDSDDVEL 285
Query: 126 VKLMVMGEGLNLDDALALHYAVENCSREVVKALLELGAADVNHPAGPAGKTPLHVAAEMV 185
V++++ NLDDA ALHYAVE+C ++ LL+L ADVNH P G T LH+AA
Sbjct: 286 VRMLLTEGQTNLDDAFALHYAVEHCDSKITTELLDLALADVNH-RNPRGYTVLHIAARRR 344
Query: 186 CPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSDFLFKGAVPGLAHIEPN-KLRLCLEL 244
P ++ LL A P T DG + I + LT + G +P+ K RLC+E+
Sbjct: 345 EPKIIVSLLTKGARPADVTFDGRKAVQISKRLTKQGDYFGVT---EEGKPSPKDRLCIEI 401
Query: 245 VQSAAMVMSREDAQ--TAAVNAAPIYGES 271
++ A R D Q A+V+ A + GES
Sbjct: 402 LEQA----ERRDPQLGEASVSLA-MAGES 425
>Os01g0767900 Similar to Ankyrin repeat BTB/POZ domain-containing protein
Length = 635
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 124/257 (48%), Gaps = 27/257 (10%)
Query: 8 QKQLAGMVEKASIEDVMKVLMASRKQDLHQLWTTCSHLVAKSGLPPEVLAKHLPIDVVAK 67
Q++L V+K +EDV+ +L + +L + C +A+S L L K LP +V +
Sbjct: 234 QRRLLNFVDKTLVEDVLPILQVAFHSELTPVLEKCIRRIARSNLDNVSLDKELPPEVAVQ 293
Query: 68 IDELRLKSMSRRSPFLXXXXXXXXXXXXXXXXXXXXELDDHHKIRRMRRALDSSDVELVK 127
I E+R KS + ++RR+ RALDS DVELVK
Sbjct: 294 IKEIRQKSQPNEGDTVISDPVH------------------EKRVRRIHRALDSDDVELVK 335
Query: 128 LMVMGEGLNLDDALALHYAVENCSREVVKALLELGAADVNHPAGPAGKTPLHVAAEMVCP 187
L++ + LDDA ALHYA C +VV LL+L A++N G T LH+AA P
Sbjct: 336 LLLNESEITLDDANALHYAAAYCDSKVVSELLDLRLANLNL-KNSRGYTALHLAAMRREP 394
Query: 188 DMVAVLLDHHADPNVRTVDGVTPLDILRTLT--SDFLFKGAVPGLAHIEPNKLRLCLELV 245
++ LL+ A + T DG + + I R LT D+ K E NK RLC++++
Sbjct: 395 AIIMCLLNKGAAVSQLTADGQSAMSICRRLTRMKDYNTKME----QGQESNKDRLCIDIL 450
Query: 246 QSAAMV--MSREDAQTA 260
+ M+ ED+ T+
Sbjct: 451 DREMIRKPMAVEDSVTS 467
>Os03g0667100 BTB domain containing protein
Length = 573
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 105/216 (48%), Gaps = 26/216 (12%)
Query: 7 VQKQLAGMVEKASIEDVMKVLMASRKQDLHQLWTTCSHLVAKSGLPPEVLAKHLPIDVVA 66
Q++L+ V KA ED++ +L+ + L +L C VA S L L K LP D+ A
Sbjct: 179 FQRRLSDFVNKALAEDILPILVVASTCHLPELLNQCIQRVANSNLDNRYLEKRLPDDLYA 238
Query: 67 KIDELRLKSMSRRSPFLXXXXXXXXXXXXXXXXXXXXELDDHH--KIRRMRRALDSSDVE 124
K+ E R+ LD H ++R + +ALDS DV+
Sbjct: 239 KLKEFRVPDEPHSGI-----------------------LDPEHEKRVRNIHKALDSDDVD 275
Query: 125 LVKLMVMGEGLNLDDALALHYAVENCSREVVKALLELGAADVNHPAGPAGKTPLHVAAEM 184
LV +++ + LDDA A+HYA C +V+ LL+L +A+VN +G TPLH+A
Sbjct: 276 LVGMLLKESPVTLDDAFAIHYAAAYCEPKVLAELLKLESANVNL-KNSSGYTPLHMACMR 334
Query: 185 VCPDMVAVLLDHHADPNVRTVDGVTPLDILRTLTSD 220
PD++ L++ A RT DG L I + LT +
Sbjct: 335 REPDIIVSLIEKGASVLERTQDGRDALTICKRLTRE 370
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.319 0.133 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,723,014
Number of extensions: 350309
Number of successful extensions: 1031
Number of sequences better than 1.0e-10: 6
Number of HSP's gapped: 1024
Number of HSP's successfully gapped: 6
Length of query: 337
Length of database: 17,035,801
Length adjustment: 101
Effective length of query: 236
Effective length of database: 11,762,187
Effective search space: 2775876132
Effective search space used: 2775876132
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 156 (64.7 bits)