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Os01g0767900

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Ankyrin repeat BTB/POZ domain-containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.9 (0.0174) R2 : 0.158
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.338 (0.0366) R2dN8 : 0.204 R2N8 : 0.158
σ : 0.327
deviance : 49.16
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
25.95 0.239 13.9 0.129 0.284 -1.07 -0.53 -0.79 0.183 11.5 23.6 3546 -- --
26.48 0.24 14 0.0206 0.29 -0.907 -0.474 -- 0.155 11.6 24.9 3527 -- --
27.14 0.243 13.9 0.133 0.285 -1.07 -- -0.828 0.189 11.4 23.39 3674 -- --
27.76 0.245 14 0.00929 0.293 -0.906 -- -- 0.156 11.3 25.06 3508 -- --
31.6 0.262 13.9 0.0971 -- -1.1 -- -0.82 0.189 -- 22.95 3195 -- --
39.6 0.295 13.9 0.442 0.242 -- -0.549 -- 0.389 11.3 -- -- -- --
40.89 0.299 13.9 0.42 0.245 -- -- -- 0.387 11.3 -- -- -- --
32.17 0.264 14 0.018 -- -0.88 -- -- 0.157 -- 24.85 3155 -- --
27.76 0.245 14 -- 0.288 -0.909 -- -- 0.156 11.3 25.04 3488 -- --
44.65 0.312 13.9 0.414 -- -- -- -- 0.384 -- -- -- -- --
45.53 0.316 13.9 -- 0.241 -- -- -- 0.34 11.2 -- -- -- --
32.18 0.264 14 -- -- -0.892 -- -- 0.154 -- 24.8 3164 -- --
49.16 0.327 13.9 -- -- -- -- -- 0.338 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 25.69 temperature 20 4320 < th dose independent rect. 22 1
2 25.82 temperature 20 4320 > th dose independent rect. 22 1
3 25.99 temperature 20 4320 < th dose independent rect. 15 13
6 26.01 temperature 20 4320 > th dose independent rect. 15 13
15 26.06 humidity 60 43200 < th dose independent rect. 8 2
16 26.06 humidity 60 43200 < th dose independent rect. 22 12
19 26.09 temperature 20 4320 < th dose independent sin 15 NA
23 26.10 humidity 60 43200 < th dose independent rect. 24 10
40 26.13 temperature 20 4320 > th dose independent sin 15 NA
45 26.14 atmosphere 1015 43200 > th dose independent rect. 11 4
46 26.14 atmosphere 1015 43200 < th dose independent rect. 11 4
49 26.15 atmosphere 1015 43200 < th dose independent rect. 14 1
55 26.16 atmosphere 1015 43200 < th dose independent rect. 13 3
69 26.17 atmosphere 1015 43200 < th dose independent rect. 12 9
82 26.19 atmosphere 1015 43200 > th dose independent rect. 13 1
117 26.22 humidity 60 43200 > th dose independent rect. 22 12
128 26.23 atmosphere 1015 43200 > th dose independent rect. 12 10
173 26.29 atmosphere 1015 43200 < th dose independent rect. 16 5
188 26.31 atmosphere 1015 43200 < th dose independent sin 21 NA
202 26.32 atmosphere 1015 43200 > th dose independent sin 21 NA
235 26.34 wind 1 43200 < th dose dependent rect. 6 1
236 26.34 wind 1 43200 < th dose dependent rect. 23 3
237 26.34 temperature 20 4320 < th dose dependent rect. 21 4
238 26.34 temperature 20 4320 < th dose dependent rect. 20 7
308 26.40 humidity 60 43200 > th dose independent rect. 8 1
400 26.44 atmosphere 1015 43200 < th dose independent rect. 11 17
412 26.44 humidity 60 43200 < th dose dependent rect. 20 17
448 26.45 humidity 60 43200 < th dose dependent sin 8 NA
481 26.46 temperature 20 4320 > th dose independent rect. 6 22
483 26.46 temperature 20 4320 < th dose independent rect. 6 22
490 26.46 atmosphere 1015 43200 > th dose dependent rect. 11 3
493 26.47 radiation 40 43200 < th dose independent rect. 13 1
525 26.47 atmosphere 1015 43200 > th dose dependent rect. 12 1
527 26.47 humidity 60 43200 < th dose dependent rect. 24 13
556 26.48 temperature 20 4320 < th dose independent rect. 1 23
562 26.48 humidity 60 43200 < th dose dependent rect. 2 11
565 26.49 temperature 20 4320 < th dose independent no NA NA
587 26.49 temperature 20 4320 > th dose independent rect. 1 23
593 26.49 humidity 60 43200 < th dose dependent rect. 11 1
594 26.49 atmosphere 1010 43200 > th dose dependent rect. 2 1
595 26.49 atmosphere 1010 43200 > th dose dependent rect. 10 1
599 26.50 temperature 20 4320 > th dose independent no NA NA
638 26.50 temperature 20 4320 < th dose independent rect. 20 23
641 26.50 humidity 60 43200 < th dose dependent rect. 8 2
672 26.51 temperature 20 4320 > th dose independent rect. 20 23
680 26.51 humidity 60 43200 < th dose dependent rect. 24 10
721 26.52 atmosphere 1010 43200 > th dose dependent rect. 18 1
732 26.53 wind 1 43200 < th dose independent rect. 23 3
808 26.54 temperature 20 4320 < th dose dependent rect. 23 1
814 26.54 atmosphere 1010 43200 > th dose dependent rect. 10 9
819 26.55 atmosphere 1015 43200 < th dose independent no NA NA
820 26.55 wind 1 43200 > th dose independent rect. 21 5
867 26.55 atmosphere 1010 43200 > th dose dependent rect. 10 17
908 26.56 humidity 60 43200 < th dose dependent rect. 7 6
926 26.57 atmosphere 1015 43200 > th dose independent no NA NA
951 26.57 atmosphere 1015 43200 < th dose independent rect. 16 23
955 26.57 temperature 25 4320 < th dose dependent rect. 2 1
984 26.58 radiation 10 43200 < th dose independent rect. 12 1