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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os11g0141900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : BTB domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 2.95 (0.0206) R2 : 0.023
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.142 (0.0434) R2dN8 : 0.0297 R2N8 : 0.023
σ : 0.389
deviance : 69.32
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = atmosphere, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
54.71 0.348 2.94 -0.345 0.139 0.419 -0.711 -0.929 0.158 4.04 1012 3554 -- --
56.7 0.351 2.94 -0.47 0.137 0.424 -0.601 -- 0.136 3.95 1012 3482 -- --
56.11 0.349 2.94 -0.36 0.137 0.422 -- -0.86 0.155 4.6 1012 3519 -- --
57.78 0.354 2.95 -0.487 0.136 0.444 -- -- 0.127 4.49 1012 3452 -- --
57.09 0.352 2.94 -0.362 -- 0.413 -- -0.859 0.155 -- 1012 3495 -- --
60.01 0.363 2.96 -0.545 0.121 -- -0.606 -- 0.0766 4.05 -- -- -- --
61.03 0.366 2.96 -0.538 0.122 -- -- -- 0.08 4.75 -- -- -- --
58.75 0.357 2.95 -0.489 -- 0.432 -- -- 0.128 -- 1012 3448 -- --
62.8 0.369 2.93 -- 0.12 0.383 -- -- 0.216 5.32 1011 7269 -- --
61.81 0.367 2.96 -0.533 -- -- -- -- 0.0831 -- -- -- -- --
68.65 0.388 2.94 -- 0.112 -- -- -- 0.14 4.89 -- -- -- --
63.56 0.371 2.93 -- -- 0.376 -- -- 0.219 -- 1011 7316 -- --
69.32 0.389 2.95 -- -- -- -- -- 0.142 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 52.39 wind 9.0 10 < th dose independent rect. 3 23
2 52.74 temperature 10.0 30 > th dose dependent rect. 3 23
6 53.25 temperature 25.0 90 > th dose dependent rect. 1 3
7 53.31 temperature 25.0 90 > th dose independent rect. 1 3
9 53.43 atmosphere 1005.0 10 > th dose dependent rect. 2 1
12 53.54 atmosphere 1005.0 10 > th dose independent rect. 2 1
14 53.58 wind 3.0 30 < th dose independent rect. 2 1
16 53.61 temperature 15.0 30 > th dose independent rect. 3 23
22 53.62 wind 5.0 30 < th dose dependent rect. 2 1
29 53.64 temperature 10.0 30 > th dose independent rect. 2 1
31 53.64 temperature 30.0 30 < th dose independent rect. 2 1
32 53.64 humidity 50.0 30 > th dose independent rect. 2 1
35 53.64 atmosphere 995.0 30 > th dose independent rect. 2 1
36 53.64 atmosphere 1010.0 30 < th dose independent rect. 2 1
38 53.64 radiation 1.0 30 < th dose independent rect. 2 1
43 53.64 precipitation 0.1 30 < th dose independent rect. 2 1
45 53.64 radiation 1.0 30 < th dose dependent rect. 2 1
50 53.64 radiation 1.0 43200 < th dose dependent rect. 3 1
51 53.64 precipitation 0.1 30 < th dose dependent rect. 2 1
54 53.65 temperature 10.0 30 > th dose dependent rect. 2 1
57 53.65 temperature 30.0 30 < th dose dependent rect. 2 1
58 53.67 humidity 50.0 30 > th dose dependent rect. 2 1
66 53.72 atmosphere 1015.0 30 < th dose dependent rect. 2 1
67 53.73 wind 1.0 30 > th dose independent rect. 2 1
114 53.96 atmosphere 995.0 30 > th dose independent rect. 3 23
115 53.98 precipitation 0.1 30 < th dose independent rect. 3 23
116 53.98 precipitation 0.1 30 < th dose dependent rect. 3 23
124 54.10 wind 9.0 30 < th dose dependent rect. 3 23
136 54.20 wind 9.0 1440 < th dose independent rect. 3 1
137 54.20 temperature 10.0 1440 > th dose independent rect. 3 1
140 54.20 temperature 30.0 1440 < th dose independent rect. 3 1
144 54.20 humidity 50.0 1440 > th dose independent rect. 3 1
153 54.20 atmosphere 995.0 1440 > th dose independent rect. 3 1
154 54.20 radiation 1.0 1440 < th dose independent rect. 3 1
174 54.20 temperature 10.0 1440 > th dose independent rect. 4 23
