Os01g0948900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Ankyrin repeat containing protein.
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Os01g0948900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Ankyrin repeat containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 134.09 | 0.544 | 7.69 | 3.23 | 0.876 | -2.06 | 0.112 | 5.09 | 0.613 | 14.2 | 24.52 | 1448 | -- | -- |
| 140.16 | 0.551 | 7.82 | 2.15 | 0.955 | -1.82 | 0.202 | -- | 0.502 | 14.2 | 21.07 | 6047 | -- | -- |
| 134.12 | 0.539 | 7.69 | 3.23 | 0.878 | -2.06 | -- | 5.07 | 0.618 | 14.2 | 24.42 | 1451 | -- | -- |
| 139.85 | 0.551 | 7.81 | 2.16 | 0.955 | -1.88 | -- | -- | 0.493 | 14.2 | 20.25 | 6010 | -- | -- |
| 168.36 | 0.604 | 7.64 | 3.58 | -- | -2.36 | -- | 5.62 | 0.793 | -- | 22.77 | 2567 | -- | -- |
| 244.25 | 0.733 | 7.93 | 1.21 | 0.999 | -- | 0.196 | -- | -0.00783 | 14.2 | -- | -- | -- | -- |
| 244.39 | 0.732 | 7.93 | 1.21 | 0.998 | -- | -- | -- | -0.00679 | 14.2 | -- | -- | -- | -- |
| 179.66 | 0.624 | 7.75 | 2.62 | -- | -2.74 | -- | -- | 0.77 | -- | 11.7 | 8280 | -- | -- |
| 224.48 | 0.698 | 7.92 | -- | 0.783 | -1.29 | -- | -- | 0.052 | 14.6 | 22.6 | 2487 | -- | -- |
| 303.93 | 0.815 | 7.94 | 1.17 | -- | -- | -- | -- | -0.0307 | -- | -- | -- | -- | -- |
| 283.24 | 0.787 | 7.96 | -- | 0.975 | -- | -- | -- | -0.142 | 14.1 | -- | -- | -- | -- |
| 257.72 | 0.748 | 7.95 | -- | -- | -1.4 | -- | -- | -0.0934 | -- | 25.39 | 2605 | -- | -- |
| 340.19 | 0.861 | 7.96 | -- | -- | -- | -- | -- | -0.161 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 126.30 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 2 | 126.46 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 6 | 126.59 | radiation | 10 | 14400 | > th | dose dependent | rect. | 17 | 13 |
| 8 | 126.66 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 13 | 126.99 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 14 | 127.14 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 11 |
| 16 | 127.24 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 18 | 127.44 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 1 |
| 28 | 127.66 | radiation | 10 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 41 | 127.77 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 7 |
| 45 | 127.89 | radiation | 1 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 56 | 128.02 | radiation | 1 | 14400 | < th | dose dependent | rect. | 18 | 9 |
| 60 | 128.06 | radiation | 40 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 62 | 128.09 | radiation | 30 | 14400 | > th | dose independent | rect. | 16 | 16 |
| 66 | 128.22 | radiation | 20 | 14400 | < th | dose independent | rect. | 16 | 15 |
| 84 | 128.42 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 13 |
| 101 | 128.82 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 4 |
| 152 | 130.02 | radiation | 30 | 14400 | > th | dose independent | rect. | 7 | 1 |
| 176 | 130.75 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 194 | 131.15 | humidity | 70 | 14400 | < th | dose independent | rect. | 19 | 2 |
| 208 | 131.40 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 15 |
| 259 | 131.95 | radiation | 30 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 279 | 132.18 | temperature | 20 | 1440 | > th | dose dependent | sin | 22 | NA |
| 298 | 132.30 | humidity | 90 | 43200 | > th | dose independent | rect. | 9 | 1 |
| 372 | 132.73 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 450 | 133.01 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 4 |
| 457 | 133.04 | radiation | 1 | 14400 | < th | dose dependent | sin | 14 | NA |
| 470 | 133.10 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 6 |
| 480 | 133.19 | humidity | 90 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 491 | 133.24 | radiation | 1 | 14400 | < th | dose dependent | rect. | 7 | 12 |
| 494 | 133.25 | radiation | 1 | 14400 | < th | dose dependent | rect. | 7 | 16 |
| 507 | 133.32 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 3 |
| 512 | 133.37 | radiation | 1 | 14400 | < th | dose dependent | rect. | 7 | 22 |
| 546 | 133.53 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 1 |
| 547 | 133.53 | radiation | 1 | 14400 | < th | dose dependent | rect. | 7 | 20 |
| 574 | 133.60 | humidity | 90 | 43200 | < th | dose independent | rect. | 9 | 2 |
| 578 | 133.63 | wind | 9 | 43200 | > th | dose dependent | rect. | 19 | 11 |
| 590 | 133.69 | wind | 5 | 43200 | > th | dose independent | rect. | 5 | 10 |
| 601 | 133.74 | wind | 5 | 43200 | > th | dose independent | rect. | 4 | 12 |
| 604 | 133.75 | humidity | 90 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 612 | 133.78 | wind | 5 | 43200 | > th | dose dependent | rect. | 19 | 21 |
| 620 | 133.81 | wind | 5 | 43200 | < th | dose independent | rect. | 5 | 10 |
| 633 | 133.88 | wind | 7 | 43200 | > th | dose independent | rect. | 19 | 20 |
| 636 | 133.90 | radiation | 1 | 14400 | < th | dose independent | sin | 13 | NA |
| 649 | 133.91 | wind | 5 | 43200 | < th | dose independent | rect. | 3 | 13 |
| 654 | 133.93 | wind | 7 | 43200 | < th | dose independent | rect. | 19 | 21 |
| 757 | 134.21 | wind | 5 | 43200 | > th | dose dependent | rect. | 5 | 10 |
| 810 | 134.35 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 825 | 134.39 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 842 | 134.44 | wind | 5 | 43200 | < th | dose independent | rect. | 24 | 16 |
| 844 | 134.44 | temperature | 25 | 1440 | > th | dose dependent | rect. | 14 | 23 |
| 854 | 134.48 | radiation | 1 | 14400 | > th | dose independent | sin | 13 | NA |
| 857 | 134.48 | wind | 5 | 43200 | > th | dose dependent | rect. | 24 | 16 |
| 876 | 134.53 | wind | 5 | 43200 | > th | dose independent | rect. | 24 | 16 |
| 891 | 134.59 | radiation | 1 | 14400 | < th | dose independent | rect. | 7 | 20 |
| 898 | 134.60 | radiation | 1 | 14400 | < th | dose independent | rect. | 7 | 18 |
| 912 | 134.63 | radiation | 1 | 14400 | < th | dose independent | rect. | 7 | 12 |
| 922 | 134.65 | wind | 9 | 43200 | < th | dose independent | rect. | 19 | 4 |
| 926 | 134.67 | humidity | 90 | 43200 | > th | dose dependent | rect. | 19 | 4 |
| 941 | 134.70 | radiation | 1 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 942 | 134.70 | wind | 9 | 43200 | > th | dose independent | rect. | 19 | 11 |
| 947 | 134.71 | radiation | 1 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 985 | 134.83 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 3 |
| 986 | 134.83 | humidity | 90 | 43200 | < th | dose independent | rect. | 20 | 3 |