Os03g0667100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : BTB domain containing protein.
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Os03g0667100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : BTB domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 270.42 | 0.773 | 8.43 | -0.708 | 0.657 | -0.877 | 0.149 | -2.55 | 0.305 | 13 | 31.82 | 661 | -- | -- |
| 270.84 | 0.766 | 8.41 | -0.527 | 0.64 | -1.06 | 0.108 | -- | 0.331 | 12.7 | 31.86 | 661 | -- | -- |
| 270.5 | 0.766 | 8.43 | -0.7 | 0.657 | -0.88 | -- | -2.52 | 0.307 | 13 | 31.95 | 661 | -- | -- |
| 270.61 | 0.766 | 8.41 | -0.516 | 0.656 | -1.16 | -- | -- | 0.305 | 13 | 32 | 661 | -- | -- |
| 295.51 | 0.801 | 8.45 | -0.726 | -- | -0.897 | -- | -2.43 | 0.273 | -- | 31.51 | 756 | -- | -- |
| 298.37 | 0.81 | 8.38 | -0.672 | 0.721 | -- | 0.445 | -- | 0.394 | 11.1 | -- | -- | -- | -- |
| 299.17 | 0.81 | 8.38 | -0.653 | 0.718 | -- | -- | -- | 0.396 | 11.3 | -- | -- | -- | -- |
| 295.64 | 0.801 | 8.42 | -0.514 | -- | -1.16 | -- | -- | 0.273 | -- | 31.52 | 756 | -- | -- |
| 277.54 | 0.776 | 8.4 | -- | 0.655 | -1.22 | -- | -- | 0.354 | 13.1 | 31.8 | 691 | -- | -- |
| 331.43 | 0.851 | 8.4 | -0.671 | -- | -- | -- | -- | 0.39 | -- | -- | -- | -- | -- |
| 310.41 | 0.824 | 8.36 | -- | 0.725 | -- | -- | -- | 0.469 | 11.3 | -- | -- | -- | -- |
| 302.32 | 0.81 | 8.41 | -- | -- | -1.22 | -- | -- | 0.314 | -- | 31.1 | 775 | -- | -- |
| 343.29 | 0.865 | 8.38 | -- | -- | -- | -- | -- | 0.464 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 263.66 | humidity | 70.0 | 90 | > th | dose dependent | sin | 3 | NA |
| 2 | 263.92 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 7 | 5 |
| 3 | 264.01 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 4 | 264.02 | temperature | 30.0 | 270 | < th | dose independent | rect. | 15 | 12 |
| 6 | 264.40 | humidity | 80.0 | 90 | > th | dose independent | sin | 3 | NA |
| 7 | 264.40 | humidity | 70.0 | 90 | > th | dose dependent | rect. | 5 | 12 |
| 8 | 264.49 | wind | 9.0 | 43200 | > th | dose independent | rect. | 15 | 3 |
| 13 | 264.83 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 14 | 264.90 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 16 | 264.97 | wind | 9.0 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 20 | 265.00 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 24 | 7 |
| 56 | 265.34 | humidity | 70.0 | 270 | > th | dose dependent | rect. | 2 | 14 |
| 63 | 265.39 | humidity | 70.0 | 10 | > th | dose dependent | rect. | 6 | 10 |
| 65 | 265.41 | temperature | 25.0 | 270 | > th | dose dependent | rect. | 7 | 3 |
| 71 | 265.46 | humidity | 80.0 | 90 | > th | dose independent | rect. | 5 | 12 |
| 76 | 265.50 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 24 | 1 |
| 117 | 265.81 | humidity | 80.0 | 90 | < th | dose independent | sin | 4 | NA |
| 121 | 265.82 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 6 | 1 |
| 129 | 265.85 | atmosphere | 1015.0 | 14400 | < th | dose dependent | rect. | 24 | 7 |
| 166 | 265.99 | atmosphere | 1000.0 | 14400 | > th | dose dependent | sin | 8 | NA |
| 218 | 266.13 | humidity | 80.0 | 90 | > th | dose independent | rect. | 3 | 14 |
| 399 | 266.70 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 411 | 266.72 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 443 | 266.80 | atmosphere | 1015.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 521 | 266.97 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 9 | 1 |
| 551 | 267.03 | humidity | 80.0 | 30 | < th | dose independent | rect. | 24 | 17 |
| 585 | 267.09 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 3 |
| 604 | 267.13 | atmosphere | 1010.0 | 14400 | > th | dose independent | rect. | 24 | 9 |
| 631 | 267.17 | humidity | 80.0 | 30 | < th | dose independent | rect. | 6 | 11 |
| 677 | 267.23 | atmosphere | 1000.0 | 14400 | > th | dose dependent | no | NA | NA |
| 693 | 267.26 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 9 | 23 |
| 733 | 267.32 | atmosphere | 1000.0 | 14400 | > th | dose dependent | rect. | 3 | 23 |
| 801 | 267.43 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 24 | 9 |
| 821 | 267.45 | atmosphere | 1010.0 | 14400 | < th | dose independent | rect. | 24 | 7 |
| 985 | 267.68 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 17 | 4 |