177 54.20 radiation 1.0 1440 < th dose dependent rect. 3 1
197 54.45 temperature 15.0 10 > th dose dependent rect. 6 20
201 54.60 atmosphere 1005.0 270 > th dose dependent rect. 23 4
222 55.05 atmosphere 1015.0 4320 < th dose independent rect. 20 1
225 55.06 atmosphere 1015.0 4320 > th dose independent rect. 20 2
228 55.08 atmosphere 1010.0 30 < th dose independent rect. 3 23
236 55.18 temperature 25.0 10 < th dose dependent rect. 5 14
238 55.21 temperature 25.0 90 < th dose dependent rect. 4 15
288 55.48 temperature 20.0 90 > th dose independent rect. 6 9
289 55.48 temperature 25.0 10 < th dose independent rect. 5 22
302 55.52 temperature 10.0 270 > th dose dependent rect. 3 10
309 55.55 atmosphere 1015.0 1440 < th dose independent rect. 3 1
318 55.60 temperature 20.0 270 > th dose independent rect. 3 10
333 55.68 atmosphere 1010.0 4320 > th dose dependent rect. 21 1
341 55.70 temperature 25.0 30 > th dose independent rect. 5 23
342 55.70 temperature 30.0 10 < th dose dependent rect. 2 16
343 55.71 temperature 25.0 30 > th dose independent rect. 5 21
349 55.72 humidity 50.0 30 > th dose independent rect. 3 23
360 55.74 atmosphere 1010.0 4320 > th dose dependent rect. 19 3
376 55.78 temperature 15.0 30 > th dose dependent rect. 6 17
395 55.85 atmosphere 1010.0 4320 > th dose dependent rect. 9 1
405 55.87 temperature 15.0 10 > th dose dependent rect. 6 8
425 55.90 atmosphere 1010.0 4320 > th dose dependent rect. 8 14
428 55.91 humidity 90.0 90 < th dose independent rect. 3 12
450 55.94 humidity 50.0 43200 < th dose independent rect. 6 4
457 55.95 atmosphere 1015.0 4320 < th dose independent rect. 6 18
472 55.96 temperature 25.0 30 < th dose independent rect. 15 21
475 55.96 atmosphere 1010.0 4320 > th dose dependent rect. 11 1
483 55.97 atmosphere 1015.0 4320 < th dose independent sin 13 NA
486 55.97 humidity 90.0 30 < th dose independent rect. 6 8
490 55.97 atmosphere 1015.0 4320 > th dose independent rect. 6 18
494 55.97 temperature 25.0 30 > th dose independent rect. 22 23
513 55.98 temperature 10.0 30 > th dose dependent rect. 3 11
520 55.99 atmosphere 1015.0 4320 > th dose independent sin 13 NA
567 56.01 atmosphere 1015.0 4320 < th dose independent rect. 18 13
583 56.02 atmosphere 1015.0 4320 > th dose independent rect. 18 11
586 56.02 atmosphere 1015.0 4320 > th dose independent rect. 18 13
593 56.02 atmosphere 1010.0 4320 > th dose dependent sin 20 NA
613 56.03 temperature 20.0 90 < th dose independent rect. 4 15
635 56.04 humidity 50.0 43200 < th dose independent rect. 20 14
652 56.04 humidity 70.0 14400 < th dose dependent rect. 18 2
673 56.05 temperature 25.0 30 > th dose independent rect. 8 23
691 56.05 atmosphere 1015.0 4320 > th dose dependent rect. 19 17
693 56.06 temperature 25.0 30 > th dose independent no NA NA
704 56.06 temperature 25.0 30 > th dose independent rect. 3 23
721 56.07 humidity 50.0 43200 > th dose independent rect. 5 5
781 56.08 temperature 25.0 30 > th dose independent rect. 17 23
871 56.11 atmosphere 1015.0 4320 > th dose independent rect. 18 20
872 56.11 atmosphere 1015.0 4320 < th dose independent rect. 18 20
878 56.11 temperature 25.0 10 < th dose independent rect. 22 22
914 56.12 wind 7.0 10 < th dose independent rect. 6 20
943 56.13 humidity 60.0 14400 > th dose independent rect. 18 2
945 56.13 humidity 50.0 43200 > th dose independent rect. 23 11
994 56.14 atmosphere 1015.0 4320 < th dose independent no NA NA
995 56.14 humidity 50.0 43200 > th dose independent rect. 1 9